RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 LGALS8O00214 317 aa14.75□□□□□ -0.05
CLSTN3-210ENST00000540931 LY6HO94772 140 aa14.75□□□□□ -0.05
CLSTN3-210ENST00000540931 LHBP01229 141 aa14.75□□□□□ -0.05
CLSTN3-210ENST00000540931 UCHL1P09936 223 aa14.75□□□□□ -0.05
CLSTN3-210ENST00000540931 IGFBP3P17936 291 aaPredicted RBP14.75□□□□□ -0.05
CLSTN3-210ENST00000540931 SRMP19623 302 aa14.75□□□□□ -0.05
CLSTN3-210ENST00000540931 FGF9P31371 208 aaPredicted RBP14.75□□□□□ -0.05
CLSTN3-210ENST00000540931 KISS1Q15726 138 aa14.75□□□□□ -0.05
CLSTN3-210ENST00000540931 MPPED2Q15777 294 aa14.75□□□□□ -0.05
CLSTN3-210ENST00000540931 C11orf91Q3C1V1 193 aa14.75□□□□□ -0.05
CLSTN3-210ENST00000540931 GLT8D1Q68CQ7 371 aa14.75□□□□□ -0.05
CLSTN3-210ENST00000540931 LRRC28Q86X40 367 aaPredicted RBP14.75□□□□□ -0.05
CLSTN3-210ENST00000540931 DVL3Q92997 716 aaPredicted RBP14.75□□□□□ -0.05
CLSTN3-210ENST00000540931 GPER1Q99527 375 aa14.75□□□□□ -0.05
CLSTN3-210ENST00000540931 REG4Q9BYZ8 158 aa14.75□□□□□ -0.05
CLSTN3-210ENST00000540931 BPESC1Q9GZL8 116 aa14.75□□□□□ -0.05
CLSTN3-210ENST00000540931 SNTG1Q9NSN8 517 aa14.75□□□□□ -0.05
CLSTN3-210ENST00000540931 PCDHB10Q9UN67 800 aa14.75□□□□□ -0.05
CLSTN3-210ENST00000540931 STUB1Q9UNE7 303 aa14.75□□□□□ -0.05
CLSTN3-210ENST00000540931 SF3B6Q9Y3B4 125 aaKnown RBP14.75□□□□□ -0.05
CLSTN3-210ENST00000540931 WIPI2Q9Y4P8 454 aa14.75□□□□□ -0.05
CLSTN3-210ENST00000540931 DYSFO75923 2080 aa14.75□□□□□ -0.05
CLSTN3-210ENST00000540931 IGKV1-9A0A0C4DH69 117 aa14.74□□□□□ -0.05
CLSTN3-210ENST00000540931 PDCD5O14737 125 aa14.74□□□□□ -0.05
CLSTN3-210ENST00000540931 LMX1BO60663 402 aa14.74□□□□□ -0.05
CLSTN3-210ENST00000540931 ZNF780AO75290 641 aaPredicted RBP14.74□□□□□ -0.05
CLSTN3-210ENST00000540931 ZNF93P35789 620 aaPredicted RBP14.74□□□□□ -0.05
CLSTN3-210ENST00000540931 CAPZA1P52907 286 aa14.74□□□□□ -0.05
CLSTN3-210ENST00000540931 GPR176Q14439 515 aa14.74□□□□□ -0.05
CLSTN3-210ENST00000540931 SMIM21Q3B7S5 101 aa14.74□□□□□ -0.05
CLSTN3-210ENST00000540931 TEX36Q5VZQ5 186 aa14.74□□□□□ -0.05
CLSTN3-210ENST00000540931 NLRC3Q7RTR2 1065 aa14.74□□□□□ -0.05
CLSTN3-210ENST00000540931 C11orf53Q8IXP5 236 aa14.74□□□□□ -0.05
CLSTN3-210ENST00000540931 PXT1Q8NFP0 134 aa14.74□□□□□ -0.05
CLSTN3-210ENST00000540931 ZNF420Q8TAQ5 688 aaPredicted RBP14.74□□□□□ -0.05
CLSTN3-210ENST00000540931 TRMT10AQ8TBZ6 339 aaKnown RBP14.74□□□□□ -0.05
CLSTN3-210ENST00000540931 LRRC29Q8WV35 223 aa14.74□□□□□ -0.05
CLSTN3-210ENST00000540931 UQCC2Q9BRT2 126 aa14.74□□□□□ -0.05
CLSTN3-210ENST00000540931 NOX4Q9NPH5 578 aa14.74□□□□□ -0.05
CLSTN3-210ENST00000540931 TAS2R4Q9NYW5 299 aa14.74□□□□□ -0.05
CLSTN3-210ENST00000540931 GHRLQ9UBU3 117 aa14.74□□□□□ -0.05
CLSTN3-210ENST00000540931 MIOXQ9UGB7 285 aa14.74□□□□□ -0.05
CLSTN3-210ENST00000540931 GLS2Q9UI32 602 aa14.74□□□□□ -0.05
CLSTN3-210ENST00000540931 IGHV4-30-2A0A087WSY4 118 aa14.73□□□□□ -0.05
CLSTN3-210ENST00000540931 OOEPA6NGQ2 149 aa14.73□□□□□ -0.05
CLSTN3-210ENST00000540931 LYNX1G3V0Z9 82 aa14.73□□□□□ -0.05
CLSTN3-210ENST00000540931 TRAPPC2LH3BP13 241 aa14.73□□□□□ -0.05
CLSTN3-210ENST00000540931 H3BUI4 141 aa14.73□□□□□ -0.05
CLSTN3-210ENST00000540931 GABRPO00591 440 aa14.73□□□□□ -0.05
CLSTN3-210ENST00000540931 INMTO95050 263 aa14.73□□□□□ -0.05
CLSTN3-210ENST00000540931 IGHV2-70P01814 119 aa14.73□□□□□ -0.05
CLSTN3-210ENST00000540931 LYNX1P0DP58 116 aa14.73□□□□□ -0.05
CLSTN3-210ENST00000540931 GLRA1P23415 457 aa14.73□□□□□ -0.05
CLSTN3-210ENST00000540931 MYL9P24844 172 aa14.73□□□□□ -0.05
CLSTN3-210ENST00000540931 PDZK1IP1Q13113 114 aa14.73□□□□□ -0.05
CLSTN3-210ENST00000540931 SSX1Q16384 188 aa14.73□□□□□ -0.05
CLSTN3-210ENST00000540931 DCDC5Q6ZRR9 648 aa14.73□□□□□ -0.05
CLSTN3-210ENST00000540931 WDR86Q86TI4 376 aa14.73□□□□□ -0.05
CLSTN3-210ENST00000540931 KRTAP1-3Q8IUG1 177 aa14.73□□□□□ -0.05
CLSTN3-210ENST00000540931 POC1AQ8NBT0 407 aa14.73□□□□□ -0.05
CLSTN3-210ENST00000540931 WFDC11Q8NEX6 87 aa14.73□□□□□ -0.05
CLSTN3-210ENST00000540931 RPL3LQ92901 407 aaKnown RBP14.73□□□□□ -0.05
CLSTN3-210ENST00000540931 TMEM203Q969S6 136 aa14.73□□□□□ -0.05
CLSTN3-210ENST00000540931 TMIGD2Q96BF3 282 aa14.73□□□□□ -0.05
CLSTN3-210ENST00000540931 GAL3ST1Q99999 423 aa14.73□□□□□ -0.05
CLSTN3-210ENST00000540931 METTL17Q9H7H0 456 aaPredicted RBP14.73□□□□□ -0.05
CLSTN3-210ENST00000540931 SEBOXQ9HB31 216 aaPredicted RBP14.73□□□□□ -0.05
CLSTN3-210ENST00000540931 DNAJB11Q9UBS4 358 aa14.73□□□□□ -0.05
CLSTN3-210ENST00000540931 DNHD1Q96M86 4753 aa14.72□□□□□ -0.05
CLSTN3-210ENST00000540931 TRAV1-2A0A0B4J238 106 aa14.72□□□□□ -0.05
CLSTN3-210ENST00000540931 ISPDA4D126 451 aa14.72□□□□□ -0.05
CLSTN3-210ENST00000540931 PGA5P0DJD9 388 aa14.72□□□□□ -0.05
CLSTN3-210ENST00000540931 PMELP40967 661 aa14.72□□□□□ -0.05
CLSTN3-210ENST00000540931 NPY4RP50391 375 aa14.72□□□□□ -0.05
CLSTN3-210ENST00000540931 RPS25P62851 125 aaKnown RBP14.72□□□□□ -0.05
CLSTN3-210ENST00000540931 DDI2Q5TDH0 399 aa14.72□□□□□ -0.05
CLSTN3-210ENST00000540931 GCSAMQ8N6F7 178 aa14.72□□□□□ -0.05
CLSTN3-210ENST00000540931 OR13C5Q8NGS8 318 aa14.72□□□□□ -0.05
CLSTN3-210ENST00000540931 OR51F2Q8NH61 342 aa14.72□□□□□ -0.05
CLSTN3-210ENST00000540931 NPRL2Q8WTW4 380 aa14.72□□□□□ -0.05
CLSTN3-210ENST00000540931 CEP19Q96LK0 163 aa14.72□□□□□ -0.05
CLSTN3-210ENST00000540931 SCOCQ9UIL1 159 aa14.72□□□□□ -0.05
CLSTN3-210ENST00000540931 GPR37O15354 613 aa14.71□□□□□ -0.05
CLSTN3-210ENST00000540931 TMEM127O75204 238 aa14.71□□□□□ -0.05
CLSTN3-210ENST00000540931 NXPH2O95156 264 aa14.71□□□□□ -0.05
CLSTN3-210ENST00000540931 CYB5R3P00387 301 aaPredicted RBP14.71□□□□□ -0.05
CLSTN3-210ENST00000540931 UBBP0CG47 229 aa14.71□□□□□ -0.05
CLSTN3-210ENST00000540931 TMEM225BP0DP42 221 aa14.71□□□□□ -0.05
CLSTN3-210ENST00000540931 CD36P16671 472 aa14.71□□□□□ -0.05
CLSTN3-210ENST00000540931 ZNF404Q494X3 552 aa14.71□□□□□ -0.05
CLSTN3-210ENST00000540931 SPRNQ5BIV9 151 aa14.71□□□□□ -0.05
CLSTN3-210ENST00000540931 TMEM91Q6ZNR0 172 aa14.71□□□□□ -0.05
CLSTN3-210ENST00000540931 SLC25A26Q70HW3 274 aa14.71□□□□□ -0.05
CLSTN3-210ENST00000540931 SLC36A1Q7Z2H8 476 aa14.71□□□□□ -0.05
CLSTN3-210ENST00000540931 SATL1Q86VE3 508 aa14.71□□□□□ -0.05
CLSTN3-210ENST00000540931 TPRA1Q86W33 373 aa14.71□□□□□ -0.05
CLSTN3-210ENST00000540931 MED30Q96HR3 178 aa14.71□□□□□ -0.05
CLSTN3-210ENST00000540931 NRIP2Q9BQI9 281 aa14.71□□□□□ -0.05
CLSTN3-210ENST00000540931 PPP1R3EQ9H7J1 279 aa14.71□□□□□ -0.05
CLSTN3-210ENST00000540931 CACNG2Q9Y698 323 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms