RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 CACNG2Q9Y698 323 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 SPTA1P02549 2419 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 PTPRQQ9UMZ3 2332 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 ATG2BQ96BY7 2078 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 ASXL3Q9C0F0 2248 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 CABIN1Q9Y6J0 2220 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 DENND4CQ5VZ89 1909 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 PIEZO2Q9H5I5 2752 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 ATMQ13315 3056 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 IGHV1-45A0A0A0MS14 117 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 TRAV25A0A0B4J276 109 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 TRBV11-1A0A0K0K1C0 115 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 A0A1B0GVI7 797 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 SMCO3A2RU48 225 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 HACD1B0YJ81 288 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 KLRC4-KLRK1H3BQV0 150 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 H7C0C1 242 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 C19orf84I3L1E1 186 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 GOSR2O14653 212 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 LSM1O15116 133 aaKnown RBP2.64□□□□□ -1.99
PTCH1-216ENST00000548379 PFDN6O15212 129 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 SOX15O60248 233 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 CDC40O60508 579 aaKnown RBP eCLIP2.64□□□□□ -1.99
PTCH1-216ENST00000548379 OR2F2O95006 317 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 PAHP00439 452 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 ALDOBP05062 364 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 TPM3P06753 285 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 COX6A1P12074 109 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 HPGDP15428 266 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 CMPK1P30085 196 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 SLC1A1P43005 524 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 RPS5P46782 204 aaKnown RBP2.64□□□□□ -1.99
PTCH1-216ENST00000548379 GABRA4P48169 554 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 UGT2B15P54855 530 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 MRPS22P82650 360 aaKnown RBP2.64□□□□□ -1.99
PTCH1-216ENST00000548379 DMTNQ08495 405 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 IHHQ14623 411 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 GUCA2BQ16661 112 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 AGBL2Q5U5Z8 902 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 SLC25A25Q6KCM7 469 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 TMEM53Q6P2H8 277 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 THOC6Q86W42 341 aaKnown RBP2.64□□□□□ -1.99
PTCH1-216ENST00000548379 OR7G2Q8NG99 324 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 OR2L8Q8NGY9 312 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 GLYATL2Q8WU03 294 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 ASZ1Q8WWH4 475 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 STMN2Q93045 179 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 TMEM54Q969K7 222 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 RAD51AP1Q96B01 352 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 ZNF799Q96GE5 643 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 FAM210BQ96KR6 192 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 OLFM3Q96PB7 478 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 EBNA1BP2Q99848 306 aaKnown RBP2.64□□□□□ -1.99
PTCH1-216ENST00000548379 RARRES2Q99969 163 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 FAM96AQ9H5X1 160 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 ZNF331Q9NQX6 463 aaPredicted RBP2.64□□□□□ -1.99
PTCH1-216ENST00000548379 NUFIP1Q9UHK0 495 aaKnown RBP2.64□□□□□ -1.99
PTCH1-216ENST00000548379 PITPNC1Q9UKF7 332 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 NUP50Q9UKX7 468 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 TBC1D24Q9ULP9 559 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 F11RQ9Y624 299 aaKnown RBP2.64□□□□□ -1.99
PTCH1-216ENST00000548379 MGAQ8IWI9 3026 aa2.64□□□□□ -1.99
PTCH1-216ENST00000548379 ZNF638Q14966 1978 aaKnown RBP2.63□□□□□ -1.99
PTCH1-216ENST00000548379 TEX15Q9BXT5 2789 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 UNC79Q9P2D8 2635 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 IGLV3-12A0A075B6K2 115 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 A0A087X0T9 212 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 LINC00854A0A1B0GVQ3 168 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 GABRR3A8MPY1 467 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 MRPS12O15235 138 aaKnown RBP2.63□□□□□ -1.99
PTCH1-216ENST00000548379 CST8O60676 142 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 IGLV2-23P01705 113 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 GIPP09681 153 aaPredicted RBP2.63□□□□□ -1.99
PTCH1-216ENST00000548379 CSF3P09919 207 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 FAM228BP0C875 321 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 SMIM10L1P0DMW3 83 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 PSG2P11465 335 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 BMI1P35226 326 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 RPA3P35244 121 aaPredicted RBP2.63□□□□□ -1.99
PTCH1-216ENST00000548379 RPS10P46783 165 aaKnown RBP2.63□□□□□ -1.99
PTCH1-216ENST00000548379 CYB561P49447 251 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 SKP1P63208 163 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 XIAPP98170 497 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 PLGLB1Q02325 96 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 ZNF92Q03936 586 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 REG3AQ06141 175 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 AQP6Q13520 282 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 ITIH4Q14624 930 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 PSG5Q15238 335 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 TGFBIQ15582 683 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 HIKESHIQ53FT3 197 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 FBXO48Q5FWF7 155 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 PTRHD1Q6GMV3 140 aaKnown RBP2.63□□□□□ -1.99
PTCH1-216ENST00000548379 LCN12Q6JVE5 192 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 CNIH2Q6PI25 160 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 SSX9Q7RTT3 188 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 CAMK2N1Q7Z7J9 78 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 LINC00523Q86TU6 105 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 ZNF429Q86V71 674 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 DOLPP1Q86YN1 238 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms