RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 ELL3Q9HB65 397 aaPredicted RBP5.5□□□□□ -1.53
SCAF11-211ENST00000547950 KRT84Q9NSB2 600 aa5.5□□□□□ -1.53
SCAF11-211ENST00000547950 ENPP5Q9UJA9 477 aa5.5□□□□□ -1.53
SCAF11-211ENST00000547950 CAB39Q9Y376 341 aaPredicted RBP5.5□□□□□ -1.53
SCAF11-211ENST00000547950 RNF114Q9Y508 228 aa5.5□□□□□ -1.53
SCAF11-211ENST00000547950 MAB21L2Q9Y586 359 aa5.5□□□□□ -1.53
SCAF11-211ENST00000547950 WNK2Q9Y3S1 2297 aa5.5□□□□□ -1.53
SCAF11-211ENST00000547950 MEGF8Q7Z7M0 2845 aa5.5□□□□□ -1.53
SCAF11-211ENST00000547950 IGKV1D-17A0A075B6S4 117 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 BTBD17A6NE02 478 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 OR5B21A6NL26 309 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 RFPL4AA6NLU0 287 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 ZNF670-ZNF695F2Z2N8 137 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 LOC110117498-PIK3R3F6TDL0 507 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 RFPL4AL1F8VTS6 287 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 H3BSH0 61 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 SIGLEC5O15389 551 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 PAX4O43316 350 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 SYNGR1O43759 233 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 MTRF1O75570 445 aaKnown RBP5.49□□□□□ -1.53
SCAF11-211ENST00000547950 RPP14O95059 124 aaKnown RBP5.49□□□□□ -1.53
SCAF11-211ENST00000547950 TTRP02766 147 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 FBP1P09467 338 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 ATP6V1B1P15313 513 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 PRDX2P32119 198 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 POLR2IP36954 125 aaKnown RBP5.49□□□□□ -1.53
SCAF11-211ENST00000547950 HAAOP46952 286 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 CAV3P56539 151 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 CXCR4P61073 352 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 ACTR3P61158 418 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 DEFA6Q01524 100 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 TAF9Q16594 264 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 ODF4Q2M2E3 257 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 ZNF684Q5T5D7 378 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 BCL2L15Q5TBC7 163 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 AADACL4Q5VUY2 407 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 METAP1DQ6UB28 335 aaPredicted RBP5.49□□□□□ -1.53
SCAF11-211ENST00000547950 GDPGP1Q6ZNW5 385 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 C1orf122Q6ZSJ8 110 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 ASRGL1Q7L266 308 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 LDLRAD3Q86YD5 345 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 ZDHHC13Q8IUH4 622 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 OR4M1Q8NGD0 313 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 LINC01006Q8NI28 216 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 C8orf46Q8TAG6 207 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 DMRTB1Q96MA1 342 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 TBX5Q99593 518 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 PRRG3Q9BZD7 231 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 METTL8Q9H825 291 aaKnown RBP5.49□□□□□ -1.53
SCAF11-211ENST00000547950 GPR173Q9NS66 373 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 RASL12Q9NYN1 266 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 NUFIP1Q9UHK0 495 aaKnown RBP5.49□□□□□ -1.53
SCAF11-211ENST00000547950 OR52A1Q9UKL2 312 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 SLC22A13Q9Y226 551 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 SF3B6Q9Y3B4 125 aaKnown RBP5.49□□□□□ -1.53
SCAF11-211ENST00000547950 AP4S1Q9Y587 144 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 MGAM2Q2M2H8 2515 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 TANC2Q9HCD6 1990 aa5.49□□□□□ -1.53
SCAF11-211ENST00000547950 FAM230AA0A1W2PPH8 454 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 ANKRD61A6NGH8 418 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 A6NHS1 94 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 SLC22A31A6NKX4 558 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 ZAR1LA6NP61 321 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 M0R1W7 72 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 SLC1A7O00341 560 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 ANGPTL7O43827 346 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 DHRS3O75911 302 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 INMTO95050 263 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 NXPH2O95156 264 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 APOL3O95236 402 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 IGLV3-1P01715 115 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 FASP25445 335 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 SAA4P35542 130 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 ATP6V1E1P36543 226 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 CEBPDP49716 269 aaPredicted RBP5.48□□□□□ -1.53
SCAF11-211ENST00000547950 UBE2E1P51965 193 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 GP2P55259 537 aaKnown RBP5.48□□□□□ -1.53
SCAF11-211ENST00000547950 KRTAP10-3P60369 221 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 ERVFRD-1P60508 538 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 EFNB1P98172 346 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 ACSM1Q08AH1 577 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 BNIP1Q12981 228 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 ATP6AP1Q15904 470 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 CLVS2Q5SYC1 327 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 ZBTB37Q5TC79 503 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 C1orf146Q5VVC0 180 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 SLX4IPQ5VYV7 408 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 NXNL2Q5VZ03 156 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 NCR3LG1Q68D85 454 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 C12orf73Q69YU5 71 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 TMEM200BQ69YZ2 307 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 DHRS7BQ6IAN0 325 aaPredicted RBP5.48□□□□□ -1.53
SCAF11-211ENST00000547950 ACP7Q6ZNF0 438 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 Q6ZSV7 163 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 KRT74Q7RTS7 529 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 ANGPTL5Q86XS5 388 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 ZNF573Q86YE8 665 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 ELMOD2Q8IZ81 293 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 CD177Q8N6Q3 437 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 YIPF7Q8N8F6 280 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms