RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 C1orf147Q96MC9 270 aaPredicted RBP13.45□□□□□ -0.26
CNOT9-208ENST00000542068 UCK1Q9HA47 277 aa13.45□□□□□ -0.26
CNOT9-208ENST00000542068 MEMO1Q9Y316 297 aa13.45□□□□□ -0.26
CNOT9-208ENST00000542068 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.45□□□□□ -0.26
CNOT9-208ENST00000542068 LIPT2A6NK58 231 aa13.45□□□□□ -0.26
CNOT9-208ENST00000542068 ZNF850A8MQ14 1090 aa13.45□□□□□ -0.26
CNOT9-208ENST00000542068 IFNA2P01563 188 aa13.45□□□□□ -0.26
CNOT9-208ENST00000542068 PET100P0DJ07 73 aa13.45□□□□□ -0.26
CNOT9-208ENST00000542068 ZNF17P17021 662 aa13.45□□□□□ -0.26
CNOT9-208ENST00000542068 PTAFRP25105 342 aa13.45□□□□□ -0.26
CNOT9-208ENST00000542068 CAMLGP49069 296 aa13.45□□□□□ -0.26
CNOT9-208ENST00000542068 TAF9Q16594 264 aa13.45□□□□□ -0.26
CNOT9-208ENST00000542068 DEGS2Q6QHC5 323 aa13.45□□□□□ -0.26
CNOT9-208ENST00000542068 DTX1Q86Y01 620 aa13.45□□□□□ -0.26
CNOT9-208ENST00000542068 SLC25A43Q8WUT9 341 aaPredicted RBP13.45□□□□□ -0.26
CNOT9-208ENST00000542068 AQP10Q96PS8 301 aa13.45□□□□□ -0.26
CNOT9-208ENST00000542068 A0A1W2PPE2 198 aa13.44□□□□□ -0.26
CNOT9-208ENST00000542068 OR5H15A6NDH6 313 aa13.44□□□□□ -0.26
CNOT9-208ENST00000542068 TRAPPC6AO75865 159 aa13.44□□□□□ -0.26
CNOT9-208ENST00000542068 NXPH3O95157 252 aa13.44□□□□□ -0.26
CNOT9-208ENST00000542068 FABP1P07148 127 aa13.44□□□□□ -0.26
CNOT9-208ENST00000542068 CCL4P13236 92 aa13.44□□□□□ -0.26
CNOT9-208ENST00000542068 GGNBP1Q5YKI7 109 aa13.44□□□□□ -0.26
CNOT9-208ENST00000542068 MISPQ8IVT2 679 aa13.44□□□□□ -0.26
CNOT9-208ENST00000542068 SPEM1Q8N4L4 309 aa13.44□□□□□ -0.26
CNOT9-208ENST00000542068 HIST1H2BAQ96A08 127 aa13.44□□□□□ -0.26
CNOT9-208ENST00000542068 FAAP24Q9BTP7 215 aa13.44□□□□□ -0.26
CNOT9-208ENST00000542068 SH3BGRL3Q9H299 93 aa13.44□□□□□ -0.26
CNOT9-208ENST00000542068 ZNF160Q9HCG1 818 aa13.44□□□□□ -0.26
CNOT9-208ENST00000542068 MCTS1Q9ULC4 181 aaKnown RBP13.44□□□□□ -0.26
CNOT9-208ENST00000542068 PUS1Q9Y606 427 aaKnown RBP eCLIP13.44□□□□□ -0.26
CNOT9-208ENST00000542068 FAM230AA0A1W2PPH8 454 aa13.44□□□□□ -0.26
CNOT9-208ENST00000542068 C7orf77A4D0Y5 90 aa13.44□□□□□ -0.26
CNOT9-208ENST00000542068 H3BMH7 237 aa13.44□□□□□ -0.26
CNOT9-208ENST00000542068 MFNGO00587 321 aa13.44□□□□□ -0.26
CNOT9-208ENST00000542068 SPRY1O43609 319 aaPredicted RBP13.44□□□□□ -0.26
CNOT9-208ENST00000542068 TBPP20226 339 aa13.44□□□□□ -0.26
CNOT9-208ENST00000542068 NCMAPQ5T1S8 102 aa13.44□□□□□ -0.26
CNOT9-208ENST00000542068 C17orf82Q86X59 251 aaPredicted RBP13.44□□□□□ -0.26
CNOT9-208ENST00000542068 SUMF1Q8NBK3 374 aa13.44□□□□□ -0.26
CNOT9-208ENST00000542068 OR9K2Q8NGE7 335 aa13.44□□□□□ -0.26
CNOT9-208ENST00000542068 HLA-CQ95604 372 aa13.44□□□□□ -0.26
CNOT9-208ENST00000542068 SCGB3A2Q96PL1 93 aa13.44□□□□□ -0.26
CNOT9-208ENST00000542068 B3GAT1Q9P2W7 334 aa13.44□□□□□ -0.26
CNOT9-208ENST00000542068 IFNA21P01568 189 aa13.44□□□□□ -0.26
CNOT9-208ENST00000542068 IGHV3-9P01782 118 aa13.44□□□□□ -0.26
CNOT9-208ENST00000542068 IGHMP01871 453 aa13.44□□□□□ -0.26
CNOT9-208ENST00000542068 NAT2P11245 290 aa13.44□□□□□ -0.26
CNOT9-208ENST00000542068 OMGP23515 440 aa13.44□□□□□ -0.26
CNOT9-208ENST00000542068 HLA-BQ31612 363 aa13.44□□□□□ -0.26
CNOT9-208ENST00000542068 VAX1Q5SQQ9 334 aa13.44□□□□□ -0.26
CNOT9-208ENST00000542068 SGPP2Q8IWX5 399 aa13.44□□□□□ -0.26
CNOT9-208ENST00000542068 OR5L1Q8NGL2 311 aa13.44□□□□□ -0.26
CNOT9-208ENST00000542068 ST8SIA1Q92185 356 aa13.44□□□□□ -0.26
CNOT9-208ENST00000542068 SLAMF9Q96A28 289 aa13.44□□□□□ -0.26
CNOT9-208ENST00000542068 SMIM8Q96KF7 97 aa13.44□□□□□ -0.26
CNOT9-208ENST00000542068 CNTNAP3Q9BZ76 1288 aa13.44□□□□□ -0.26
CNOT9-208ENST00000542068 PRDM6Q9NQX0 595 aa13.44□□□□□ -0.26
CNOT9-208ENST00000542068 GPR173Q9NS66 373 aa13.44□□□□□ -0.26
CNOT9-208ENST00000542068 KLK3P07288 261 aaPredicted RBP13.43□□□□□ -0.26
CNOT9-208ENST00000542068 PATE4P0C8F1 98 aa13.43□□□□□ -0.26
CNOT9-208ENST00000542068 PNLIPP16233 465 aa13.43□□□□□ -0.26
CNOT9-208ENST00000542068 PCK2Q16822 640 aa13.43□□□□□ -0.26
CNOT9-208ENST00000542068 C10orf91Q5T1B1 145 aa13.43□□□□□ -0.26
CNOT9-208ENST00000542068 MEX3BQ6ZN04 569 aaKnown RBP13.43□□□□□ -0.26
CNOT9-208ENST00000542068 PLPP5Q8NEB5 264 aa13.43□□□□□ -0.26
CNOT9-208ENST00000542068 SLC22A8Q8TCC7 542 aa13.43□□□□□ -0.26
CNOT9-208ENST00000542068 RASL10BQ96S79 203 aa13.43□□□□□ -0.26
CNOT9-208ENST00000542068 PRRX2Q99811 253 aa13.43□□□□□ -0.26
CNOT9-208ENST00000542068 PECRQ9BY49 303 aa13.43□□□□□ -0.26
CNOT9-208ENST00000542068 GHRLQ9UBU3 117 aa13.43□□□□□ -0.26
CNOT9-208ENST00000542068 LRP4O75096 1905 aa13.43□□□□□ -0.26
CNOT9-208ENST00000542068 IGHV5-10-1A0A0J9YXX1 117 aa13.43□□□□□ -0.26
CNOT9-208ENST00000542068 SCGNO76038 276 aa13.43□□□□□ -0.26
CNOT9-208ENST00000542068 FCGR3AP08637 254 aa13.43□□□□□ -0.26
CNOT9-208ENST00000542068 CLINT1Q14677 625 aa13.43□□□□□ -0.26
CNOT9-208ENST00000542068 PNLIPRP3Q17RR3 467 aa13.43□□□□□ -0.26
CNOT9-208ENST00000542068 OR2AE1Q8NHA4 323 aa13.43□□□□□ -0.26
CNOT9-208ENST00000542068 UCN2Q96RP3 112 aa13.43□□□□□ -0.26
CNOT9-208ENST00000542068 OSGIN2Q9Y236 505 aa13.43□□□□□ -0.26
CNOT9-208ENST00000542068 PIGLQ9Y2B2 252 aa13.43□□□□□ -0.26
CNOT9-208ENST00000542068 PDGFBP01127 241 aaPredicted RBP13.42□□□□□ -0.26
CNOT9-208ENST00000542068 CD37P11049 281 aa13.42□□□□□ -0.26
CNOT9-208ENST00000542068 SPINK2P20155 84 aa13.42□□□□□ -0.26
CNOT9-208ENST00000542068 OTX2P32243 289 aa13.42□□□□□ -0.26
CNOT9-208ENST00000542068 FAM209BQ5JX69 171 aa13.42□□□□□ -0.26
CNOT9-208ENST00000542068 GPHA2Q96T91 129 aa13.42□□□□□ -0.26
CNOT9-208ENST00000542068 C1orf123Q9NWV4 160 aa13.42□□□□□ -0.26
CNOT9-208ENST00000542068 PLEK2Q9NYT0 353 aa13.42□□□□□ -0.26
CNOT9-208ENST00000542068 CACFD1Q9UGQ2 172 aa13.42□□□□□ -0.26
CNOT9-208ENST00000542068 ZNF407Q9C0G0 2248 aa13.42□□□□□ -0.26
CNOT9-208ENST00000542068 PTPRZ1P23471 2315 aaPredicted RBP13.42□□□□□ -0.26
CNOT9-208ENST00000542068 ARPC4-TTLL3A0A0A6YYG9 625 aa13.42□□□□□ -0.26
CNOT9-208ENST00000542068 MPZP25189 248 aa13.42□□□□□ -0.26
CNOT9-208ENST00000542068 PIGPP57054 158 aa13.42□□□□□ -0.26
CNOT9-208ENST00000542068 RPS18P62269 152 aaKnown RBP13.42□□□□□ -0.26
CNOT9-208ENST00000542068 EIF5AP63241 154 aaKnown RBP13.42□□□□□ -0.26
CNOT9-208ENST00000542068 UBE2V2Q15819 145 aa13.42□□□□□ -0.26
CNOT9-208ENST00000542068 ABCA11PQ4W5N1 156 aa13.42□□□□□ -0.26
CNOT9-208ENST00000542068 C9orf135Q5VTT2 229 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms