RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 GBX2P52951 348 aaPredicted RBP12.71□□□□□ -0.37
SHMT2-204ENST00000553324 FGF12P61328 243 aa12.71□□□□□ -0.37
SHMT2-204ENST00000553324 MED21Q13503 144 aa12.71□□□□□ -0.37
SHMT2-204ENST00000553324 UBE2V2Q15819 145 aa12.71□□□□□ -0.37
SHMT2-204ENST00000553324 SMIM21Q3B7S5 101 aa12.71□□□□□ -0.37
SHMT2-204ENST00000553324 DMRTC1Q5HYR2 192 aa12.71□□□□□ -0.37
SHMT2-204ENST00000553324 KLF17Q5JT82 389 aaPredicted RBP12.71□□□□□ -0.37
SHMT2-204ENST00000553324 PHC2Q8IXK0 858 aa12.71□□□□□ -0.37
SHMT2-204ENST00000553324 DNAAF1Q8NEP3 725 aa12.71□□□□□ -0.37
SHMT2-204ENST00000553324 OR52I1Q8NGK6 324 aa12.71□□□□□ -0.37
SHMT2-204ENST00000553324 APH1BQ8WW43 257 aa12.71□□□□□ -0.37
SHMT2-204ENST00000553324 RNF166Q96A37 237 aaPredicted RBP12.71□□□□□ -0.37
SHMT2-204ENST00000553324 SEH1LQ96EE3 360 aa12.71□□□□□ -0.37
SHMT2-204ENST00000553324 C19orf24Q9BVV8 132 aa12.71□□□□□ -0.37
SHMT2-204ENST00000553324 JAM3Q9BX67 310 aa12.71□□□□□ -0.37
SHMT2-204ENST00000553324 NEK6Q9HC98 313 aa12.71□□□□□ -0.37
SHMT2-204ENST00000553324 FGF20Q9NP95 211 aaPredicted RBP12.71□□□□□ -0.37
SHMT2-204ENST00000553324 SNTG1Q9NSN8 517 aa12.71□□□□□ -0.37
SHMT2-204ENST00000553324 RPUSD1Q9UJJ7 312 aaKnown RBP12.71□□□□□ -0.37
SHMT2-204ENST00000553324 DNHD1Q96M86 4753 aa12.7□□□□□ -0.38
SHMT2-204ENST00000553324 FAM230AA0A1W2PPH8 454 aa12.7□□□□□ -0.38
SHMT2-204ENST00000553324 WBP4O75554 376 aaKnown RBP12.7□□□□□ -0.38
SHMT2-204ENST00000553324 VENTXO95231 258 aa12.7□□□□□ -0.38
SHMT2-204ENST00000553324 CCDC159P0C7I6 412 aa12.7□□□□□ -0.38
SHMT2-204ENST00000553324 PSG2P11465 335 aa12.7□□□□□ -0.38
SHMT2-204ENST00000553324 ZNF20P17024 532 aa12.7□□□□□ -0.38
SHMT2-204ENST00000553324 AMY2BP19961 511 aa12.7□□□□□ -0.38
SHMT2-204ENST00000553324 PRKACBP22694 351 aa12.7□□□□□ -0.38
SHMT2-204ENST00000553324 PEX2P28328 305 aa12.7□□□□□ -0.38
SHMT2-204ENST00000553324 CAV3P56539 151 aa12.7□□□□□ -0.38
SHMT2-204ENST00000553324 NANOS3P60323 173 aaKnown RBP12.7□□□□□ -0.38
SHMT2-204ENST00000553324 IL24Q13007 206 aa12.7□□□□□ -0.38
SHMT2-204ENST00000553324 IKZF1Q13422 519 aa12.7□□□□□ -0.38
SHMT2-204ENST00000553324 PDCD1Q15116 288 aa12.7□□□□□ -0.38
SHMT2-204ENST00000553324 OGFRL1Q5TC84 451 aaPredicted RBP12.7□□□□□ -0.38
SHMT2-204ENST00000553324 GPR157Q5UAW9 335 aa12.7□□□□□ -0.38
SHMT2-204ENST00000553324 TMPRSS11AQ6ZMR5 421 aa12.7□□□□□ -0.38
SHMT2-204ENST00000553324 ACP7Q6ZNF0 438 aa12.7□□□□□ -0.38
SHMT2-204ENST00000553324 C9orf139Q6ZV77 190 aa12.7□□□□□ -0.38
SHMT2-204ENST00000553324 UTS2BQ765I0 119 aa12.7□□□□□ -0.38
SHMT2-204ENST00000553324 FAM216BQ8N7L0 139 aa12.7□□□□□ -0.38
SHMT2-204ENST00000553324 ZNF676Q8N7Q3 588 aa12.7□□□□□ -0.38
SHMT2-204ENST00000553324 LY6G5BQ8NDX9 201 aa12.7□□□□□ -0.38
SHMT2-204ENST00000553324 BORCS8Q96FH0 119 aa12.7□□□□□ -0.38
SHMT2-204ENST00000553324 WDFY2Q96P53 400 aa12.7□□□□□ -0.38
SHMT2-204ENST00000553324 SLC6A7Q99884 636 aa12.7□□□□□ -0.38
SHMT2-204ENST00000553324 COMMD4Q9H0A8 199 aa12.7□□□□□ -0.38
SHMT2-204ENST00000553324 SLC25A10Q9UBX3 287 aaPredicted RBP12.7□□□□□ -0.38
SHMT2-204ENST00000553324 ZNF69Q9UC07 566 aa12.7□□□□□ -0.38
SHMT2-204ENST00000553324 KPTNQ9Y664 436 aa12.7□□□□□ -0.38
SHMT2-204ENST00000553324 TMEM212A6NML5 194 aa12.69□□□□□ -0.38
SHMT2-204ENST00000553324 OR4C45A6NMZ5 311 aa12.69□□□□□ -0.38
SHMT2-204ENST00000553324 ANKRD65E5RJM6 399 aa12.69□□□□□ -0.38
SHMT2-204ENST00000553324 H3BSH0 61 aa12.69□□□□□ -0.38
SHMT2-204ENST00000553324 NXPH2O95156 264 aa12.69□□□□□ -0.38
SHMT2-204ENST00000553324 PLATP00750 562 aa12.69□□□□□ -0.38
SHMT2-204ENST00000553324 OCM2P0CE71 109 aa12.69□□□□□ -0.38
SHMT2-204ENST00000553324 OCMP0CE72 109 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-204ENST00000553324 RBP2P50120 134 aa12.69□□□□□ -0.38
SHMT2-204ENST00000553324 ATP1B3P54709 279 aa12.69□□□□□ -0.38
SHMT2-204ENST00000553324 ARF6P62330 175 aa12.69□□□□□ -0.38
SHMT2-204ENST00000553324 ADARB1P78563 741 aaKnown RBP12.69□□□□□ -0.38
SHMT2-204ENST00000553324 CMTM4Q8IZR5 234 aa12.69□□□□□ -0.38
SHMT2-204ENST00000553324 ZNF561Q8N587 486 aa12.69□□□□□ -0.38
SHMT2-204ENST00000553324 C22orf15Q8WYQ4 148 aa12.69□□□□□ -0.38
SHMT2-204ENST00000553324 FGGYQ96C11 551 aa12.69□□□□□ -0.38
SHMT2-204ENST00000553324 SDSLQ96GA7 329 aa12.69□□□□□ -0.38
SHMT2-204ENST00000553324 GAFA1Q96PS6 74 aa12.69□□□□□ -0.38
SHMT2-204ENST00000553324 NRIP2Q9BQI9 281 aa12.69□□□□□ -0.38
SHMT2-204ENST00000553324 ZNF649Q9BS31 505 aa12.69□□□□□ -0.38
SHMT2-204ENST00000553324 PCGF1Q9BSM1 259 aa12.69□□□□□ -0.38
SHMT2-204ENST00000553324 DCTN5Q9BTE1 182 aa12.69□□□□□ -0.38
SHMT2-204ENST00000553324 ISG20L2Q9H9L3 353 aaKnown RBP12.69□□□□□ -0.38
SHMT2-204ENST00000553324 CHCHD3Q9NX63 227 aaKnown RBP12.69□□□□□ -0.38
SHMT2-204ENST00000553324 CAB39Q9Y376 341 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-204ENST00000553324 DOCK11Q5JSL3 2073 aa12.68□□□□□ -0.38
SHMT2-204ENST00000553324 IGKV1D-17A0A075B6S4 117 aa12.68□□□□□ -0.38
SHMT2-204ENST00000553324 RFPL4AA6NLU0 287 aa12.68□□□□□ -0.38
SHMT2-204ENST00000553324 RFPL4AL1F8VTS6 287 aa12.68□□□□□ -0.38
SHMT2-204ENST00000553324 SLC1A7O00341 560 aa12.68□□□□□ -0.38
SHMT2-204ENST00000553324 SYNGR1O43759 233 aa12.68□□□□□ -0.38
SHMT2-204ENST00000553324 CYB5AP00167 134 aa12.68□□□□□ -0.38
SHMT2-204ENST00000553324 IGHV4-38-2P0DP08 117 aa12.68□□□□□ -0.38
SHMT2-204ENST00000553324 MYL12AP19105 171 aa12.68□□□□□ -0.38
SHMT2-204ENST00000553324 PRDX2P32119 198 aa12.68□□□□□ -0.38
SHMT2-204ENST00000553324 CAPGP40121 348 aa12.68□□□□□ -0.38
SHMT2-204ENST00000553324 SRSF2Q01130 221 aaKnown RBP12.68□□□□□ -0.38
SHMT2-204ENST00000553324 DGUOKQ16854 277 aa12.68□□□□□ -0.38
SHMT2-204ENST00000553324 TUSC1Q2TAM9 212 aa12.68□□□□□ -0.38
SHMT2-204ENST00000553324 CCDC58Q4VC31 144 aa12.68□□□□□ -0.38
SHMT2-204ENST00000553324 C1orf122Q6ZSJ8 110 aa12.68□□□□□ -0.38
SHMT2-204ENST00000553324 LHFPL2Q6ZUX7 228 aa12.68□□□□□ -0.38
SHMT2-204ENST00000553324 ANGPTL5Q86XS5 388 aa12.68□□□□□ -0.38
SHMT2-204ENST00000553324 MKXQ8IYA7 352 aa12.68□□□□□ -0.38
SHMT2-204ENST00000553324 Q8IYB0 196 aa12.68□□□□□ -0.38
SHMT2-204ENST00000553324 C8orf59Q8N0T1 100 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-204ENST00000553324 OR13C3Q8NGS6 347 aa12.68□□□□□ -0.38
SHMT2-204ENST00000553324 OR5AK2Q8NH90 309 aa12.68□□□□□ -0.38
SHMT2-204ENST00000553324 C8orf46Q8TAG6 207 aa12.68□□□□□ -0.38
SHMT2-204ENST00000553324 TRMT10AQ8TBZ6 339 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms