RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 VAMP1P23763 118 aa10.3□□□□□ -0.76
CCDC38-202ENST00000546386 APLNRP35414 380 aa10.3□□□□□ -0.76
CCDC38-202ENST00000546386 AP3S2P59780 193 aa10.3□□□□□ -0.76
CCDC38-202ENST00000546386 PRDX4Q13162 271 aa10.3□□□□□ -0.76
CCDC38-202ENST00000546386 MICBQ29980 383 aa10.3□□□□□ -0.76
CCDC38-202ENST00000546386 DCAF12L2Q5VW00 463 aa10.3□□□□□ -0.76
CCDC38-202ENST00000546386 NOXA1Q86UR1 476 aa10.3□□□□□ -0.76
CCDC38-202ENST00000546386 SEC22AQ96IW7 307 aa10.3□□□□□ -0.76
CCDC38-202ENST00000546386 TMEM246Q9BRR3 403 aa10.3□□□□□ -0.76
CCDC38-202ENST00000546386 ZNF724A8MTY0 619 aa10.29□□□□□ -0.76
CCDC38-202ENST00000546386 FAM25EA8MYX2 175 aa10.29□□□□□ -0.76
CCDC38-202ENST00000546386 ZNF732B4DXR9 585 aa10.29□□□□□ -0.76
CCDC38-202ENST00000546386 GSTT2BP0CG30 244 aa10.29□□□□□ -0.76
CCDC38-202ENST00000546386 HIST1H1DP16402 221 aaKnown RBP10.29□□□□□ -0.76
CCDC38-202ENST00000546386 MPGP29372 298 aa10.29□□□□□ -0.76
CCDC38-202ENST00000546386 UBE2NP61088 152 aaKnown RBP10.29□□□□□ -0.76
CCDC38-202ENST00000546386 TSPAN5P62079 268 aa10.29□□□□□ -0.76
CCDC38-202ENST00000546386 HAGHLQ6PII5 290 aaPredicted RBP10.29□□□□□ -0.76
CCDC38-202ENST00000546386 BAIAP2L2Q6UXY1 529 aa10.29□□□□□ -0.76
CCDC38-202ENST00000546386 ZBTB8BQ8NAP8 495 aaPredicted RBP10.29□□□□□ -0.76
CCDC38-202ENST00000546386 OR4K15Q8NH41 348 aa10.29□□□□□ -0.76
CCDC38-202ENST00000546386 MARCH1Q8TCQ1 289 aa10.29□□□□□ -0.76
CCDC38-202ENST00000546386 THRSPQ92748 146 aa10.29□□□□□ -0.76
CCDC38-202ENST00000546386 BCL2L2Q92843 193 aaPredicted RBP10.29□□□□□ -0.76
CCDC38-202ENST00000546386 FN3KRPQ9HA64 309 aa10.29□□□□□ -0.76
CCDC38-202ENST00000546386 MGAT4CQ9UBM8 478 aa10.29□□□□□ -0.76
CCDC38-202ENST00000546386 ST3GAL6Q9Y274 331 aa10.29□□□□□ -0.76
CCDC38-202ENST00000546386 MYO18BQ8IUG5 2567 aa10.29□□□□□ -0.76
CCDC38-202ENST00000546386 EEF1E1-BLOC1S5C9J1V9 151 aa10.29□□□□□ -0.76
CCDC38-202ENST00000546386 HS3ST1O14792 307 aa10.29□□□□□ -0.76
CCDC38-202ENST00000546386 NDUFB6O95139 128 aa10.29□□□□□ -0.76
CCDC38-202ENST00000546386 CSF1P09603 554 aa10.29□□□□□ -0.76
CCDC38-202ENST00000546386 BCL3P20749 454 aa10.29□□□□□ -0.76
CCDC38-202ENST00000546386 THBS4P35443 961 aa10.29□□□□□ -0.76
CCDC38-202ENST00000546386 AP2S1P53680 142 aaPredicted RBP10.29□□□□□ -0.76
CCDC38-202ENST00000546386 ACSF3Q4G176 576 aaPredicted RBP10.29□□□□□ -0.76
CCDC38-202ENST00000546386 RNASE10Q5GAN6 216 aaKnown RBP10.29□□□□□ -0.76
CCDC38-202ENST00000546386 CLVS2Q5SYC1 327 aa10.29□□□□□ -0.76
CCDC38-202ENST00000546386 EGFL6Q8IUX8 553 aa10.29□□□□□ -0.76
CCDC38-202ENST00000546386 OR13C8Q8NGS7 320 aa10.29□□□□□ -0.76
CCDC38-202ENST00000546386 OR2T35Q8NGX2 323 aa10.29□□□□□ -0.76
CCDC38-202ENST00000546386 HPSE2Q8WWQ2 592 aa10.29□□□□□ -0.76
CCDC38-202ENST00000546386 PP6455Q8WZ26 134 aa10.29□□□□□ -0.76
CCDC38-202ENST00000546386 WBP1Q96G27 269 aa10.29□□□□□ -0.76
CCDC38-202ENST00000546386 C1QTNF5Q9BXJ0 243 aa10.29□□□□□ -0.76
CCDC38-202ENST00000546386 MSL2Q9HCI7 577 aa10.29□□□□□ -0.76
CCDC38-202ENST00000546386 TREM2Q9NZC2 230 aa10.29□□□□□ -0.76
CCDC38-202ENST00000546386 CLCF1Q9UBD9 225 aa10.29□□□□□ -0.76
CCDC38-202ENST00000546386 CELSR2Q9HCU4 2923 aa10.29□□□□□ -0.76
CCDC38-202ENST00000546386 SERPINA5P05154 406 aa10.28□□□□□ -0.76
CCDC38-202ENST00000546386 GRPP07492 148 aa10.28□□□□□ -0.76
CCDC38-202ENST00000546386 RPS27AP62979 156 aaKnown RBP10.28□□□□□ -0.76
CCDC38-202ENST00000546386 BCL2A1Q16548 175 aa10.28□□□□□ -0.76
CCDC38-202ENST00000546386 RTL6Q6ICC9 239 aa10.28□□□□□ -0.76
CCDC38-202ENST00000546386 C11orf88Q6PI97 169 aa10.28□□□□□ -0.76
CCDC38-202ENST00000546386 IGFL2Q6UWQ7 119 aa10.28□□□□□ -0.76
CCDC38-202ENST00000546386 KCTD9Q7L273 389 aa10.28□□□□□ -0.76
CCDC38-202ENST00000546386 SSC4DQ8WTU2 575 aa10.28□□□□□ -0.76
CCDC38-202ENST00000546386 ITPKCQ96DU7 683 aa10.28□□□□□ -0.76
CCDC38-202ENST00000546386 GMPPAQ96IJ6 420 aaPredicted RBP10.28□□□□□ -0.76
CCDC38-202ENST00000546386 CMTM3Q96MX0 182 aa10.28□□□□□ -0.76
CCDC38-202ENST00000546386 SULT4A1Q9BR01 284 aa10.28□□□□□ -0.76
CCDC38-202ENST00000546386 MRI1Q9BV20 369 aa10.28□□□□□ -0.76
CCDC38-202ENST00000546386 MGAT4AQ9UM21 535 aa10.28□□□□□ -0.76
CCDC38-202ENST00000546386 VSIG4Q9Y279 399 aa10.28□□□□□ -0.76
CCDC38-202ENST00000546386 DHRS7CA6NNS2 312 aa10.28□□□□□ -0.76
CCDC38-202ENST00000546386 CD300LBA8K4G0 201 aa10.28□□□□□ -0.76
CCDC38-202ENST00000546386 GOSR2O14653 212 aa10.28□□□□□ -0.76
CCDC38-202ENST00000546386 KNG1P01042 644 aa10.28□□□□□ -0.76
CCDC38-202ENST00000546386 MPV17P39210 176 aa10.28□□□□□ -0.76
CCDC38-202ENST00000546386 OR3A2P47893 321 aa10.28□□□□□ -0.76
CCDC38-202ENST00000546386 H2BFSP57053 126 aa10.28□□□□□ -0.76
CCDC38-202ENST00000546386 FAM27E3Q08E93 113 aa10.28□□□□□ -0.76
CCDC38-202ENST00000546386 HACD4Q5VWC8 232 aa10.28□□□□□ -0.76
CCDC38-202ENST00000546386 ZNF826PQ6ZT77 177 aa10.28□□□□□ -0.76
CCDC38-202ENST00000546386 PRR18Q8N4B5 295 aa10.28□□□□□ -0.76
CCDC38-202ENST00000546386 PRDM14Q9GZV8 571 aa10.28□□□□□ -0.76
CCDC38-202ENST00000546386 CST11Q9H112 138 aa10.28□□□□□ -0.76
CCDC38-202ENST00000546386 UFSP2Q9NUQ7 469 aa10.28□□□□□ -0.76
CCDC38-202ENST00000546386 IGSF10Q6WRI0 2623 aa10.28□□□□□ -0.76
CCDC38-202ENST00000546386 TNFSF13O75888 250 aa10.27□□□□□ -0.76
CCDC38-202ENST00000546386 IGHG3P01860 377 aa10.27□□□□□ -0.76
CCDC38-202ENST00000546386 IFNA6P05013 189 aa10.27□□□□□ -0.76
CCDC38-202ENST00000546386 ZNF735P0CB33 412 aa10.27□□□□□ -0.76
CCDC38-202ENST00000546386 CEBPDP49716 269 aaPredicted RBP10.27□□□□□ -0.76
CCDC38-202ENST00000546386 ZNF83P51522 516 aa10.27□□□□□ -0.76
CCDC38-202ENST00000546386 TAS2R19P59542 299 aa10.27□□□□□ -0.76
CCDC38-202ENST00000546386 RBMS2Q15434 407 aaKnown RBP10.27□□□□□ -0.76
CCDC38-202ENST00000546386 CSNK2A3Q8NEV1 391 aa10.27□□□□□ -0.76
CCDC38-202ENST00000546386 PPP1R14BQ96C90 147 aa10.27□□□□□ -0.76
CCDC38-202ENST00000546386 PECRQ9BY49 303 aa10.27□□□□□ -0.76
CCDC38-202ENST00000546386 FAM215AQ9Y5M1 114 aa10.27□□□□□ -0.76
CCDC38-202ENST00000546386 ANKHD1Q8IWZ3 2542 aaKnown RBP10.27□□□□□ -0.77
CCDC38-202ENST00000546386 SPG11Q96JI7 2443 aa10.27□□□□□ -0.77
CCDC38-202ENST00000546386 WDR1O75083 606 aa10.27□□□□□ -0.77
CCDC38-202ENST00000546386 APOC1P02654 83 aa10.27□□□□□ -0.77
CCDC38-202ENST00000546386 PRF1P14222 555 aa10.27□□□□□ -0.77
CCDC38-202ENST00000546386 AMY2BP19961 511 aa10.27□□□□□ -0.77
CCDC38-202ENST00000546386 ACTBP60709 375 aa10.27□□□□□ -0.77
CCDC38-202ENST00000546386 ACTG1P63261 375 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms