RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 TMEM106AQ96A25 262 aa14.05□□□□□ -0.16
CCDC38-203ENST00000546803 TMEM186Q96B77 213 aa14.05□□□□□ -0.16
CCDC38-203ENST00000546803 OPALINQ96PE5 141 aa14.05□□□□□ -0.16
CCDC38-203ENST00000546803 ISYNA1Q9NPH2 558 aa14.05□□□□□ -0.16
CCDC38-203ENST00000546803 TMEM160Q9NX00 188 aa14.05□□□□□ -0.16
CCDC38-203ENST00000546803 DNAJB11Q9UBS4 358 aa14.05□□□□□ -0.16
CCDC38-203ENST00000546803 CHD3Q12873 2000 aaKnown RBP14.05□□□□□ -0.16
CCDC38-203ENST00000546803 FLNAP21333 2647 aaKnown RBP14.05□□□□□ -0.16
CCDC38-203ENST00000546803 DYSFO75923 2080 aa14.04□□□□□ -0.16
CCDC38-203ENST00000546803 IGKV1-27A0A075B6S5 117 aa14.04□□□□□ -0.16
CCDC38-203ENST00000546803 IGHV3OR15-7A0A075B7D8 119 aa14.04□□□□□ -0.16
CCDC38-203ENST00000546803 PNMA8CA0A1B0GUJ8 204 aa14.04□□□□□ -0.16
CCDC38-203ENST00000546803 A8MXK9 166 aa14.04□□□□□ -0.16
CCDC38-203ENST00000546803 SULT1B1O43704 296 aa14.04□□□□□ -0.16
CCDC38-203ENST00000546803 SYNGR1O43759 233 aa14.04□□□□□ -0.16
CCDC38-203ENST00000546803 PGA5P0DJD9 388 aa14.04□□□□□ -0.16
CCDC38-203ENST00000546803 RPS11P62280 158 aaKnown RBP eCLIP14.04□□□□□ -0.16
CCDC38-203ENST00000546803 TBCEQ15813 527 aaPredicted RBP14.04□□□□□ -0.16
CCDC38-203ENST00000546803 Q499Y3 187 aa14.04□□□□□ -0.16
CCDC38-203ENST00000546803 ZNF529Q6P280 563 aa14.04□□□□□ -0.16
CCDC38-203ENST00000546803 CALHM1Q8IU99 346 aa14.04□□□□□ -0.16
CCDC38-203ENST00000546803 MS4A15Q8N5U1 240 aa14.04□□□□□ -0.16
CCDC38-203ENST00000546803 TMIGD2Q96BF3 282 aa14.04□□□□□ -0.16
CCDC38-203ENST00000546803 CPNE2Q96FN4 548 aaPredicted RBP14.04□□□□□ -0.16
CCDC38-203ENST00000546803 DNTTIP1Q9H147 329 aa14.04□□□□□ -0.16
CCDC38-203ENST00000546803 LPAR2Q9HBW0 351 aa14.04□□□□□ -0.16
CCDC38-203ENST00000546803 KAAG1Q9UBP8 84 aa14.04□□□□□ -0.16
CCDC38-203ENST00000546803 POLR3KQ9Y2Y1 108 aaPredicted RBP14.04□□□□□ -0.16
CCDC38-203ENST00000546803 ACANP16112 2415 aa14.04□□□□□ -0.16
CCDC38-203ENST00000546803 TANC2Q9HCD6 1990 aa14.03□□□□□ -0.16
CCDC38-203ENST00000546803 MED13LQ71F56 2210 aa14.03□□□□□ -0.16
CCDC38-203ENST00000546803 PPIAL4CA0A0B4J2A2 164 aa14.03□□□□□ -0.16
CCDC38-203ENST00000546803 ADAM20O43506 726 aa14.03□□□□□ -0.16
CCDC38-203ENST00000546803 CYB5AP00167 134 aa14.03□□□□□ -0.16
CCDC38-203ENST00000546803 GYPAP02724 150 aa14.03□□□□□ -0.16
CCDC38-203ENST00000546803 RAB3AP20336 220 aa14.03□□□□□ -0.16
CCDC38-203ENST00000546803 PITPNBP48739 271 aa14.03□□□□□ -0.16
CCDC38-203ENST00000546803 NPY4RP50391 375 aa14.03□□□□□ -0.16
CCDC38-203ENST00000546803 DOC2BQ14184 412 aa14.03□□□□□ -0.16
CCDC38-203ENST00000546803 ATPAF1Q5TC12 328 aaPredicted RBP14.03□□□□□ -0.16
CCDC38-203ENST00000546803 LYPD2Q6UXB3 125 aa14.03□□□□□ -0.16
CCDC38-203ENST00000546803 SLC36A1Q7Z2H8 476 aa14.03□□□□□ -0.16
CCDC38-203ENST00000546803 UFD1Q92890 307 aa14.03□□□□□ -0.16
CCDC38-203ENST00000546803 NRIP2Q9BQI9 281 aa14.03□□□□□ -0.16
CCDC38-203ENST00000546803 SSBP3Q9BWW4 388 aaPredicted RBP14.03□□□□□ -0.16
CCDC38-203ENST00000546803 WDR13Q9H1Z4 485 aa14.03□□□□□ -0.16
CCDC38-203ENST00000546803 HIF1ANQ9NWT6 349 aa14.03□□□□□ -0.16
CCDC38-203ENST00000546803 NLKQ9UBE8 527 aa14.03□□□□□ -0.16
CCDC38-203ENST00000546803 MAGEB3O15480 346 aa14.02□□□□□ -0.17
CCDC38-203ENST00000546803 HCKP08631 526 aa14.02□□□□□ -0.17
CCDC38-203ENST00000546803 GATA3P23771 443 aa14.02□□□□□ -0.17
CCDC38-203ENST00000546803 MAP2K4P45985 399 aa14.02□□□□□ -0.17
CCDC38-203ENST00000546803 GMFBP60983 142 aa14.02□□□□□ -0.17
CCDC38-203ENST00000546803 SEC61A1P61619 476 aaKnown RBP14.02□□□□□ -0.17
CCDC38-203ENST00000546803 GNB2P62879 340 aa14.02□□□□□ -0.17
CCDC38-203ENST00000546803 PPP3R1P63098 170 aa14.02□□□□□ -0.17
CCDC38-203ENST00000546803 MLLT11Q13015 90 aaPredicted RBP14.02□□□□□ -0.17
CCDC38-203ENST00000546803 TPBGQ13641 420 aa14.02□□□□□ -0.17
CCDC38-203ENST00000546803 SMIM21Q3B7S5 101 aa14.02□□□□□ -0.17
CCDC38-203ENST00000546803 STUMQ69YW2 141 aa14.02□□□□□ -0.17
CCDC38-203ENST00000546803 MKXQ8IYA7 352 aa14.02□□□□□ -0.17
CCDC38-203ENST00000546803 SVOPQ8N4V2 548 aa14.02□□□□□ -0.17
CCDC38-203ENST00000546803 OR13C5Q8NGS8 318 aa14.02□□□□□ -0.17
CCDC38-203ENST00000546803 SEH1LQ96EE3 360 aa14.02□□□□□ -0.17
CCDC38-203ENST00000546803 TAS2R4Q9NYW5 299 aa14.02□□□□□ -0.17
CCDC38-203ENST00000546803 CKLFQ9UBR5 152 aa14.02□□□□□ -0.17
CCDC38-203ENST00000546803 CLN8Q9UBY8 286 aa14.02□□□□□ -0.17
CCDC38-203ENST00000546803 LRRC42Q9Y546 428 aa14.02□□□□□ -0.17
CCDC38-203ENST00000546803 CR1P17927 2039 aa14.02□□□□□ -0.17
CCDC38-203ENST00000546803 TRBV5-7A0A0A0MS05 114 aa14.01□□□□□ -0.17
CCDC38-203ENST00000546803 OR2AT4A6NND4 320 aa14.01□□□□□ -0.17
CCDC38-203ENST00000546803 KIAA1324LA8MWY0 1029 aaPredicted RBP14.01□□□□□ -0.17
CCDC38-203ENST00000546803 ZNF879B4DU55 563 aa14.01□□□□□ -0.17
CCDC38-203ENST00000546803 TMPRSS2O15393 492 aa14.01□□□□□ -0.17
CCDC38-203ENST00000546803 GPX5O75715 221 aa14.01□□□□□ -0.17
CCDC38-203ENST00000546803 NXPH2O95156 264 aa14.01□□□□□ -0.17
CCDC38-203ENST00000546803 ALDOBP05062 364 aa14.01□□□□□ -0.17
CCDC38-203ENST00000546803 HSMCR30P0CW71 290 aa14.01□□□□□ -0.17
CCDC38-203ENST00000546803 ZFP36P26651 326 aaKnown RBP14.01□□□□□ -0.17
CCDC38-203ENST00000546803 MAPK3P27361 379 aaPredicted RBP14.01□□□□□ -0.17
CCDC38-203ENST00000546803 ERVK11-1P61568 191 aa14.01□□□□□ -0.17
CCDC38-203ENST00000546803 LCN2P80188 198 aa14.01□□□□□ -0.17
CCDC38-203ENST00000546803 PDZK1IP1Q13113 114 aa14.01□□□□□ -0.17
CCDC38-203ENST00000546803 C11orf91Q3C1V1 193 aa14.01□□□□□ -0.17
CCDC38-203ENST00000546803 WDR25Q64LD2 544 aaPredicted RBP14.01□□□□□ -0.17
CCDC38-203ENST00000546803 ZNF841Q6ZN19 808 aa14.01□□□□□ -0.17
CCDC38-203ENST00000546803 ACP7Q6ZNF0 438 aa14.01□□□□□ -0.17
CCDC38-203ENST00000546803 SLC25A26Q70HW3 274 aa14.01□□□□□ -0.17
CCDC38-203ENST00000546803 ZNF367Q7RTV3 350 aa14.01□□□□□ -0.17
CCDC38-203ENST00000546803 Q8IYB0 196 aa14.01□□□□□ -0.17
CCDC38-203ENST00000546803 ANGPTL6Q8NI99 470 aa14.01□□□□□ -0.17
CCDC38-203ENST00000546803 CEP19Q96LK0 163 aa14.01□□□□□ -0.17
CCDC38-203ENST00000546803 MGLLQ99685 303 aa14.01□□□□□ -0.17
CCDC38-203ENST00000546803 HES4Q9HCC6 221 aa14.01□□□□□ -0.17
CCDC38-203ENST00000546803 TMEM138Q9NPI0 162 aa14.01□□□□□ -0.17
CCDC38-203ENST00000546803 ACOT13Q9NPJ3 140 aa14.01□□□□□ -0.17
CCDC38-203ENST00000546803 SNTG1Q9NSN8 517 aa14.01□□□□□ -0.17
CCDC38-203ENST00000546803 OR5V1Q9UGF6 321 aa14.01□□□□□ -0.17
CCDC38-203ENST00000546803 CELSR1Q9NYQ6 3014 aa14.01□□□□□ -0.17
CCDC38-203ENST00000546803 CSPG4Q6UVK1 2322 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms