RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 PDP1Q9P0J1 537 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-218ENST00000553309 GSKIPQ9P0R6 139 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 GNG8Q9UK08 70 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 POMT2Q9UKY4 750 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 SLC7A11Q9UPY5 501 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 PPP1R3CQ9UQK1 317 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 SLC22A13Q9Y226 551 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 FAM215AQ9Y5M1 114 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 ALG6Q9Y672 507 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 PHF3Q92576 2039 aaKnown RBP4.02□□□□□ -1.77
ATXN3-218ENST00000553309 VWFP04275 2813 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 A0A1W2PQL4 384 aaPredicted RBP4.02□□□□□ -1.77
ATXN3-218ENST00000553309 FABP12A6NFH5 140 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 FAM74A7A6NL05 159 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 KRTAP9-6A8MVA2 160 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 H3BMH7 237 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 KLRC4-KLRK1H3BQV0 150 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 H7C417 338 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 CDIPTO14735 213 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 PDCD5O14737 125 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 HPGDSO60760 199 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 GLRA3O75311 464 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 GABARAPO95166 117 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 AP2A1O95782 977 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 IGHV2-5P01817 119 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 CRYBA1P05813 215 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 C8GP07360 202 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 HTR1AP08908 422 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 IGHV4-31P0DP07 118 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 GABRA1P14867 456 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 TBXA2RP21731 343 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 DRD5P21918 477 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 UCP1P25874 307 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 PTPN3P26045 913 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 SDC4P31431 198 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 CD80P33681 288 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 OR1D4P47884 311 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 RAB28P51157 221 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 CCR8P51685 355 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 PLA2G16P53816 162 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 ATP5J2P56134 94 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 TAS2R39P59534 338 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 LMO4P61968 165 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 OGDHQ02218 1023 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 OC90Q02509 493 aaPredicted RBP4.02□□□□□ -1.77
ATXN3-218ENST00000553309 CHRNB3Q05901 458 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 EXOSC2Q13868 293 aaKnown RBP4.02□□□□□ -1.77
ATXN3-218ENST00000553309 GAMTQ14353 236 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 TAF1AQ15573 450 aaPredicted RBP4.02□□□□□ -1.77
ATXN3-218ENST00000553309 ZIC1Q15915 447 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 ATP6V1FQ16864 119 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 CLEC12BQ2HXU8 276 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 FAM74A3Q4VXF1 159 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 C9orf135Q5VTT2 229 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 RTL6Q6ICC9 239 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 DPY19L2P2Q6ZN68 376 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 SPATA19Q7Z5L4 167 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 RTN4RL2Q86UN3 420 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 VRK2Q86Y07 508 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 PGAM4Q8N0Y7 254 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 MTURNQ8N3F0 131 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 STXBP6Q8NFX7 210 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 OR7A2PQ8NGA2 310 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 OR4E2Q8NGC2 313 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 OR5AP2Q8NGF4 316 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 OR5K1Q8NHB7 308 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 TERB2Q8NHR7 220 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 DYNC2LI1Q8TCX1 351 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 CCDC107Q8WV48 283 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 C1orf54Q8WWF1 131 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 ZNRF4Q8WWF5 429 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 OSTF1Q92882 214 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 ADIPOR1Q96A54 375 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 SPSB1Q96BD6 273 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 CELF6Q96J87 481 aaKnown RBP4.02□□□□□ -1.77
ATXN3-218ENST00000553309 TMEM56Q96MV1 263 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 SLC38A2Q96QD8 506 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 STACQ99469 402 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 VAT1Q99536 393 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 PHB2Q99623 299 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 RBBP8Q99708 897 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 UTP23Q9BRU9 249 aaKnown RBP4.02□□□□□ -1.77
ATXN3-218ENST00000553309 SLC35A5Q9BS91 424 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 DEFB127Q9H1M4 99 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 HEXA-AS1Q9H8Q6 139 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 WDR54Q9H977 334 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 TPT1P8Q9HAU6 139 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 PDFQ9HBH1 243 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 SLC17A7Q9P2U7 560 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 ARMCX3Q9UH62 379 aaPredicted RBP4.02□□□□□ -1.77
ATXN3-218ENST00000553309 NUFIP1Q9UHK0 495 aaKnown RBP4.02□□□□□ -1.77
ATXN3-218ENST00000553309 PRPF19Q9UMS4 504 aaKnown RBP4.02□□□□□ -1.77
ATXN3-218ENST00000553309 POMPQ9Y244 141 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 TBL2Q9Y4P3 447 aaKnown RBP4.02□□□□□ -1.77
ATXN3-218ENST00000553309 TMEM56-RWDD3S4R434 201 aa4.02□□□□□ -1.77
ATXN3-218ENST00000553309 LOC102723996A0A087X1L8 192 aa4.01□□□□□ -1.77
ATXN3-218ENST00000553309 A8MWP6 167 aa4.01□□□□□ -1.77
ATXN3-218ENST00000553309 NPIPB9F8W1W9 429 aa4.01□□□□□ -1.77
ATXN3-218ENST00000553309 F8WDY8 70 aa4.01□□□□□ -1.77
ATXN3-218ENST00000553309 IMPA2O14732 288 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms