RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 OR51G2Q8NGK0 314 aa10.44□□□□□ -0.74
LINC00643-202ENST00000553426 TNFRSF14Q92956 283 aa10.44□□□□□ -0.74
LINC00643-202ENST00000553426 TTTY10Q9BZA0 68 aa10.44□□□□□ -0.74
LINC00643-202ENST00000553426 C16orf95Q9H693 158 aa10.44□□□□□ -0.74
LINC00643-202ENST00000553426 HEXA-AS1Q9H8Q6 139 aa10.44□□□□□ -0.74
LINC00643-202ENST00000553426 MAB21L2Q9Y586 359 aa10.44□□□□□ -0.74
LINC00643-202ENST00000553426 SNX5Q9Y5X3 404 aa10.44□□□□□ -0.74
LINC00643-202ENST00000553426 R4GMQ9 66 aa10.44□□□□□ -0.74
LINC00643-202ENST00000553426 RFPL4AA6NLU0 287 aa10.43□□□□□ -0.74
LINC00643-202ENST00000553426 RFPL4AL1F8VTS6 287 aa10.43□□□□□ -0.74
LINC00643-202ENST00000553426 G3V2T6 193 aa10.43□□□□□ -0.74
LINC00643-202ENST00000553426 TSPAN9O75954 239 aa10.43□□□□□ -0.74
LINC00643-202ENST00000553426 NXPH2O95156 264 aa10.43□□□□□ -0.74
LINC00643-202ENST00000553426 IGLV3-1P01715 115 aa10.43□□□□□ -0.74
LINC00643-202ENST00000553426 RASSF2P50749 326 aa10.43□□□□□ -0.74
LINC00643-202ENST00000553426 LGALS4P56470 323 aa10.43□□□□□ -0.74
LINC00643-202ENST00000553426 RPL31P62899 125 aaKnown RBP10.43□□□□□ -0.74
LINC00643-202ENST00000553426 EGR3Q06889 387 aa10.43□□□□□ -0.74
LINC00643-202ENST00000553426 DMRTC1Q5HYR2 192 aa10.43□□□□□ -0.74
LINC00643-202ENST00000553426 ASRGL1Q7L266 308 aa10.43□□□□□ -0.74
LINC00643-202ENST00000553426 GID4Q8IVV7 300 aa10.43□□□□□ -0.74
LINC00643-202ENST00000553426 TCEANCQ8N8B7 351 aa10.43□□□□□ -0.74
LINC00643-202ENST00000553426 DTX3Q8N9I9 347 aa10.43□□□□□ -0.74
LINC00643-202ENST00000553426 POC1AQ8NBT0 407 aa10.43□□□□□ -0.74
LINC00643-202ENST00000553426 BEND2Q8NDZ0 799 aa10.43□□□□□ -0.74
LINC00643-202ENST00000553426 TMEM163Q8TC26 289 aa10.43□□□□□ -0.74
LINC00643-202ENST00000553426 UTP4Q969X6 686 aaKnown RBP10.43□□□□□ -0.74
LINC00643-202ENST00000553426 PLEKHA1Q9HB21 404 aa10.43□□□□□ -0.74
LINC00643-202ENST00000553426 ELL3Q9HB65 397 aaPredicted RBP10.43□□□□□ -0.74
LINC00643-202ENST00000553426 RAB18Q9NP72 206 aa10.43□□□□□ -0.74
LINC00643-202ENST00000553426 CLN6Q9NWW5 311 aa10.43□□□□□ -0.74
LINC00643-202ENST00000553426 ZNF222Q9UK12 451 aa10.43□□□□□ -0.74
LINC00643-202ENST00000553426 OR52A1Q9UKL2 312 aa10.43□□□□□ -0.74
LINC00643-202ENST00000553426 COPS3Q9UNS2 423 aa10.43□□□□□ -0.74
LINC00643-202ENST00000553426 DHRS7CA6NNS2 312 aa10.42□□□□□ -0.74
LINC00643-202ENST00000553426 J3QT63 122 aa10.42□□□□□ -0.74
LINC00643-202ENST00000553426 DYNC1I1O14576 645 aa10.42□□□□□ -0.74
LINC00643-202ENST00000553426 TTRP02766 147 aa10.42□□□□□ -0.74
LINC00643-202ENST00000553426 KRT8P05787 483 aa10.42□□□□□ -0.74
LINC00643-202ENST00000553426 PGA5P0DJD9 388 aa10.42□□□□□ -0.74
LINC00643-202ENST00000553426 FASP25445 335 aa10.42□□□□□ -0.74
LINC00643-202ENST00000553426 PRDX2P32119 198 aa10.42□□□□□ -0.74
LINC00643-202ENST00000553426 DLX1P56177 255 aa10.42□□□□□ -0.74
LINC00643-202ENST00000553426 PROK1P58294 105 aa10.42□□□□□ -0.74
LINC00643-202ENST00000553426 MFGE8Q08431 387 aaPredicted RBP10.42□□□□□ -0.74
LINC00643-202ENST00000553426 ATP6AP1Q15904 470 aa10.42□□□□□ -0.74
LINC00643-202ENST00000553426 PDLIM3Q53GG5 364 aaPredicted RBP10.42□□□□□ -0.74
LINC00643-202ENST00000553426 ASPHD2Q6ICH7 369 aa10.42□□□□□ -0.74
LINC00643-202ENST00000553426 ZDHHC13Q8IUH4 622 aa10.42□□□□□ -0.74
LINC00643-202ENST00000553426 ELMOD2Q8IZ81 293 aa10.42□□□□□ -0.74
LINC00643-202ENST00000553426 PNKDQ8N490 385 aa10.42□□□□□ -0.74
LINC00643-202ENST00000553426 OR2T27Q8NH04 317 aa10.42□□□□□ -0.74
LINC00643-202ENST00000553426 PPP1R14AQ96A00 147 aa10.42□□□□□ -0.74
LINC00643-202ENST00000553426 SLC7A6OSQ96CW6 309 aaPredicted RBP10.42□□□□□ -0.74
LINC00643-202ENST00000553426 IL4I1Q96RQ9 567 aa10.42□□□□□ -0.74
LINC00643-202ENST00000553426 SSX3Q99909 188 aa10.42□□□□□ -0.74
LINC00643-202ENST00000553426 APOL4Q9BPW4 351 aa10.42□□□□□ -0.74
LINC00643-202ENST00000553426 RBM4BQ9BQ04 359 aaKnown RBP10.42□□□□□ -0.74
LINC00643-202ENST00000553426 ADI1Q9BV57 179 aa10.42□□□□□ -0.74
LINC00643-202ENST00000553426 PPA2Q9H2U2 334 aa10.42□□□□□ -0.74
LINC00643-202ENST00000553426 ADGRL4Q9HBW9 690 aa10.42□□□□□ -0.74
LINC00643-202ENST00000553426 GPR173Q9NS66 373 aa10.42□□□□□ -0.74
LINC00643-202ENST00000553426 SLC7A11Q9UPY5 501 aa10.42□□□□□ -0.74
LINC00643-202ENST00000553426 H3BUX3 64 aa10.41□□□□□ -0.74
LINC00643-202ENST00000553426 NOS1APO75052 506 aaPredicted RBP10.41□□□□□ -0.74
LINC00643-202ENST00000553426 FCGR1AP12314 374 aa10.41□□□□□ -0.74
LINC00643-202ENST00000553426 GABRA5P31644 462 aa10.41□□□□□ -0.74
LINC00643-202ENST00000553426 ATP6V1E1P36543 226 aa10.41□□□□□ -0.74
LINC00643-202ENST00000553426 C2orf68Q2NKX9 166 aa10.41□□□□□ -0.74
LINC00643-202ENST00000553426 LRRC75BQ2VPJ9 315 aa10.41□□□□□ -0.74
LINC00643-202ENST00000553426 SLX4IPQ5VYV7 408 aa10.41□□□□□ -0.74
LINC00643-202ENST00000553426 TMEM42Q69YG0 159 aa10.41□□□□□ -0.74
LINC00643-202ENST00000553426 SLC35E4Q6ICL7 350 aa10.41□□□□□ -0.74
LINC00643-202ENST00000553426 C11orf88Q6PI97 169 aa10.41□□□□□ -0.74
LINC00643-202ENST00000553426 BCDIN3DQ7Z5W3 292 aaKnown RBP10.41□□□□□ -0.74
LINC00643-202ENST00000553426 CD177Q8N6Q3 437 aa10.41□□□□□ -0.74
LINC00643-202ENST00000553426 YIPF7Q8N8F6 280 aa10.41□□□□□ -0.74
LINC00643-202ENST00000553426 C19orf12Q9NSK7 152 aa10.41□□□□□ -0.74
LINC00643-202ENST00000553426 USE1Q9NZ43 259 aa10.41□□□□□ -0.74
LINC00643-202ENST00000553426 FBLN5Q9UBX5 448 aa10.41□□□□□ -0.74
LINC00643-202ENST00000553426 OR14J1Q9UGF5 321 aa10.41□□□□□ -0.74
LINC00643-202ENST00000553426 WARS2Q9UGM6 360 aaKnown RBP10.41□□□□□ -0.74
LINC00643-202ENST00000553426 V9GYS6 101 aa10.41□□□□□ -0.74
LINC00643-202ENST00000553426 PQLC2LA1A4F0 135 aa10.4□□□□□ -0.74
LINC00643-202ENST00000553426 ZAR1LA6NP61 321 aa10.4□□□□□ -0.74
LINC00643-202ENST00000553426 PRR32B1ATL7 298 aa10.4□□□□□ -0.74
LINC00643-202ENST00000553426 SYT7O43581 403 aa10.4□□□□□ -0.74
LINC00643-202ENST00000553426 SYNGR1O43759 233 aa10.4□□□□□ -0.74
LINC00643-202ENST00000553426 MITFO75030 526 aaPredicted RBP10.4□□□□□ -0.74
LINC00643-202ENST00000553426 SRSF10O75494 262 aaKnown RBP10.4□□□□□ -0.74
LINC00643-202ENST00000553426 RPP14O95059 124 aaKnown RBP10.4□□□□□ -0.74
LINC00643-202ENST00000553426 SERPINA3P01011 423 aa10.4□□□□□ -0.74
LINC00643-202ENST00000553426 KRTAP10-3P60369 221 aa10.4□□□□□ -0.74
LINC00643-202ENST00000553426 ERVFRD-1P60508 538 aa10.4□□□□□ -0.74
LINC00643-202ENST00000553426 AANATQ16613 207 aa10.4□□□□□ -0.74
LINC00643-202ENST00000553426 AADACL4Q5VUY2 407 aa10.4□□□□□ -0.74
LINC00643-202ENST00000553426 TMEM200BQ69YZ2 307 aa10.4□□□□□ -0.74
LINC00643-202ENST00000553426 KDM4DQ6B0I6 523 aa10.4□□□□□ -0.74
LINC00643-202ENST00000553426 PLEKHG7Q6ZR37 379 aa10.4□□□□□ -0.74
LINC00643-202ENST00000553426 Q6ZTK2 550 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms