RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 Q6ZSR3 168 aa17.29■□□□□ 0.36
SCARB1-210ENST00000545493 TBX5Q99593 518 aa17.29■□□□□ 0.36
SCARB1-210ENST00000545493 GABARAPL3Q9BY60 117 aa17.29■□□□□ 0.36
SCARB1-210ENST00000545493 PRKDCP78527 4128 aaKnown RBP17.29■□□□□ 0.36
SCARB1-210ENST00000545493 VWFP04275 2813 aa17.29■□□□□ 0.36
SCARB1-210ENST00000545493 APOL3O95236 402 aa17.28■□□□□ 0.36
SCARB1-210ENST00000545493 FCGR1AP12314 374 aa17.28■□□□□ 0.36
SCARB1-210ENST00000545493 CCL1P22362 96 aa17.28■□□□□ 0.36
SCARB1-210ENST00000545493 SAA4P35542 130 aa17.28■□□□□ 0.36
SCARB1-210ENST00000545493 POLR2IP36954 125 aaKnown RBP17.28■□□□□ 0.36
SCARB1-210ENST00000545493 HAAOP46952 286 aa17.28■□□□□ 0.36
SCARB1-210ENST00000545493 KRTAP10-3P60369 221 aa17.28■□□□□ 0.36
SCARB1-210ENST00000545493 SMIM21Q3B7S5 101 aa17.28■□□□□ 0.36
SCARB1-210ENST00000545493 CLVS2Q5SYC1 327 aa17.28■□□□□ 0.36
SCARB1-210ENST00000545493 TREML4Q6UXN2 200 aa17.28■□□□□ 0.36
SCARB1-210ENST00000545493 BATF2Q8N1L9 274 aa17.28■□□□□ 0.36
SCARB1-210ENST00000545493 ZNF671Q8TAW3 534 aa17.28■□□□□ 0.36
SCARB1-210ENST00000545493 NPRL2Q8WTW4 380 aa17.28■□□□□ 0.36
SCARB1-210ENST00000545493 C19orf12Q9NSK7 152 aa17.28■□□□□ 0.36
SCARB1-210ENST00000545493 H2AFY2Q9P0M6 372 aaPredicted RBP17.28■□□□□ 0.36
SCARB1-210ENST00000545493 ENOPH1Q9UHY7 261 aa17.28■□□□□ 0.36
SCARB1-210ENST00000545493 SLC22A13Q9Y226 551 aa17.28■□□□□ 0.36
SCARB1-210ENST00000545493 SNX5Q9Y5X3 404 aa17.28■□□□□ 0.36
SCARB1-210ENST00000545493 TRBV23-1A0A0A0MS06 115 aa17.27■□□□□ 0.36
SCARB1-210ENST00000545493 PQLC2LA1A4F0 135 aa17.27■□□□□ 0.36
SCARB1-210ENST00000545493 A6NIN4 97 aa17.27■□□□□ 0.36
SCARB1-210ENST00000545493 DLGAP1O14490 977 aa17.27■□□□□ 0.36
SCARB1-210ENST00000545493 CEBPDP49716 269 aaPredicted RBP17.27■□□□□ 0.36
SCARB1-210ENST00000545493 C17orf107Q6ZR85 190 aa17.27■□□□□ 0.36
SCARB1-210ENST00000545493 C1orf122Q6ZSJ8 110 aa17.27■□□□□ 0.36
SCARB1-210ENST00000545493 FAM185AQ8N0U4 392 aa17.27■□□□□ 0.36
SCARB1-210ENST00000545493 CD177Q8N6Q3 437 aa17.27■□□□□ 0.36
SCARB1-210ENST00000545493 CITED1Q99966 193 aa17.27■□□□□ 0.36
SCARB1-210ENST00000545493 NRIP2Q9BQI9 281 aa17.27■□□□□ 0.36
SCARB1-210ENST00000545493 METTL8Q9H825 291 aaKnown RBP17.27■□□□□ 0.36
SCARB1-210ENST00000545493 RASL12Q9NYN1 266 aa17.27■□□□□ 0.36
SCARB1-210ENST00000545493 WARS2Q9UGM6 360 aaKnown RBP17.27■□□□□ 0.36
SCARB1-210ENST00000545493 VPREB3Q9UKI3 123 aa17.27■□□□□ 0.36
SCARB1-210ENST00000545493 OAZ3Q9UMX2 235 aa17.27■□□□□ 0.36
SCARB1-210ENST00000545493 CAB39Q9Y376 341 aaPredicted RBP17.27■□□□□ 0.36
SCARB1-210ENST00000545493 FAM96BQ9Y3D0 163 aa17.27■□□□□ 0.36
SCARB1-210ENST00000545493 RFPL4AA6NLU0 287 aa17.26■□□□□ 0.35
SCARB1-210ENST00000545493 DHRS7CA6NNS2 312 aa17.26■□□□□ 0.35
SCARB1-210ENST00000545493 RFPL4AL1F8VTS6 287 aa17.26■□□□□ 0.35
SCARB1-210ENST00000545493 RPP14O95059 124 aaKnown RBP17.26■□□□□ 0.35
SCARB1-210ENST00000545493 EEF1B2P24534 225 aaKnown RBP17.26■□□□□ 0.35
SCARB1-210ENST00000545493 HTR1FP30939 366 aa17.26■□□□□ 0.35
SCARB1-210ENST00000545493 RASSF2P50749 326 aa17.26■□□□□ 0.35
SCARB1-210ENST00000545493 UBE2E1P51965 193 aa17.26■□□□□ 0.35
SCARB1-210ENST00000545493 NCR3LG1Q68D85 454 aa17.26■□□□□ 0.35
SCARB1-210ENST00000545493 BRICD5Q6PL45 260 aa17.26■□□□□ 0.35
SCARB1-210ENST00000545493 Q6ZSV7 163 aa17.26■□□□□ 0.35
SCARB1-210ENST00000545493 CATSPERDQ86XM0 798 aa17.26■□□□□ 0.35
SCARB1-210ENST00000545493 ZNF573Q86YE8 665 aa17.26■□□□□ 0.35
SCARB1-210ENST00000545493 CALHM1Q8IU99 346 aa17.26■□□□□ 0.35
SCARB1-210ENST00000545493 LINC01006Q8NI28 216 aa17.26■□□□□ 0.35
SCARB1-210ENST00000545493 DPAGT1Q9H3H5 408 aa17.26■□□□□ 0.35
SCARB1-210ENST00000545493 RIBC2Q9H4K1 309 aa17.26■□□□□ 0.35
SCARB1-210ENST00000545493 HES4Q9HCC6 221 aa17.26■□□□□ 0.35
SCARB1-210ENST00000545493 A0A1W2PQL4 384 aaPredicted RBP17.25■□□□□ 0.35
SCARB1-210ENST00000545493 MEIOCA2RUB1 952 aa17.25■□□□□ 0.35
SCARB1-210ENST00000545493 KCNAB3O43448 404 aa17.25■□□□□ 0.35
SCARB1-210ENST00000545493 NOS1APO75052 506 aaPredicted RBP17.25■□□□□ 0.35
SCARB1-210ENST00000545493 ATP5HO75947 161 aa17.25■□□□□ 0.35
SCARB1-210ENST00000545493 MPZP25189 248 aa17.25■□□□□ 0.35
SCARB1-210ENST00000545493 CAPZA1P52907 286 aa17.25■□□□□ 0.35
SCARB1-210ENST00000545493 ACTR3P61158 418 aa17.25■□□□□ 0.35
SCARB1-210ENST00000545493 ODF4Q2M2E3 257 aa17.25■□□□□ 0.35
SCARB1-210ENST00000545493 GDPGP1Q6ZNW5 385 aa17.25■□□□□ 0.35
SCARB1-210ENST00000545493 ASRGL1Q7L266 308 aa17.25■□□□□ 0.35
SCARB1-210ENST00000545493 YIPF7Q8N8F6 280 aa17.25■□□□□ 0.35
SCARB1-210ENST00000545493 C17orf50Q8WW18 174 aa17.25■□□□□ 0.35
SCARB1-210ENST00000545493 POLDIP2Q9Y2S7 368 aa17.25■□□□□ 0.35
SCARB1-210ENST00000545493 RNF114Q9Y508 228 aa17.25■□□□□ 0.35
SCARB1-210ENST00000545493 SAC3D1A6NKF1 404 aa17.24■□□□□ 0.35
SCARB1-210ENST00000545493 H3BSH0 61 aa17.24■□□□□ 0.35
SCARB1-210ENST00000545493 KRT8P05787 483 aa17.24■□□□□ 0.35
SCARB1-210ENST00000545493 PROK1P58294 105 aa17.24■□□□□ 0.35
SCARB1-210ENST00000545493 RORBQ92753 470 aa17.24■□□□□ 0.35
SCARB1-210ENST00000545493 CENPNQ96H22 339 aaPredicted RBP17.24■□□□□ 0.35
SCARB1-210ENST00000545493 ANKRD61A6NGH8 418 aa17.23■□□□□ 0.35
SCARB1-210ENST00000545493 NXPH2O95156 264 aa17.23■□□□□ 0.35
SCARB1-210ENST00000545493 OR2T7P0C7T2 308 aa17.23■□□□□ 0.35
SCARB1-210ENST00000545493 ACSM1Q08AH1 577 aa17.23■□□□□ 0.35
SCARB1-210ENST00000545493 BLMHQ13867 455 aa17.23■□□□□ 0.35
SCARB1-210ENST00000545493 DHRS7BQ6IAN0 325 aaPredicted RBP17.23■□□□□ 0.35
SCARB1-210ENST00000545493 ZNF561Q8N587 486 aa17.23■□□□□ 0.35
SCARB1-210ENST00000545493 ZSCAN4Q8NAM6 433 aaPredicted RBP17.23■□□□□ 0.35
SCARB1-210ENST00000545493 OR10H4Q8NGA5 316 aa17.23■□□□□ 0.35
SCARB1-210ENST00000545493 OR8J1Q8NGP2 316 aa17.23■□□□□ 0.35
SCARB1-210ENST00000545493 OR2T27Q8NH04 317 aa17.23■□□□□ 0.35
SCARB1-210ENST00000545493 TRMT10AQ8TBZ6 339 aaKnown RBP17.23■□□□□ 0.35
SCARB1-210ENST00000545493 EME1Q96AY2 570 aa17.23■□□□□ 0.35
SCARB1-210ENST00000545493 AJUBAQ96IF1 538 aa17.23■□□□□ 0.35
SCARB1-210ENST00000545493 OSBPL10Q9BXB5 764 aa17.23■□□□□ 0.35
SCARB1-210ENST00000545493 BTBD17A6NE02 478 aa17.22■□□□□ 0.35
SCARB1-210ENST00000545493 H0YAE9 185 aa17.22■□□□□ 0.35
SCARB1-210ENST00000545493 SLC1A7O00341 560 aa17.22■□□□□ 0.35
SCARB1-210ENST00000545493 ANGPTL7O43827 346 aa17.22■□□□□ 0.35
SCARB1-210ENST00000545493 CLPXO76031 633 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms