RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 ZNF808Q8N4W9 903 aaPredicted RBP10.72□□□□□ -0.69
SMAD3-204ENST00000540846 FAM169BQ8N8A8 192 aa10.72□□□□□ -0.69
SMAD3-204ENST00000540846 TMEM229BQ8NBD8 167 aa10.72□□□□□ -0.69
SMAD3-204ENST00000540846 OR56B1Q8NGI3 324 aa10.72□□□□□ -0.69
SMAD3-204ENST00000540846 OR4C16Q8NGL9 310 aa10.72□□□□□ -0.69
SMAD3-204ENST00000540846 CA5BP1Q8WTZ4 195 aa10.72□□□□□ -0.69
SMAD3-204ENST00000540846 ST6GAL2Q96JF0 529 aa10.72□□□□□ -0.69
SMAD3-204ENST00000540846 URM1Q9BTM9 101 aaKnown RBP10.72□□□□□ -0.69
SMAD3-204ENST00000540846 BANF2Q9H503 90 aa10.72□□□□□ -0.69
SMAD3-204ENST00000540846 ZMAT3Q9HA38 289 aaKnown RBP10.72□□□□□ -0.69
SMAD3-204ENST00000540846 NPDC1Q9NQX5 325 aaPredicted RBP10.72□□□□□ -0.69
SMAD3-204ENST00000540846 MEIS3P1A6NDR6 274 aa10.71□□□□□ -0.69
SMAD3-204ENST00000540846 FOXI3A8MTJ6 420 aaPredicted RBP10.71□□□□□ -0.69
SMAD3-204ENST00000540846 J3QW42 95 aa10.71□□□□□ -0.69
SMAD3-204ENST00000540846 ICMTO60725 284 aa10.71□□□□□ -0.69
SMAD3-204ENST00000540846 AGFG2O95081 481 aa10.71□□□□□ -0.69
SMAD3-204ENST00000540846 CBR1P16152 277 aa10.71□□□□□ -0.69
SMAD3-204ENST00000540846 MGMTP16455 207 aa10.71□□□□□ -0.69
SMAD3-204ENST00000540846 RCVRNP35243 200 aa10.71□□□□□ -0.69
SMAD3-204ENST00000540846 WNT5AP41221 380 aa10.71□□□□□ -0.69
SMAD3-204ENST00000540846 EIF2B2P49770 351 aaKnown RBP10.71□□□□□ -0.69
SMAD3-204ENST00000540846 RBP2P50120 134 aa10.71□□□□□ -0.69
SMAD3-204ENST00000540846 MTCP1P56278 107 aa10.71□□□□□ -0.69
SMAD3-204ENST00000540846 RAB25P57735 213 aa10.71□□□□□ -0.69
SMAD3-204ENST00000540846 TAS2R19P59542 299 aa10.71□□□□□ -0.69
SMAD3-204ENST00000540846 UBE2NP61088 152 aaKnown RBP10.71□□□□□ -0.69
SMAD3-204ENST00000540846 RRAS2P62070 204 aaPredicted RBP10.71□□□□□ -0.69
SMAD3-204ENST00000540846 CDNFQ49AH0 187 aa10.71□□□□□ -0.69
SMAD3-204ENST00000540846 SFRP4Q6FHJ7 346 aaPredicted RBP10.71□□□□□ -0.69
SMAD3-204ENST00000540846 FAAP20Q6NZ36 180 aa10.71□□□□□ -0.69
SMAD3-204ENST00000540846 ASCL4Q6XD76 172 aa10.71□□□□□ -0.69
SMAD3-204ENST00000540846 MRPL21Q7Z2W9 205 aaKnown RBP10.71□□□□□ -0.69
SMAD3-204ENST00000540846 CHST4Q8NCG5 386 aa10.71□□□□□ -0.69
SMAD3-204ENST00000540846 SLC30A7Q8NEW0 376 aa10.71□□□□□ -0.69
SMAD3-204ENST00000540846 OR56B2PQ8NGI1 322 aa10.71□□□□□ -0.69
SMAD3-204ENST00000540846 BORCS8Q96FH0 119 aa10.71□□□□□ -0.69
SMAD3-204ENST00000540846 S100A13Q99584 98 aa10.71□□□□□ -0.69
SMAD3-204ENST00000540846 TM2D1Q9BX74 207 aa10.71□□□□□ -0.69
SMAD3-204ENST00000540846 GHITMQ9H3K2 345 aa10.71□□□□□ -0.69
SMAD3-204ENST00000540846 MCUBQ9NWR8 336 aa10.71□□□□□ -0.69
SMAD3-204ENST00000540846 ZNF221Q9UK13 617 aa10.71□□□□□ -0.69
SMAD3-204ENST00000540846 ELF5Q9UKW6 265 aaPredicted RBP10.71□□□□□ -0.69
SMAD3-204ENST00000540846 SLC7A11Q9UPY5 501 aa10.71□□□□□ -0.69
SMAD3-204ENST00000540846 STARD10Q9Y365 291 aa10.71□□□□□ -0.69
SMAD3-204ENST00000540846 LRRK2Q5S007 2527 aa10.71□□□□□ -0.69
SMAD3-204ENST00000540846 CADP27708 2225 aa10.71□□□□□ -0.7
SMAD3-204ENST00000540846 A0A0A6YYJ9 748 aa10.7□□□□□ -0.7
SMAD3-204ENST00000540846 FAM230AA0A1W2PPH8 454 aa10.7□□□□□ -0.7
SMAD3-204ENST00000540846 CLEC18AA5D8T8 446 aa10.7□□□□□ -0.7
SMAD3-204ENST00000540846 MFNGO00587 321 aa10.7□□□□□ -0.7
SMAD3-204ENST00000540846 PEX14O75381 377 aa10.7□□□□□ -0.7
SMAD3-204ENST00000540846 NDUFB6O95139 128 aa10.7□□□□□ -0.7
SMAD3-204ENST00000540846 CLDN14O95500 239 aa10.7□□□□□ -0.7
SMAD3-204ENST00000540846 CYB5AP00167 134 aa10.7□□□□□ -0.7
SMAD3-204ENST00000540846 CST4P01036 141 aa10.7□□□□□ -0.7
SMAD3-204ENST00000540846 CD74P04233 296 aa10.7□□□□□ -0.7
SMAD3-204ENST00000540846 CD3DP04234 171 aa10.7□□□□□ -0.7
SMAD3-204ENST00000540846 HIST1H1DP16402 221 aaKnown RBP10.7□□□□□ -0.7
SMAD3-204ENST00000540846 FUT6P51993 359 aa10.7□□□□□ -0.7
SMAD3-204ENST00000540846 SORDQ00796 357 aa10.7□□□□□ -0.7
SMAD3-204ENST00000540846 TBC1D28Q2M2D7 210 aa10.7□□□□□ -0.7
SMAD3-204ENST00000540846 PLAC9Q5JTB6 97 aa10.7□□□□□ -0.7
SMAD3-204ENST00000540846 ATAD3CQ5T2N8 411 aa10.7□□□□□ -0.7
SMAD3-204ENST00000540846 PLCXD3Q63HM9 321 aa10.7□□□□□ -0.7
SMAD3-204ENST00000540846 STEAP1BQ6NZ63 245 aa10.7□□□□□ -0.7
SMAD3-204ENST00000540846 CLEC18BQ6UXF7 455 aa10.7□□□□□ -0.7
SMAD3-204ENST00000540846 RFPL4BQ6ZWI9 263 aa10.7□□□□□ -0.7
SMAD3-204ENST00000540846 CLEC18CQ8NCF0 446 aa10.7□□□□□ -0.7
SMAD3-204ENST00000540846 CSNK2A3Q8NEV1 391 aa10.7□□□□□ -0.7
SMAD3-204ENST00000540846 RAB3CQ96E17 227 aa10.7□□□□□ -0.7
SMAD3-204ENST00000540846 USB1Q9BQ65 265 aaKnown RBP10.7□□□□□ -0.7
SMAD3-204ENST00000540846 SELENOIQ9C0D9 397 aa10.7□□□□□ -0.7
SMAD3-204ENST00000540846 KCNJ16Q9NPI9 418 aa10.7□□□□□ -0.7
SMAD3-204ENST00000540846 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.7□□□□□ -0.77e-8■■■■□ 19.9
SMAD3-204ENST00000540846 PTTG3PQ9NZH4 202 aa10.7□□□□□ -0.7
SMAD3-204ENST00000540846 ING4Q9UNL4 249 aa10.7□□□□□ -0.7
SMAD3-204ENST00000540846 COL12A1Q99715 3063 aa10.7□□□□□ -0.7
SMAD3-204ENST00000540846 HEATR1Q9H583 2144 aaKnown RBP10.7□□□□□ -0.7
SMAD3-204ENST00000540846 IGHV1-18A0A0C4DH31 117 aa10.69□□□□□ -0.7
SMAD3-204ENST00000540846 SOCS1O15524 211 aa10.69□□□□□ -0.7
SMAD3-204ENST00000540846 PRAF2O60831 178 aa10.69□□□□□ -0.7
SMAD3-204ENST00000540846 NGFP01138 241 aa10.69□□□□□ -0.7
SMAD3-204ENST00000540846 TMEM225BP0DP42 221 aa10.69□□□□□ -0.7
SMAD3-204ENST00000540846 PLA2G2AP14555 144 aa10.69□□□□□ -0.7
SMAD3-204ENST00000540846 GNB3P16520 340 aa10.69□□□□□ -0.7
SMAD3-204ENST00000540846 CPT2P23786 658 aa10.69□□□□□ -0.7
SMAD3-204ENST00000540846 HOXC12P31275 282 aa10.69□□□□□ -0.7
SMAD3-204ENST00000540846 IDH3GP51553 393 aaPredicted RBP10.69□□□□□ -0.7
SMAD3-204ENST00000540846 MECP2P51608 486 aaKnown RBP10.69□□□□□ -0.7
SMAD3-204ENST00000540846 ATP1B3P54709 279 aa10.69□□□□□ -0.7
SMAD3-204ENST00000540846 PPA1Q15181 289 aa10.69□□□□□ -0.7
SMAD3-204ENST00000540846 RBMS2Q15434 407 aaKnown RBP10.69□□□□□ -0.7
SMAD3-204ENST00000540846 PNLIPRP3Q17RR3 467 aa10.69□□□□□ -0.7
SMAD3-204ENST00000540846 C3orf36Q3SXR2 165 aa10.69□□□□□ -0.7
SMAD3-204ENST00000540846 TRAPPC6BQ86SZ2 158 aa10.69□□□□□ -0.7
SMAD3-204ENST00000540846 RTN4RL2Q86UN3 420 aa10.69□□□□□ -0.7
SMAD3-204ENST00000540846 PXT1Q8NFP0 134 aa10.69□□□□□ -0.7
SMAD3-204ENST00000540846 OR4D10Q8NGI6 311 aa10.69□□□□□ -0.7
SMAD3-204ENST00000540846 NUDCD2Q8WVJ2 157 aa10.69□□□□□ -0.7
SMAD3-204ENST00000540846 Q96M66 194 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms