RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 ZNF529Q6P280 563 aa12.99□□□□□ -0.33
DDB1-218ENST00000540784 SATL1Q86VE3 508 aa12.99□□□□□ -0.33
DDB1-218ENST00000540784 MKXQ8IYA7 352 aa12.99□□□□□ -0.33
DDB1-218ENST00000540784 RAB39BQ96DA2 213 aa12.99□□□□□ -0.33
DDB1-218ENST00000540784 DERL3Q96Q80 235 aa12.99□□□□□ -0.33
DDB1-218ENST00000540784 TMEM246Q9BRR3 403 aa12.99□□□□□ -0.33
DDB1-218ENST00000540784 ZNF665Q9H7R5 613 aa12.99□□□□□ -0.33
DDB1-218ENST00000540784 TMEM138Q9NPI0 162 aa12.99□□□□□ -0.33
DDB1-218ENST00000540784 RASL12Q9NYN1 266 aa12.99□□□□□ -0.33
DDB1-218ENST00000540784 IGHV3OR15-7A0A075B7D8 119 aa12.98□□□□□ -0.33
DDB1-218ENST00000540784 SRRM5B3KS81 715 aa12.98□□□□□ -0.33
DDB1-218ENST00000540784 NDUFA2O43678 99 aa12.98□□□□□ -0.33
DDB1-218ENST00000540784 NOS1APO75052 506 aaPredicted RBP12.98□□□□□ -0.33
DDB1-218ENST00000540784 INMTO95050 263 aa12.98□□□□□ -0.33
DDB1-218ENST00000540784 CYB5AP00167 134 aa12.98□□□□□ -0.33
DDB1-218ENST00000540784 PLATP00750 562 aa12.98□□□□□ -0.33
DDB1-218ENST00000540784 MUC1P15941 1255 aaPredicted RBP12.98□□□□□ -0.33
DDB1-218ENST00000540784 GLRA1P23415 457 aa12.98□□□□□ -0.33
DDB1-218ENST00000540784 CPT2P23786 658 aa12.98□□□□□ -0.33
DDB1-218ENST00000540784 MPZP25189 248 aa12.98□□□□□ -0.33
DDB1-218ENST00000540784 PSMA1P25786 263 aaKnown RBP12.98□□□□□ -0.33
DDB1-218ENST00000540784 PSMB9P28065 219 aa12.98□□□□□ -0.33
DDB1-218ENST00000540784 BDKRB2P30411 391 aa12.98□□□□□ -0.33
DDB1-218ENST00000540784 IL2RGP31785 369 aa12.98□□□□□ -0.33
DDB1-218ENST00000540784 GZMKP49863 264 aa12.98□□□□□ -0.33
DDB1-218ENST00000540784 PDZK1IP1Q13113 114 aa12.98□□□□□ -0.33
DDB1-218ENST00000540784 KISS1Q15726 138 aa12.98□□□□□ -0.33
DDB1-218ENST00000540784 TEX36Q5VZQ5 186 aa12.98□□□□□ -0.33
DDB1-218ENST00000540784 CYB5R2Q6BCY4 276 aa12.98□□□□□ -0.33
DDB1-218ENST00000540784 ASPHD2Q6ICH7 369 aa12.98□□□□□ -0.33
DDB1-218ENST00000540784 SLC25A26Q70HW3 274 aa12.98□□□□□ -0.33
DDB1-218ENST00000540784 BIVMQ86UB2 503 aa12.98□□□□□ -0.33
DDB1-218ENST00000540784 POC1AQ8NBT0 407 aa12.98□□□□□ -0.33
DDB1-218ENST00000540784 TMIGD2Q96BF3 282 aa12.98□□□□□ -0.33
DDB1-218ENST00000540784 ORAI1Q96D31 301 aa12.98□□□□□ -0.33
DDB1-218ENST00000540784 CPNE2Q96FN4 548 aaPredicted RBP12.98□□□□□ -0.33
DDB1-218ENST00000540784 SPACA5Q96QH8 159 aa12.98□□□□□ -0.33
DDB1-218ENST00000540784 NR1H4Q96RI1 486 aaPredicted RBP12.98□□□□□ -0.33
DDB1-218ENST00000540784 PATZ1Q9HBE1 687 aaKnown RBP12.98□□□□□ -0.33
DDB1-218ENST00000540784 NOX4Q9NPH5 578 aa12.98□□□□□ -0.33
DDB1-218ENST00000540784 DNAJB11Q9UBS4 358 aa12.98□□□□□ -0.33
DDB1-218ENST00000540784 MIOXQ9UGB7 285 aa12.98□□□□□ -0.33
DDB1-218ENST00000540784 FOXJ3Q9UPW0 622 aa12.98□□□□□ -0.33
DDB1-218ENST00000540784 SF3B6Q9Y3B4 125 aaKnown RBP12.98□□□□□ -0.33
DDB1-218ENST00000540784 PIN1P1O15428 100 aa12.97□□□□□ -0.33
DDB1-218ENST00000540784 IGHV2-5P01817 119 aa12.97□□□□□ -0.33
DDB1-218ENST00000540784 GYPAP02724 150 aa12.97□□□□□ -0.33
DDB1-218ENST00000540784 WNT2P09544 360 aa12.97□□□□□ -0.33
DDB1-218ENST00000540784 PGA5P0DJD9 388 aa12.97□□□□□ -0.33
DDB1-218ENST00000540784 IGFBP3P17936 291 aaPredicted RBP12.97□□□□□ -0.33
DDB1-218ENST00000540784 GABRA5P31644 462 aa12.97□□□□□ -0.33
DDB1-218ENST00000540784 POU3F4P49335 361 aa12.97□□□□□ -0.33
DDB1-218ENST00000540784 RPS25P62851 125 aaKnown RBP12.97□□□□□ -0.33
DDB1-218ENST00000540784 INSL4Q14641 139 aa12.97□□□□□ -0.33
DDB1-218ENST00000540784 DCDC5Q6ZRR9 648 aa12.97□□□□□ -0.33
DDB1-218ENST00000540784 OR52N4Q8NGI2 321 aa12.97□□□□□ -0.33
DDB1-218ENST00000540784 OR51A2Q8NGJ7 313 aa12.97□□□□□ -0.33
DDB1-218ENST00000540784 RFT1Q96AA3 541 aa12.97□□□□□ -0.33
DDB1-218ENST00000540784 C12orf43Q96C57 262 aaKnown RBP12.97□□□□□ -0.33
DDB1-218ENST00000540784 SEH1LQ96EE3 360 aa12.97□□□□□ -0.33
DDB1-218ENST00000540784 ZNF488Q96MN9 340 aa12.97□□□□□ -0.33
DDB1-218ENST00000540784 GPER1Q99527 375 aa12.97□□□□□ -0.33
DDB1-218ENST00000540784 WDR13Q9H1Z4 485 aa12.97□□□□□ -0.33
DDB1-218ENST00000540784 ZNF696Q9H7X3 374 aa12.97□□□□□ -0.33
DDB1-218ENST00000540784 TANC2Q9HCD6 1990 aa12.96□□□□□ -0.33
DDB1-218ENST00000540784 TRAV8-7A0A075B6U6 113 aa12.96□□□□□ -0.33
DDB1-218ENST00000540784 CEACAM18A8MTB9 384 aa12.96□□□□□ -0.33
DDB1-218ENST00000540784 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.96□□□□□ -0.33
DDB1-218ENST00000540784 CCRL2O00421 344 aa12.96□□□□□ -0.33
DDB1-218ENST00000540784 TNFRSF13BO14836 293 aaPredicted RBP12.96□□□□□ -0.33
DDB1-218ENST00000540784 RGS9O75916 674 aaPredicted RBP12.96□□□□□ -0.33
DDB1-218ENST00000540784 NXPH2O95156 264 aa12.96□□□□□ -0.33
DDB1-218ENST00000540784 LY6G6DO95868 133 aa12.96□□□□□ -0.33
DDB1-218ENST00000540784 IGHV4-31P0DP07 118 aa12.96□□□□□ -0.33
DDB1-218ENST00000540784 TMEM225BP0DP42 221 aa12.96□□□□□ -0.33
DDB1-218ENST00000540784 NEDD8Q15843 81 aa12.96□□□□□ -0.33
DDB1-218ENST00000540784 SSX1Q16384 188 aa12.96□□□□□ -0.33
DDB1-218ENST00000540784 LYPD2Q6UXB3 125 aa12.96□□□□□ -0.33
DDB1-218ENST00000540784 TMEM91Q6ZNR0 172 aa12.96□□□□□ -0.33
DDB1-218ENST00000540784 RNF144BQ7Z419 303 aa12.96□□□□□ -0.33
DDB1-218ENST00000540784 FAM90A1Q86YD7 464 aa12.96□□□□□ -0.33
DDB1-218ENST00000540784 LINC01356Q8N9X3 169 aa12.96□□□□□ -0.33
DDB1-218ENST00000540784 OR5T2Q8NGG2 359 aa12.96□□□□□ -0.33
DDB1-218ENST00000540784 OR51F2Q8NH61 342 aa12.96□□□□□ -0.33
DDB1-218ENST00000540784 PHYHIPQ92561 330 aa12.96□□□□□ -0.33
DDB1-218ENST00000540784 SLAMF9Q96A28 289 aa12.96□□□□□ -0.33
DDB1-218ENST00000540784 C1orf159Q96HA4 380 aa12.96□□□□□ -0.33
DDB1-218ENST00000540784 CEP19Q96LK0 163 aa12.96□□□□□ -0.33
DDB1-218ENST00000540784 SMR3AQ99954 134 aa12.96□□□□□ -0.33
DDB1-218ENST00000540784 NRIP2Q9BQI9 281 aa12.96□□□□□ -0.33
DDB1-218ENST00000540784 TCF7L1Q9HCS4 588 aa12.96□□□□□ -0.33
DDB1-218ENST00000540784 VCX3AQ9NNX9 186 aa12.96□□□□□ -0.33
DDB1-218ENST00000540784 SNTG1Q9NSN8 517 aa12.96□□□□□ -0.33
DDB1-218ENST00000540784 MTCH1Q9NZJ7 389 aa12.96□□□□□ -0.33
DDB1-218ENST00000540784 MEGF11A6BM72 1044 aa12.95□□□□□ -0.34
DDB1-218ENST00000540784 B4DSR2 109 aa12.95□□□□□ -0.34
DDB1-218ENST00000540784 TRAPPC2LH3BP13 241 aa12.95□□□□□ -0.34
DDB1-218ENST00000540784 ADAM20O43506 726 aa12.95□□□□□ -0.34
DDB1-218ENST00000540784 SPRY1O43609 319 aaPredicted RBP12.95□□□□□ -0.34
DDB1-218ENST00000540784 SC5DO75845 299 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 158.7 ms