RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 TPTEP56180 551 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 HGFACQ04756 655 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 RUNX1T1Q06455 604 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 ZNF816Q0VGE8 651 aaPredicted RBP4.13□□□□□ -1.75
SCAF11-212ENST00000549162 MEF2DQ14814 521 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 ARMCX4Q5H9R4 360 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 ZNF626Q68DY1 528 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 ZNF474Q6S9Z5 364 aaPredicted RBP4.13□□□□□ -1.75
SCAF11-212ENST00000549162 Q6ZS46 218 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 BHLHA15Q7RTS1 189 aaPredicted RBP4.13□□□□□ -1.75
SCAF11-212ENST00000549162 C16orf82Q7Z2V1 217 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 BEND2Q8NDZ0 799 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 ATP6V1C2Q8NEY4 427 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 OR1M1Q8NGA1 313 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 OR8B12Q8NGG6 310 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 OR6N1Q8NGY5 312 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 LYPD6BQ8NI32 183 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 TMEM171Q8WVE6 324 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 ERMAPQ96PL5 475 aaPredicted RBP4.13□□□□□ -1.75
SCAF11-212ENST00000549162 MACROD1Q9BQ69 325 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 IFT27Q9BW83 186 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 SESN1Q9Y6P5 492 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 YLPM1P49750 1951 aaKnown RBP4.12□□□□□ -1.75
SCAF11-212ENST00000549162 CLDN34H7C241 214 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 MAGEB4O15481 346 aaPredicted RBP4.12□□□□□ -1.75
SCAF11-212ENST00000549162 ZFPL1O95159 310 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 CH25HO95992 272 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 SFXN4Q6P4A7 337 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 OR4N5Q8IXE1 308 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 TCEANCQ8N8B7 351 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 CNIH3Q8TBE1 160 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 ELMOD3Q96FG2 381 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 TMEM56Q96MV1 263 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 TXN2Q99757 166 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 SLC25A21Q9BQT8 299 aaPredicted RBP4.12□□□□□ -1.75
SCAF11-212ENST00000549162 MED11Q9P086 117 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 SSR3Q9UNL2 185 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 TMEM56-RWDD3S4R434 201 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 A0A0G2JNJ9 132 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 ZNF737O75373 536 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 OR6A2O95222 327 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 RPA2P15927 270 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 ZNF43P17038 809 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 OR1E2P47887 323 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 SLC25A24Q6NUK1 477 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 LEG1Q6P5S2 330 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 SKA3Q8IX90 412 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 Q8N6K4 173 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 APH1AQ96BI3 265 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 HMG20AQ9NP66 347 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 Q9UFV3 132 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 A0A0G2JMP0 313 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 A0A0X1KG70 313 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 KIAA1324LA8MWY0 1029 aaPredicted RBP4.12□□□□□ -1.75
SCAF11-212ENST00000549162 C15orf65H3BRN8 121 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 CASKO14936 926 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 LANCL1O43813 399 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 PITX3O75364 302 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 SPDEFO95238 335 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 KRT8P05787 483 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 SDC2P34741 201 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 KIR2DS2P43631 304 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 ACTBP60709 375 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 ACTG1P63261 375 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 GALK2Q01415 458 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 TGFBR3Q03167 851 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 CCDC6Q16204 474 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 SNAPC1Q16533 368 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 TBRG1Q3YBR2 411 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 IQCF2Q8IXL9 164 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 MKXQ8IYA7 352 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 OR11H6Q8NGC7 330 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 OR4A4PQ8NGN8 299 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 OR5AK2Q8NH90 309 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 MYOZ3Q8TDC0 251 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 HPSE2Q8WWQ2 592 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 SGCDQ92629 289 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 FYTTD1Q96QD9 318 aaKnown RBP4.12□□□□□ -1.75
SCAF11-212ENST00000549162 LPAR5Q9H1C0 372 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 UFSP2Q9NUQ7 469 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 DSCAMO60469 2012 aa4.12□□□□□ -1.75
SCAF11-212ENST00000549162 DYNC2H1Q8NCM8 4307 aaKnown RBP4.11□□□□□ -1.75
SCAF11-212ENST00000549162 LOC100509620A0A075B734 347 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 CLDN25C9JDP6 229 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 TSC22D2O75157 780 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 GKN3PP0CG01 181 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 ZNF134P52741 427 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 ZNF273Q14593 569 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 KRTAP1-3Q8IUG1 177 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 FAM219AQ8IW50 185 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 LRRC18Q8N456 261 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 LSM10Q969L4 123 aaKnown RBP4.11□□□□□ -1.75
SCAF11-212ENST00000549162 YIPF5Q969M3 257 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 PIK3IP1Q96FE7 263 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 TPD52L3Q96J77 140 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 PIMREGQ9BSJ6 248 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 SLC35D1Q9NTN3 355 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 EXTL2Q9UBQ6 330 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 ANKRD30BLA7E2S9 258 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 YPEL1O60688 119 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms