RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 OR9K2Q8NGE7 335 aa12.36□□□□□ -0.43
RAPGEF3-218ENST00000548919 HIST1H2BAQ96A08 127 aa12.36□□□□□ -0.43
RAPGEF3-218ENST00000548919 OR6C1Q96RD1 312 aa12.36□□□□□ -0.43
RAPGEF3-218ENST00000548919 GPR173Q9NS66 373 aa12.36□□□□□ -0.43
RAPGEF3-218ENST00000548919 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 FAM221AA4D161 298 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 CRYM-AS1A6NIL9 109 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 SPRY1O43609 319 aaPredicted RBP12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 APOC1P02654 83 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 LBX1P52954 281 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 PIGPP57054 158 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 SURF2Q15527 256 aaPredicted RBP12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 KCNMB1Q16558 191 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 TAF9Q16594 264 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 RPUSD3Q6P087 351 aaKnown RBP12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 NANPQ8TBE9 248 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 RNF138Q8WVD3 245 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 REEP6Q96HR9 211 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 PIGQQ9BRB3 760 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 WFDC1Q9HC57 220 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 TUBD1Q9UJT1 453 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 EDARQ9UNE0 448 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 CELSR3Q9NYQ7 3312 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 A0A1W2PPE3 182 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 AQP7P3A6NL99 342 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 PRSS44E7EML9 344 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 TSPAN15O95858 294 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 IFNA21P01568 189 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 MBPP02686 304 aaPredicted RBP12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 OR5H8P0DN80 308 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 ZNF44P15621 663 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 MSX1P28360 303 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 ALDH3B1P43353 468 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 FXYD4P59646 89 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 RAB5BP61020 215 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 SNAI3Q3KNW1 292 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 ZNF574Q6ZN55 896 aaPredicted RBP12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 OR2AE1Q8NHA4 323 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 HAS2Q92819 552 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 ZNF385AQ96PM9 386 aaKnown RBP12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 TM2D1Q9BX74 207 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 NXT1Q9UKK6 140 aaKnown RBP12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 CA14Q9ULX7 337 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 IGLV3-1P01715 115 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 PNLIPP16233 465 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 MSR1P21757 451 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 PTAFRP25105 342 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 ENDOGQ14249 297 aaKnown RBP12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 AWAT1Q58HT5 328 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 SLC16A14Q7RTX9 510 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 ADPRHL1Q8NDY3 354 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 LILRB1Q8NHL6 650 aaPredicted RBP12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 ZNF837Q96EG3 531 aaPredicted RBP12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 RBM24Q9BX46 236 aaKnown RBP12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 CHST5Q9GZS9 411 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 SH3BGRL3Q9H299 93 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 AKIRIN1Q9H9L7 192 aaPredicted RBP12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 RNF122Q9H9V4 155 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 GHRLQ9UBU3 117 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 ANXA10Q9UJ72 324 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 TIMM10BQ9Y5J6 103 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 V9GYS6 101 aa12.35□□□□□ -0.43
RAPGEF3-218ENST00000548919 SHANK1Q9Y566 2161 aa12.34□□□□□ -0.43
RAPGEF3-218ENST00000548919 A6NLC8 198 aa12.34□□□□□ -0.43
RAPGEF3-218ENST00000548919 MASP2O00187 686 aa12.34□□□□□ -0.43
RAPGEF3-218ENST00000548919 IFNA4P05014 189 aa12.34□□□□□ -0.43
RAPGEF3-218ENST00000548919 CTSDP07339 412 aaPredicted RBP12.34□□□□□ -0.43
RAPGEF3-218ENST00000548919 OR5AC1P0C628 307 aa12.34□□□□□ -0.43
RAPGEF3-218ENST00000548919 GUCA1AP43080 201 aaPredicted RBP12.34□□□□□ -0.43
RAPGEF3-218ENST00000548919 ASCL1P50553 236 aa12.34□□□□□ -0.43
RAPGEF3-218ENST00000548919 PHLDA2Q53GA4 152 aa12.34□□□□□ -0.43
RAPGEF3-218ENST00000548919 LYZL2Q7Z4W2 148 aa12.34□□□□□ -0.43
RAPGEF3-218ENST00000548919 CARFQ8N187 725 aa12.34□□□□□ -0.43
RAPGEF3-218ENST00000548919 UCN2Q96RP3 112 aa12.34□□□□□ -0.43
RAPGEF3-218ENST00000548919 SEMA5BQ9P283 1151 aa12.34□□□□□ -0.43
RAPGEF3-218ENST00000548919 AK3Q9UIJ7 227 aa12.34□□□□□ -0.43
RAPGEF3-218ENST00000548919 IGLV3-12A0A075B6K2 115 aa12.34□□□□□ -0.43
RAPGEF3-218ENST00000548919 FAM230AA0A1W2PPH8 454 aa12.34□□□□□ -0.43
RAPGEF3-218ENST00000548919 ZNF850A8MQ14 1090 aa12.34□□□□□ -0.43
RAPGEF3-218ENST00000548919 M0R036 132 aa12.34□□□□□ -0.43
RAPGEF3-218ENST00000548919 GAPDHP04406 335 aaKnown RBP12.34□□□□□ -0.43
RAPGEF3-218ENST00000548919 CSNK1A1P48729 337 aa12.34□□□□□ -0.43
RAPGEF3-218ENST00000548919 NOVA1P51513 510 aaKnown RBP12.34□□□□□ -0.43
RAPGEF3-218ENST00000548919 MTCP1P56278 107 aa12.34□□□□□ -0.43
RAPGEF3-218ENST00000548919 KRBOX4Q5JUW0 171 aa12.34□□□□□ -0.43
RAPGEF3-218ENST00000548919 OPN5Q6U736 354 aa12.34□□□□□ -0.43
RAPGEF3-218ENST00000548919 CPEB2Q7Z5Q1 589 aaKnown RBP12.34□□□□□ -0.43
RAPGEF3-218ENST00000548919 TMEM156Q8N614 296 aa12.34□□□□□ -0.43
RAPGEF3-218ENST00000548919 OR5L2Q8NGL0 311 aa12.34□□□□□ -0.43
RAPGEF3-218ENST00000548919 MARS2Q96GW9 593 aaKnown RBP12.34□□□□□ -0.43
RAPGEF3-218ENST00000548919 Q96M66 194 aa12.34□□□□□ -0.43
RAPGEF3-218ENST00000548919 RASL10BQ96S79 203 aa12.34□□□□□ -0.43
RAPGEF3-218ENST00000548919 EIF5A2Q9GZV4 153 aaKnown RBP12.34□□□□□ -0.43
RAPGEF3-218ENST00000548919 SPACA1Q9HBV2 294 aa12.34□□□□□ -0.43
RAPGEF3-218ENST00000548919 A0A1W2PPH5 198 aa12.33□□□□□ -0.44
RAPGEF3-218ENST00000548919 C7orf77A4D0Y5 90 aa12.33□□□□□ -0.44
RAPGEF3-218ENST00000548919 C1orf196B1AJZ1 125 aa12.33□□□□□ -0.44
RAPGEF3-218ENST00000548919 SCRG1O75711 98 aa12.33□□□□□ -0.44
RAPGEF3-218ENST00000548919 ZFAND5O76080 213 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms