RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 LIPFP07098 398 aa14.94□□□□□ -0.02
SHMT2-206ENST00000553529 IL13RA1P78552 427 aa14.94□□□□□ -0.02
SHMT2-206ENST00000553529 LRRC10Q5BKY1 277 aa14.94□□□□□ -0.02
SHMT2-206ENST00000553529 CLVS2Q5SYC1 327 aa14.94□□□□□ -0.02
SHMT2-206ENST00000553529 CCDC121Q6ZUS5 278 aa14.94□□□□□ -0.02
SHMT2-206ENST00000553529 POC1AQ8NBT0 407 aa14.94□□□□□ -0.02
SHMT2-206ENST00000553529 OR4M1Q8NGD0 313 aa14.94□□□□□ -0.02
SHMT2-206ENST00000553529 OR8J1Q8NGP2 316 aa14.94□□□□□ -0.02
SHMT2-206ENST00000553529 GATAD2BQ8WXI9 593 aa14.94□□□□□ -0.02
SHMT2-206ENST00000553529 RNFT2Q96EX2 444 aa14.94□□□□□ -0.02
SHMT2-206ENST00000553529 OR5B21A6NL26 309 aa14.93□□□□□ -0.02
SHMT2-206ENST00000553529 CLDN34H7C241 214 aa14.93□□□□□ -0.02
SHMT2-206ENST00000553529 OR2T7P0C7T2 308 aa14.93□□□□□ -0.02
SHMT2-206ENST00000553529 PGA5P0DJD9 388 aa14.93□□□□□ -0.02
SHMT2-206ENST00000553529 CCL1P22362 96 aa14.93□□□□□ -0.02
SHMT2-206ENST00000553529 OR12D2P58182 307 aa14.93□□□□□ -0.02
SHMT2-206ENST00000553529 KRTAP10-3P60369 221 aa14.93□□□□□ -0.02
SHMT2-206ENST00000553529 ISL1P61371 349 aa14.93□□□□□ -0.02
SHMT2-206ENST00000553529 SNCBQ16143 134 aa14.93□□□□□ -0.02
SHMT2-206ENST00000553529 HIST2H2BDQ6DRA6 164 aa14.93□□□□□ -0.02
SHMT2-206ENST00000553529 C16orf87Q6PH81 154 aa14.93□□□□□ -0.02
SHMT2-206ENST00000553529 Q6ZSR3 168 aa14.93□□□□□ -0.02
SHMT2-206ENST00000553529 FAM185AQ8N0U4 392 aa14.93□□□□□ -0.02
SHMT2-206ENST00000553529 OR2T27Q8NH04 317 aa14.93□□□□□ -0.02
SHMT2-206ENST00000553529 MOB1AQ9H8S9 216 aa14.93□□□□□ -0.02
SHMT2-206ENST00000553529 ABCB9Q9NP78 766 aa14.93□□□□□ -0.02
SHMT2-206ENST00000553529 USE1Q9NZ43 259 aa14.93□□□□□ -0.02
SHMT2-206ENST00000553529 OR14J1Q9UGF5 321 aa14.93□□□□□ -0.02
SHMT2-206ENST00000553529 KPTNQ9Y664 436 aa14.93□□□□□ -0.02
SHMT2-206ENST00000553529 LOC107986453A0A1B0GWG9 222 aa14.92□□□□□ -0.02
SHMT2-206ENST00000553529 A0A1W2PQ09 198 aa14.92□□□□□ -0.02
SHMT2-206ENST00000553529 ANKRD61A6NGH8 418 aa14.92□□□□□ -0.02
SHMT2-206ENST00000553529 J3QRE1 110 aa14.92□□□□□ -0.02
SHMT2-206ENST00000553529 J3QT63 122 aa14.92□□□□□ -0.02
SHMT2-206ENST00000553529 MTRF1O75570 445 aaKnown RBP14.92□□□□□ -0.02
SHMT2-206ENST00000553529 ECDO95905 644 aaPredicted RBP14.92□□□□□ -0.02
SHMT2-206ENST00000553529 CCL3L1P16619 93 aa14.92□□□□□ -0.02
SHMT2-206ENST00000553529 GABRB1P18505 474 aa14.92□□□□□ -0.02
SHMT2-206ENST00000553529 ATP6V1E1P36543 226 aa14.92□□□□□ -0.02
SHMT2-206ENST00000553529 PDCD1Q15116 288 aa14.92□□□□□ -0.02
SHMT2-206ENST00000553529 TAF9Q16594 264 aa14.92□□□□□ -0.02
SHMT2-206ENST00000553529 KIR3DL3Q8N743 410 aa14.92□□□□□ -0.02
SHMT2-206ENST00000553529 OR51A4Q8NGJ6 313 aa14.92□□□□□ -0.02
SHMT2-206ENST00000553529 C8orf46Q8TAG6 207 aa14.92□□□□□ -0.02
SHMT2-206ENST00000553529 SLAMF9Q96A28 289 aa14.92□□□□□ -0.02
SHMT2-206ENST00000553529 ADAT3Q96EY9 351 aaPredicted RBP14.92□□□□□ -0.02
SHMT2-206ENST00000553529 HRASLS5Q96KN8 279 aa14.92□□□□□ -0.02
SHMT2-206ENST00000553529 MNTQ99583 582 aa14.92□□□□□ -0.02
SHMT2-206ENST00000553529 NRIP2Q9BQI9 281 aa14.92□□□□□ -0.02
SHMT2-206ENST00000553529 AMBNQ9NP70 447 aa14.92□□□□□ -0.02
SHMT2-206ENST00000553529 C1RLQ9NZP8 487 aa14.92□□□□□ -0.02
SHMT2-206ENST00000553529 IGKV1-9A0A0C4DH69 117 aa14.91□□□□□ -0.02
SHMT2-206ENST00000553529 DLGAP1O14490 977 aa14.91□□□□□ -0.02
SHMT2-206ENST00000553529 SYT7O43581 403 aa14.91□□□□□ -0.02
SHMT2-206ENST00000553529 PIPP12273 146 aaPredicted RBP14.91□□□□□ -0.02
SHMT2-206ENST00000553529 ATP6V1B1P15313 513 aa14.91□□□□□ -0.02
SHMT2-206ENST00000553529 ALDH3A2P51648 485 aa14.91□□□□□ -0.02
SHMT2-206ENST00000553529 CAPZA1P52907 286 aa14.91□□□□□ -0.02
SHMT2-206ENST00000553529 CDC42P60953 191 aa14.91□□□□□ -0.02
SHMT2-206ENST00000553529 FOXL1Q12952 345 aa14.91□□□□□ -0.02
SHMT2-206ENST00000553529 ZNF273Q14593 569 aa14.91□□□□□ -0.02
SHMT2-206ENST00000553529 ZBTB37Q5TC79 503 aa14.91□□□□□ -0.02
SHMT2-206ENST00000553529 ENTHD1Q8IYW4 607 aa14.91□□□□□ -0.02
SHMT2-206ENST00000553529 ZNF671Q8TAW3 534 aa14.91□□□□□ -0.02
SHMT2-206ENST00000553529 ZNF747Q9BV97 191 aa14.91□□□□□ -0.02
SHMT2-206ENST00000553529 IMPAD1Q9NX62 359 aa14.91□□□□□ -0.02
SHMT2-206ENST00000553529 MTCH1Q9NZJ7 389 aa14.91□□□□□ -0.02
SHMT2-206ENST00000553529 FRRS1LQ9P0K9 344 aa14.91□□□□□ -0.02
SHMT2-206ENST00000553529 MYRFQ9Y2G1 1151 aa14.91□□□□□ -0.02
SHMT2-206ENST00000553529 A0A1B0GVI7 797 aa14.9□□□□□ -0.02
SHMT2-206ENST00000553529 PRDX2P32119 198 aa14.9□□□□□ -0.02
SHMT2-206ENST00000553529 MKXQ8IYA7 352 aa14.9□□□□□ -0.02
SHMT2-206ENST00000553529 LGALS12Q96DT0 336 aa14.9□□□□□ -0.02
SHMT2-206ENST00000553529 SDSLQ96GA7 329 aa14.9□□□□□ -0.02
SHMT2-206ENST00000553529 AJUBAQ96IF1 538 aa14.9□□□□□ -0.02
SHMT2-206ENST00000553529 ISG20L2Q9H9L3 353 aaKnown RBP14.9□□□□□ -0.02
SHMT2-206ENST00000553529 HES4Q9HCC6 221 aa14.9□□□□□ -0.02
SHMT2-206ENST00000553529 S100A14Q9HCY8 104 aa14.9□□□□□ -0.02
SHMT2-206ENST00000553529 ENOPH1Q9UHY7 261 aa14.9□□□□□ -0.02
SHMT2-206ENST00000553529 NBEAL1Q6ZS30 2694 aa14.89□□□□□ -0.03
SHMT2-206ENST00000553529 NPFFO15130 113 aa14.89□□□□□ -0.03
SHMT2-206ENST00000553529 NXPH2O95156 264 aa14.89□□□□□ -0.03
SHMT2-206ENST00000553529 SAA4P35542 130 aa14.89□□□□□ -0.03
SHMT2-206ENST00000553529 IER3P46695 156 aa14.89□□□□□ -0.03
SHMT2-206ENST00000553529 SNU13P55769 128 aaKnown RBP14.89□□□□□ -0.03
SHMT2-206ENST00000553529 CAV3P56539 151 aa14.89□□□□□ -0.03
SHMT2-206ENST00000553529 ERVK11-1P61568 191 aa14.89□□□□□ -0.03
SHMT2-206ENST00000553529 ZNF91Q05481 1191 aa14.89□□□□□ -0.03
SHMT2-206ENST00000553529 C11orf42Q8N5U0 333 aa14.89□□□□□ -0.03
SHMT2-206ENST00000553529 OR2G2Q8NGZ5 317 aa14.89□□□□□ -0.03
SHMT2-206ENST00000553529 APH1BQ8WW43 257 aa14.89□□□□□ -0.03
SHMT2-206ENST00000553529 RFT1Q96AA3 541 aa14.89□□□□□ -0.03
SHMT2-206ENST00000553529 MED30Q96HR3 178 aa14.89□□□□□ -0.03
SHMT2-206ENST00000553529 SPACA5Q96QH8 159 aa14.89□□□□□ -0.03
SHMT2-206ENST00000553529 NKX3-1Q99801 234 aaPredicted RBP14.89□□□□□ -0.03
SHMT2-206ENST00000553529 DNTTIP1Q9H147 329 aa14.89□□□□□ -0.03
SHMT2-206ENST00000553529 ZMAT3Q9HA38 289 aaKnown RBP14.89□□□□□ -0.03
SHMT2-206ENST00000553529 PLEKHA1Q9HB21 404 aa14.89□□□□□ -0.03
SHMT2-206ENST00000553529 E9PI62 339 aa14.88□□□□□ -0.03
SHMT2-206ENST00000553529 GPR137BO60478 399 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms