RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 IGKV1D-17A0A075B6S4 117 aa8.92□□□□□ -0.98
VTI1BP3-201ENST00000550220 MEIOCA2RUB1 952 aa8.92□□□□□ -0.98
VTI1BP3-201ENST00000550220 RNASEK-C17orf49H0YIS7 233 aa8.92□□□□□ -0.98
VTI1BP3-201ENST00000550220 J3QT63 122 aa8.92□□□□□ -0.98
VTI1BP3-201ENST00000550220 SULT1C4O75897 302 aa8.92□□□□□ -0.98
VTI1BP3-201ENST00000550220 CLPXO76031 633 aa8.92□□□□□ -0.98
VTI1BP3-201ENST00000550220 SERPINA3P01011 423 aa8.92□□□□□ -0.98
VTI1BP3-201ENST00000550220 TTRP02766 147 aa8.92□□□□□ -0.98
VTI1BP3-201ENST00000550220 OR2T7P0C7T2 308 aa8.92□□□□□ -0.98
VTI1BP3-201ENST00000550220 FAHP16930 419 aa8.92□□□□□ -0.98
VTI1BP3-201ENST00000550220 HAAOP46952 286 aa8.92□□□□□ -0.98
VTI1BP3-201ENST00000550220 CAPZA1P52907 286 aa8.92□□□□□ -0.98
VTI1BP3-201ENST00000550220 ELF3P78545 371 aaPredicted RBP8.92□□□□□ -0.98
VTI1BP3-201ENST00000550220 RELBQ01201 579 aa8.92□□□□□ -0.98
VTI1BP3-201ENST00000550220 AANATQ16613 207 aa8.92□□□□□ -0.98
VTI1BP3-201ENST00000550220 C1orf146Q5VVC0 180 aa8.92□□□□□ -0.98
VTI1BP3-201ENST00000550220 C12orf73Q69YU5 71 aa8.92□□□□□ -0.98
VTI1BP3-201ENST00000550220 DHRS7BQ6IAN0 325 aaPredicted RBP8.92□□□□□ -0.98
VTI1BP3-201ENST00000550220 BRICD5Q6PL45 260 aa8.92□□□□□ -0.98
VTI1BP3-201ENST00000550220 ACP7Q6ZNF0 438 aa8.92□□□□□ -0.98
VTI1BP3-201ENST00000550220 FGFRL1Q8N441 504 aa8.92□□□□□ -0.98
VTI1BP3-201ENST00000550220 ZNRF1Q8ND25 227 aa8.92□□□□□ -0.98
VTI1BP3-201ENST00000550220 OR2T27Q8NH04 317 aa8.92□□□□□ -0.98
VTI1BP3-201ENST00000550220 TNFRSF14Q92956 283 aa8.92□□□□□ -0.98
VTI1BP3-201ENST00000550220 RFKQ969G6 155 aa8.92□□□□□ -0.98
VTI1BP3-201ENST00000550220 C10orf35Q96D05 121 aa8.92□□□□□ -0.98
VTI1BP3-201ENST00000550220 CITED1Q99966 193 aa8.92□□□□□ -0.98
VTI1BP3-201ENST00000550220 ADI1Q9BV57 179 aa8.92□□□□□ -0.98
VTI1BP3-201ENST00000550220 RAB18Q9NP72 206 aa8.92□□□□□ -0.98
VTI1BP3-201ENST00000550220 ZNF222Q9UK12 451 aa8.92□□□□□ -0.98
VTI1BP3-201ENST00000550220 OR52A1Q9UKL2 312 aa8.92□□□□□ -0.98
VTI1BP3-201ENST00000550220 SLC7A11Q9UPY5 501 aa8.92□□□□□ -0.98
VTI1BP3-201ENST00000550220 MAB21L2Q9Y586 359 aa8.92□□□□□ -0.98
VTI1BP3-201ENST00000550220 V9GYS6 101 aa8.92□□□□□ -0.98
VTI1BP3-201ENST00000550220 RFPL4AA6NLU0 287 aa8.91□□□□□ -0.98
VTI1BP3-201ENST00000550220 RFPL4AL1F8VTS6 287 aa8.91□□□□□ -0.98
VTI1BP3-201ENST00000550220 SRSF10O75494 262 aaKnown RBP8.91□□□□□ -0.98
VTI1BP3-201ENST00000550220 GATBO75879 557 aaKnown RBP8.91□□□□□ -0.98
VTI1BP3-201ENST00000550220 TSPAN9O75954 239 aa8.91□□□□□ -0.98
VTI1BP3-201ENST00000550220 NXPH2O95156 264 aa8.91□□□□□ -0.98
VTI1BP3-201ENST00000550220 PGA5P0DJD9 388 aa8.91□□□□□ -0.98
VTI1BP3-201ENST00000550220 SELLP14151 372 aa8.91□□□□□ -0.98
VTI1BP3-201ENST00000550220 CCL1P22362 96 aa8.91□□□□□ -0.98
VTI1BP3-201ENST00000550220 HTR1FP30939 366 aa8.91□□□□□ -0.98
VTI1BP3-201ENST00000550220 PRDX2P32119 198 aa8.91□□□□□ -0.98
VTI1BP3-201ENST00000550220 ATP6V1E1P36543 226 aa8.91□□□□□ -0.98
VTI1BP3-201ENST00000550220 RPL31P62899 125 aaKnown RBP8.91□□□□□ -0.98
VTI1BP3-201ENST00000550220 C11orf88Q6PI97 169 aa8.91□□□□□ -0.98
VTI1BP3-201ENST00000550220 Q6ZSR3 168 aa8.91□□□□□ -0.98
VTI1BP3-201ENST00000550220 CALHM1Q8IU99 346 aa8.91□□□□□ -0.98
VTI1BP3-201ENST00000550220 FAM185AQ8N0U4 392 aa8.91□□□□□ -0.98
VTI1BP3-201ENST00000550220 YIPF7Q8N8F6 280 aa8.91□□□□□ -0.98
VTI1BP3-201ENST00000550220 BEND2Q8NDZ0 799 aa8.91□□□□□ -0.98
VTI1BP3-201ENST00000550220 OR8J1Q8NGP2 316 aa8.91□□□□□ -0.98
VTI1BP3-201ENST00000550220 OR14K1Q8NGZ2 314 aa8.91□□□□□ -0.98
VTI1BP3-201ENST00000550220 LINC01006Q8NI28 216 aa8.91□□□□□ -0.98
VTI1BP3-201ENST00000550220 TRUB1Q8WWH5 349 aaKnown RBP8.91□□□□□ -0.98
VTI1BP3-201ENST00000550220 CENPNQ96H22 339 aaPredicted RBP8.91□□□□□ -0.98
VTI1BP3-201ENST00000550220 IL4I1Q96RQ9 567 aa8.91□□□□□ -0.98
VTI1BP3-201ENST00000550220 MYCBPQ99417 103 aaPredicted RBP8.91□□□□□ -0.98
VTI1BP3-201ENST00000550220 APOL4Q9BPW4 351 aa8.91□□□□□ -0.98
VTI1BP3-201ENST00000550220 NRIP2Q9BQI9 281 aa8.91□□□□□ -0.98
VTI1BP3-201ENST00000550220 PKIBQ9C010 78 aa8.91□□□□□ -0.98
VTI1BP3-201ENST00000550220 PLEKHA1Q9HB21 404 aa8.91□□□□□ -0.98
VTI1BP3-201ENST00000550220 SLC22A13Q9Y226 551 aa8.91□□□□□ -0.98
VTI1BP3-201ENST00000550220 BOLA1Q9Y3E2 137 aa8.91□□□□□ -0.98
VTI1BP3-201ENST00000550220 PQLC2LA1A4F0 135 aa8.9□□□□□ -0.98
VTI1BP3-201ENST00000550220 ANKRD61A6NGH8 418 aa8.9□□□□□ -0.98
VTI1BP3-201ENST00000550220 METTL15A6NJ78 407 aa8.9□□□□□ -0.98
VTI1BP3-201ENST00000550220 PRR32B1ATL7 298 aa8.9□□□□□ -0.98
VTI1BP3-201ENST00000550220 SYT7O43581 403 aa8.9□□□□□ -0.98
VTI1BP3-201ENST00000550220 MITFO75030 526 aaPredicted RBP8.9□□□□□ -0.98
VTI1BP3-201ENST00000550220 CIB2O75838 187 aa8.9□□□□□ -0.98
VTI1BP3-201ENST00000550220 MPZP25189 248 aa8.9□□□□□ -0.98
VTI1BP3-201ENST00000550220 SAA4P35542 130 aa8.9□□□□□ -0.98
VTI1BP3-201ENST00000550220 MFGE8Q08431 387 aaPredicted RBP8.9□□□□□ -0.98
VTI1BP3-201ENST00000550220 IL24Q13007 206 aa8.9□□□□□ -0.98
VTI1BP3-201ENST00000550220 TAF9Q16594 264 aa8.9□□□□□ -0.98
VTI1BP3-201ENST00000550220 PLEKHG7Q6ZR37 379 aa8.9□□□□□ -0.98
VTI1BP3-201ENST00000550220 ASRGL1Q7L266 308 aa8.9□□□□□ -0.98
VTI1BP3-201ENST00000550220 KCTD20Q7Z5Y7 419 aa8.9□□□□□ -0.98
VTI1BP3-201ENST00000550220 C10orf67Q8IYJ2 551 aa8.9□□□□□ -0.98
VTI1BP3-201ENST00000550220 OR51G2Q8NGK0 314 aa8.9□□□□□ -0.98
VTI1BP3-201ENST00000550220 TAF15Q92804 592 aaKnown RBP eCLIP8.9□□□□□ -0.98
VTI1BP3-201ENST00000550220 RBM4BQ9BQ04 359 aaKnown RBP8.9□□□□□ -0.98
VTI1BP3-201ENST00000550220 MEGF9Q9H1U4 602 aa8.9□□□□□ -0.98
VTI1BP3-201ENST00000550220 MMP27Q9H306 513 aa8.9□□□□□ -0.98
VTI1BP3-201ENST00000550220 USE1Q9NZ43 259 aa8.9□□□□□ -0.98
VTI1BP3-201ENST00000550220 MRM2Q9UI43 246 aaKnown RBP8.9□□□□□ -0.98
VTI1BP3-201ENST00000550220 A0A1B0GTI1 187 aa8.89□□□□□ -0.99
VTI1BP3-201ENST00000550220 SNTNA6NMZ2 147 aa8.89□□□□□ -0.99
VTI1BP3-201ENST00000550220 RPP14O95059 124 aaKnown RBP8.89□□□□□ -0.99
VTI1BP3-201ENST00000550220 CHRM2P08172 466 aa8.89□□□□□ -0.99
VTI1BP3-201ENST00000550220 FUT6P51993 359 aa8.89□□□□□ -0.99
VTI1BP3-201ENST00000550220 LGALS4P56470 323 aa8.89□□□□□ -0.99
VTI1BP3-201ENST00000550220 PROK1P58294 105 aa8.89□□□□□ -0.99
VTI1BP3-201ENST00000550220 ERVFRD-1P60508 538 aa8.89□□□□□ -0.99
VTI1BP3-201ENST00000550220 CDC42P60953 191 aa8.89□□□□□ -0.99
VTI1BP3-201ENST00000550220 TMEM200BQ69YZ2 307 aa8.89□□□□□ -0.99
VTI1BP3-201ENST00000550220 LIAT1Q6ZQX7 453 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms