RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 OR2AT4A6NND4 320 aa10.86□□□□□ -0.67
LTBR-208ENST00000541005 GNAO1P09471 354 aa10.86□□□□□ -0.67
LTBR-208ENST00000541005 CCDC159P0C7I6 412 aa10.86□□□□□ -0.67
LTBR-208ENST00000541005 DUX4L2P0CJ85 424 aa10.86□□□□□ -0.67
LTBR-208ENST00000541005 DUX4L3P0CJ86 424 aa10.86□□□□□ -0.67
LTBR-208ENST00000541005 DUX4L4P0CJ87 422 aa10.86□□□□□ -0.67
LTBR-208ENST00000541005 DUX4L5P0CJ88 424 aa10.86□□□□□ -0.67
LTBR-208ENST00000541005 DUX4L6P0CJ89 424 aa10.86□□□□□ -0.67
LTBR-208ENST00000541005 DUX4L7P0CJ90 424 aa10.86□□□□□ -0.67
LTBR-208ENST00000541005 PIPP12273 146 aaPredicted RBP10.86□□□□□ -0.67
LTBR-208ENST00000541005 GLRA1P23415 457 aa10.86□□□□□ -0.67
LTBR-208ENST00000541005 SLC34A1Q06495 639 aa10.86□□□□□ -0.67
LTBR-208ENST00000541005 IL24Q13007 206 aa10.86□□□□□ -0.67
LTBR-208ENST00000541005 CNN3Q15417 329 aaKnown RBP10.86□□□□□ -0.67
LTBR-208ENST00000541005 SMIM21Q3B7S5 101 aa10.86□□□□□ -0.67
LTBR-208ENST00000541005 DUX4L9Q6RFH8 374 aaPredicted RBP10.86□□□□□ -0.67
LTBR-208ENST00000541005 FAM216BQ8N7L0 139 aa10.86□□□□□ -0.67
LTBR-208ENST00000541005 DNAAF1Q8NEP3 725 aa10.86□□□□□ -0.67
LTBR-208ENST00000541005 TMIGD2Q96BF3 282 aa10.86□□□□□ -0.67
LTBR-208ENST00000541005 ADAT3Q96EY9 351 aaPredicted RBP10.86□□□□□ -0.67
LTBR-208ENST00000541005 GAFA1Q96PS6 74 aa10.86□□□□□ -0.67
LTBR-208ENST00000541005 HES4Q9HCC6 221 aa10.86□□□□□ -0.67
LTBR-208ENST00000541005 DUX4Q9UBX2 424 aa10.86□□□□□ -0.67
LTBR-208ENST00000541005 NUP50Q9UKX7 468 aa10.86□□□□□ -0.67
LTBR-208ENST00000541005 DIMT1Q9UNQ2 313 aaKnown RBP10.86□□□□□ -0.67
LTBR-208ENST00000541005 SLC7A11Q9UPY5 501 aa10.86□□□□□ -0.67
LTBR-208ENST00000541005 CAB39Q9Y376 341 aaPredicted RBP10.86□□□□□ -0.67
LTBR-208ENST00000541005 IGKV1D-17A0A075B6S4 117 aa10.85□□□□□ -0.67
LTBR-208ENST00000541005 IGKV1-27A0A075B6S5 117 aa10.85□□□□□ -0.67
LTBR-208ENST00000541005 E9PI62 339 aa10.85□□□□□ -0.67
LTBR-208ENST00000541005 H0YJX3 145 aa10.85□□□□□ -0.67
LTBR-208ENST00000541005 H3BSH0 61 aa10.85□□□□□ -0.67
LTBR-208ENST00000541005 SIGLEC5O15389 551 aa10.85□□□□□ -0.67
LTBR-208ENST00000541005 SYNGR1O43759 233 aa10.85□□□□□ -0.67
LTBR-208ENST00000541005 ZFPL1O95159 310 aa10.85□□□□□ -0.67
LTBR-208ENST00000541005 PLATP00750 562 aa10.85□□□□□ -0.67
LTBR-208ENST00000541005 SERPINA3P01011 423 aa10.85□□□□□ -0.67
LTBR-208ENST00000541005 FUT6P51993 359 aa10.85□□□□□ -0.67
LTBR-208ENST00000541005 ERVK11-1P61568 191 aa10.85□□□□□ -0.67
LTBR-208ENST00000541005 IL13RA1P78552 427 aa10.85□□□□□ -0.67
LTBR-208ENST00000541005 CCDC58Q4VC31 144 aa10.85□□□□□ -0.67
LTBR-208ENST00000541005 LRRC10Q5BKY1 277 aa10.85□□□□□ -0.67
LTBR-208ENST00000541005 LAIR2Q6ISS4 152 aa10.85□□□□□ -0.67
LTBR-208ENST00000541005 ACP7Q6ZNF0 438 aa10.85□□□□□ -0.67
LTBR-208ENST00000541005 C9orf139Q6ZV77 190 aa10.85□□□□□ -0.67
LTBR-208ENST00000541005 BTN2A1Q7KYR7 527 aa10.85□□□□□ -0.67
LTBR-208ENST00000541005 CALHM1Q8IU99 346 aa10.85□□□□□ -0.67
LTBR-208ENST00000541005 C8orf59Q8N0T1 100 aaPredicted RBP10.85□□□□□ -0.67
LTBR-208ENST00000541005 PNLDC1Q8NA58 520 aaKnown RBP10.85□□□□□ -0.67
LTBR-208ENST00000541005 OR51A4Q8NGJ6 313 aa10.85□□□□□ -0.67
LTBR-208ENST00000541005 OR10AC1Q8NH08 325 aa10.85□□□□□ -0.67
LTBR-208ENST00000541005 C8orf46Q8TAG6 207 aa10.85□□□□□ -0.67
LTBR-208ENST00000541005 TFAP2CQ92754 450 aa10.85□□□□□ -0.67
LTBR-208ENST00000541005 SDSLQ96GA7 329 aa10.85□□□□□ -0.67
LTBR-208ENST00000541005 MED30Q96HR3 178 aa10.85□□□□□ -0.67
LTBR-208ENST00000541005 SNTG1Q9NSN8 517 aa10.85□□□□□ -0.67
LTBR-208ENST00000541005 RPUSD1Q9UJJ7 312 aaKnown RBP10.85□□□□□ -0.67
LTBR-208ENST00000541005 EXOSC1Q9Y3B2 195 aaKnown RBP10.85□□□□□ -0.67
LTBR-208ENST00000541005 KIAA2026Q5HYC2 2103 aa10.84□□□□□ -0.67
LTBR-208ENST00000541005 IGKV1-9A0A0C4DH69 117 aa10.84□□□□□ -0.67
LTBR-208ENST00000541005 ERICH4A6NGS2 130 aa10.84□□□□□ -0.67
LTBR-208ENST00000541005 RNF212BA8MTL3 300 aa10.84□□□□□ -0.67
LTBR-208ENST00000541005 ZNF879B4DU55 563 aa10.84□□□□□ -0.67
LTBR-208ENST00000541005 NDUFB3O43676 98 aa10.84□□□□□ -0.67
LTBR-208ENST00000541005 MT-ND2P03891 347 aa10.84□□□□□ -0.67
LTBR-208ENST00000541005 PSG2P11465 335 aa10.84□□□□□ -0.67
LTBR-208ENST00000541005 MMP9P14780 707 aa10.84□□□□□ -0.67
LTBR-208ENST00000541005 MYL12AP19105 171 aa10.84□□□□□ -0.67
LTBR-208ENST00000541005 ETV1P50549 477 aa10.84□□□□□ -0.67
LTBR-208ENST00000541005 GBX2P52951 348 aaPredicted RBP10.84□□□□□ -0.67
LTBR-208ENST00000541005 CAV3P56539 151 aa10.84□□□□□ -0.67
LTBR-208ENST00000541005 HILS1P60008 231 aa10.84□□□□□ -0.67
LTBR-208ENST00000541005 GMFBP60983 142 aa10.84□□□□□ -0.67
LTBR-208ENST00000541005 FGF12P61328 243 aa10.84□□□□□ -0.67
LTBR-208ENST00000541005 DGUOKQ16854 277 aa10.84□□□□□ -0.67
LTBR-208ENST00000541005 KRTAP24-1Q3LI83 254 aa10.84□□□□□ -0.67
LTBR-208ENST00000541005 FGFRL1Q8N441 504 aa10.84□□□□□ -0.67
LTBR-208ENST00000541005 ZNF676Q8N7Q3 588 aa10.84□□□□□ -0.67
LTBR-208ENST00000541005 LY6G5BQ8NDX9 201 aa10.84□□□□□ -0.67
LTBR-208ENST00000541005 OR5T2Q8NGG2 359 aa10.84□□□□□ -0.67
LTBR-208ENST00000541005 TRMT10AQ8TBZ6 339 aaKnown RBP10.84□□□□□ -0.67
LTBR-208ENST00000541005 ZNF418Q8TF45 676 aaPredicted RBP10.84□□□□□ -0.67
LTBR-208ENST00000541005 ZFAND2BQ8WV99 257 aa10.84□□□□□ -0.67
LTBR-208ENST00000541005 NRG4Q8WWG1 115 aa10.84□□□□□ -0.67
LTBR-208ENST00000541005 ST8SIA4Q92187 359 aa10.84□□□□□ -0.67
LTBR-208ENST00000541005 SPSB1Q96BD6 273 aa10.84□□□□□ -0.67
LTBR-208ENST00000541005 SLC6A7Q99884 636 aa10.84□□□□□ -0.67
LTBR-208ENST00000541005 SUCNR1Q9BXA5 334 aa10.84□□□□□ -0.67
LTBR-208ENST00000541005 RASSF4Q9H2L5 321 aa10.84□□□□□ -0.67
LTBR-208ENST00000541005 OCEL1Q9H607 264 aa10.84□□□□□ -0.67
LTBR-208ENST00000541005 PLCXD1Q9NUJ7 323 aa10.84□□□□□ -0.67
LTBR-208ENST00000541005 CNOT2Q9NZN8 540 aaKnown RBP10.84□□□□□ -0.67
LTBR-208ENST00000541005 FAM230AA0A1W2PPH8 454 aa10.83□□□□□ -0.68
LTBR-208ENST00000541005 EFCAB10A6NFE3 127 aa10.83□□□□□ -0.68
LTBR-208ENST00000541005 ALX3O95076 343 aa10.83□□□□□ -0.68
LTBR-208ENST00000541005 IGHV4-38-2P0DP08 117 aa10.83□□□□□ -0.68
LTBR-208ENST00000541005 SELLP14151 372 aa10.83□□□□□ -0.68
LTBR-208ENST00000541005 ZNF20P17024 532 aa10.83□□□□□ -0.68
LTBR-208ENST00000541005 ATF1P18846 271 aa10.83□□□□□ -0.68
LTBR-208ENST00000541005 PRKACBP22694 351 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms