RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 SDHAP31040 664 aa12.17□□□□□ -0.46
CLSTN3-216ENST00000545663 SLC6A6P31641 620 aa12.17□□□□□ -0.46
CLSTN3-216ENST00000545663 GLYATL3Q5SZD4 288 aa12.17□□□□□ -0.46
CLSTN3-216ENST00000545663 TMEM200BQ69YZ2 307 aa12.17□□□□□ -0.46
CLSTN3-216ENST00000545663 DPY19L2P2Q6ZN68 376 aa12.17□□□□□ -0.46
CLSTN3-216ENST00000545663 LINC00346Q8IVM7 164 aa12.17□□□□□ -0.46
CLSTN3-216ENST00000545663 OSR2Q8N2R0 312 aa12.17□□□□□ -0.46
CLSTN3-216ENST00000545663 OR56B2PQ8NGI1 322 aa12.17□□□□□ -0.46
CLSTN3-216ENST00000545663 OR8S1Q8NH09 359 aa12.17□□□□□ -0.46
CLSTN3-216ENST00000545663 GPX7Q96SL4 187 aaPredicted RBP12.17□□□□□ -0.46
CLSTN3-216ENST00000545663 FEVQ99581 238 aa12.17□□□□□ -0.46
CLSTN3-216ENST00000545663 TM2D3Q9BRN9 247 aa12.17□□□□□ -0.46
CLSTN3-216ENST00000545663 DNTTIP1Q9H147 329 aa12.17□□□□□ -0.46
CLSTN3-216ENST00000545663 SYT4Q9H2B2 425 aa12.17□□□□□ -0.46
CLSTN3-216ENST00000545663 SIGLEC7Q9Y286 467 aa12.17□□□□□ -0.46
CLSTN3-216ENST00000545663 ORC6Q9Y5N6 252 aa12.17□□□□□ -0.46
CLSTN3-216ENST00000545663 FAM90A22PA8MWA6 464 aa12.16□□□□□ -0.46
CLSTN3-216ENST00000545663 CCL24O00175 119 aa12.16□□□□□ -0.46
CLSTN3-216ENST00000545663 CDC42EP2O14613 210 aa12.16□□□□□ -0.46
CLSTN3-216ENST00000545663 PTP4A3O75365 173 aa12.16□□□□□ -0.46
CLSTN3-216ENST00000545663 KHDRBS3O75525 346 aaKnown RBP12.16□□□□□ -0.46
CLSTN3-216ENST00000545663 GASTP01350 101 aa12.16□□□□□ -0.46
CLSTN3-216ENST00000545663 AMY1AP04745 511 aa12.16□□□□□ -0.46
CLSTN3-216ENST00000545663 AMY2AP04746 511 aa12.16□□□□□ -0.46
CLSTN3-216ENST00000545663 CD14P08571 375 aa12.16□□□□□ -0.46
CLSTN3-216ENST00000545663 NAA10P41227 235 aaPredicted RBP12.16□□□□□ -0.46
CLSTN3-216ENST00000545663 CENPAP49450 140 aa12.16□□□□□ -0.46
CLSTN3-216ENST00000545663 DYNLT3P51808 116 aa12.16□□□□□ -0.46
CLSTN3-216ENST00000545663 RPS6KA3P51812 740 aa12.16□□□□□ -0.46
CLSTN3-216ENST00000545663 SLC25A1P53007 311 aa12.16□□□□□ -0.46
CLSTN3-216ENST00000545663 SLC34A1Q06495 639 aa12.16□□□□□ -0.46
CLSTN3-216ENST00000545663 KCNMB1Q16558 191 aa12.16□□□□□ -0.46
CLSTN3-216ENST00000545663 RFX4Q33E94 735 aa12.16□□□□□ -0.46
CLSTN3-216ENST00000545663 TMEM185AQ8NFB2 350 aa12.16□□□□□ -0.46
CLSTN3-216ENST00000545663 OR9Q2Q8NGE9 314 aa12.16□□□□□ -0.46
CLSTN3-216ENST00000545663 OR13C2Q8NGS9 318 aa12.16□□□□□ -0.46
CLSTN3-216ENST00000545663 FANK1Q8TC84 345 aa12.16□□□□□ -0.46
CLSTN3-216ENST00000545663 FOXRED1Q96CU9 486 aaPredicted RBP12.16□□□□□ -0.46
CLSTN3-216ENST00000545663 PITX2Q99697 317 aa12.16□□□□□ -0.46
CLSTN3-216ENST00000545663 C9orf16Q9BUW7 83 aa12.16□□□□□ -0.46
CLSTN3-216ENST00000545663 GABARAPL1Q9H0R8 117 aa12.16□□□□□ -0.46
CLSTN3-216ENST00000545663 IL20Q9NYY1 176 aa12.16□□□□□ -0.46
CLSTN3-216ENST00000545663 GRHPRQ9UBQ7 328 aa12.16□□□□□ -0.46
CLSTN3-216ENST00000545663 CDH10Q9Y6N8 788 aa12.16□□□□□ -0.46
CLSTN3-216ENST00000545663 PSMB11A5LHX3 300 aa12.15□□□□□ -0.46
CLSTN3-216ENST00000545663 ODF3BA8MYP8 253 aa12.15□□□□□ -0.46
CLSTN3-216ENST00000545663 ANKRD65E5RJM6 399 aa12.15□□□□□ -0.46
CLSTN3-216ENST00000545663 ARPC3O15145 178 aa12.15□□□□□ -0.46
CLSTN3-216ENST00000545663 BAG2O95816 211 aa12.15□□□□□ -0.46
CLSTN3-216ENST00000545663 MYF6P23409 242 aa12.15□□□□□ -0.46
CLSTN3-216ENST00000545663 GABRA2P47869 451 aa12.15□□□□□ -0.46
CLSTN3-216ENST00000545663 GP2P55259 537 aaKnown RBP12.15□□□□□ -0.46
CLSTN3-216ENST00000545663 MZT1Q08AG7 82 aa12.15□□□□□ -0.46
CLSTN3-216ENST00000545663 DEFB136Q30KP8 78 aa12.15□□□□□ -0.46
CLSTN3-216ENST00000545663 AMIGO2Q86SJ2 522 aa12.15□□□□□ -0.46
CLSTN3-216ENST00000545663 GATAD1Q8WUU5 269 aa12.15□□□□□ -0.46
CLSTN3-216ENST00000545663 TSSK2Q96PF2 358 aa12.15□□□□□ -0.46
CLSTN3-216ENST00000545663 PRRG3Q9BZD7 231 aa12.15□□□□□ -0.46
CLSTN3-216ENST00000545663 NUAK2Q9H093 628 aa12.15□□□□□ -0.46
CLSTN3-216ENST00000545663 IGKV1D-17A0A075B6S4 117 aa12.14□□□□□ -0.47
CLSTN3-216ENST00000545663 XKRYO14609 159 aa12.14□□□□□ -0.47
CLSTN3-216ENST00000545663 AKR7A2O43488 359 aa12.14□□□□□ -0.47
CLSTN3-216ENST00000545663 HCKP08631 526 aa12.14□□□□□ -0.47
CLSTN3-216ENST00000545663 OSMP13725 252 aa12.14□□□□□ -0.47
CLSTN3-216ENST00000545663 ENTPD1P49961 510 aa12.14□□□□□ -0.47
CLSTN3-216ENST00000545663 ESRRGP62508 458 aa12.14□□□□□ -0.47
CLSTN3-216ENST00000545663 PPP1R8Q12972 351 aaKnown RBP12.14□□□□□ -0.47
CLSTN3-216ENST00000545663 RCN1Q15293 331 aa12.14□□□□□ -0.47
CLSTN3-216ENST00000545663 ZNF260Q3ZCT1 412 aa12.14□□□□□ -0.47
CLSTN3-216ENST00000545663 C9orf152Q5JTZ5 239 aa12.14□□□□□ -0.47
CLSTN3-216ENST00000545663 FAHD1Q6P587 224 aa12.14□□□□□ -0.47
CLSTN3-216ENST00000545663 ADCK1Q86TW2 530 aa12.14□□□□□ -0.47
CLSTN3-216ENST00000545663 EGFL6Q8IUX8 553 aa12.14□□□□□ -0.47
CLSTN3-216ENST00000545663 SLC26A10Q8NG04 563 aa12.14□□□□□ -0.47
CLSTN3-216ENST00000545663 OR4M1Q8NGD0 313 aa12.14□□□□□ -0.47
CLSTN3-216ENST00000545663 TEX47Q8TBZ9 253 aa12.14□□□□□ -0.47
CLSTN3-216ENST00000545663 EME1Q96AY2 570 aa12.14□□□□□ -0.47
CLSTN3-216ENST00000545663 ATF6BQ99941 703 aa12.14□□□□□ -0.47
CLSTN3-216ENST00000545663 OR52D1Q9H346 318 aa12.14□□□□□ -0.47
CLSTN3-216ENST00000545663 PNRC2Q9NPJ4 139 aaKnown RBP12.14□□□□□ -0.47
CLSTN3-216ENST00000545663 NRIP3Q9NQ35 241 aa12.14□□□□□ -0.47
CLSTN3-216ENST00000545663 PAPOLBQ9NRJ5 636 aaKnown RBP12.14□□□□□ -0.47
CLSTN3-216ENST00000545663 KRT84Q9NSB2 600 aa12.14□□□□□ -0.47
CLSTN3-216ENST00000545663 OAZ3Q9UMX2 235 aa12.14□□□□□ -0.47
CLSTN3-216ENST00000545663 TBL2Q9Y4P3 447 aaKnown RBP12.14□□□□□ -0.47
CLSTN3-216ENST00000545663 IGLV1-36A0A0B4J1U3 117 aa12.13□□□□□ -0.47
CLSTN3-216ENST00000545663 OR2AT4A6NND4 320 aa12.13□□□□□ -0.47
CLSTN3-216ENST00000545663 H3BN98 237 aa12.13□□□□□ -0.47
CLSTN3-216ENST00000545663 DCTN6O00399 190 aa12.13□□□□□ -0.47
CLSTN3-216ENST00000545663 AZGP1P25311 298 aaKnown RBP12.13□□□□□ -0.47
CLSTN3-216ENST00000545663 NOS3P29474 1203 aa12.13□□□□□ -0.47
CLSTN3-216ENST00000545663 RIPK1Q13546 671 aa12.13□□□□□ -0.47
CLSTN3-216ENST00000545663 SLC18B1Q6NT16 456 aa12.13□□□□□ -0.47
CLSTN3-216ENST00000545663 FAM122BQ7Z309 247 aa12.13□□□□□ -0.47
CLSTN3-216ENST00000545663 ZNF695Q8IW36 515 aa12.13□□□□□ -0.47
CLSTN3-216ENST00000545663 OR2T33Q8NG76 320 aa12.13□□□□□ -0.47
CLSTN3-216ENST00000545663 OR5M8Q8NGP6 311 aa12.13□□□□□ -0.47
CLSTN3-216ENST00000545663 RPL3LQ92901 407 aaKnown RBP12.13□□□□□ -0.47
CLSTN3-216ENST00000545663 IFT27Q9BW83 186 aa12.13□□□□□ -0.47
CLSTN3-216ENST00000545663 VCXQ9H320 206 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms