RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 LSM5Q9Y4Y9 91 aaKnown RBP12.25□□□□□ -0.45
UBE3B-210ENST00000539599 ZNF587BE7ETH6 402 aa12.24□□□□□ -0.45
UBE3B-210ENST00000539599 LRP3O75074 770 aa12.24□□□□□ -0.45
UBE3B-210ENST00000539599 SCGNO76038 276 aa12.24□□□□□ -0.45
UBE3B-210ENST00000539599 FGF5P12034 268 aa12.24□□□□□ -0.45
UBE3B-210ENST00000539599 TBPP20226 339 aa12.24□□□□□ -0.45
UBE3B-210ENST00000539599 ADH6P28332 368 aa12.24□□□□□ -0.45
UBE3B-210ENST00000539599 DSCR4P56555 118 aaPredicted RBP12.24□□□□□ -0.45
UBE3B-210ENST00000539599 TAS2R31P59538 309 aa12.24□□□□□ -0.45
UBE3B-210ENST00000539599 RBM39Q14498 530 aaKnown RBP12.24□□□□□ -0.45
UBE3B-210ENST00000539599 IAH1Q2TAA2 248 aaPredicted RBP12.24□□□□□ -0.45
UBE3B-210ENST00000539599 MST1LQ2TV78 715 aa12.24□□□□□ -0.45
UBE3B-210ENST00000539599 PHLDA2Q53GA4 152 aa12.24□□□□□ -0.45
UBE3B-210ENST00000539599 AKIRIN2Q53H80 203 aa12.24□□□□□ -0.45
UBE3B-210ENST00000539599 C10orf128Q5T292 105 aa12.24□□□□□ -0.45
UBE3B-210ENST00000539599 POC1AQ8NBT0 407 aa12.24□□□□□ -0.45
UBE3B-210ENST00000539599 SGCEO43556 437 aa12.24□□□□□ -0.45
UBE3B-210ENST00000539599 SNAPC5O75971 98 aa12.24□□□□□ -0.45
UBE3B-210ENST00000539599 FAM157CP0CG43 387 aa12.24□□□□□ -0.45
UBE3B-210ENST00000539599 TPT1P13693 172 aaKnown RBP12.24□□□□□ -0.45
UBE3B-210ENST00000539599 THBS4P35443 961 aa12.24□□□□□ -0.45
UBE3B-210ENST00000539599 RPUSD3Q6P087 351 aaKnown RBP12.24□□□□□ -0.45
UBE3B-210ENST00000539599 OPN5Q6U736 354 aa12.24□□□□□ -0.45
UBE3B-210ENST00000539599 Q6ZPA2 131 aa12.24□□□□□ -0.45
UBE3B-210ENST00000539599 LDLRAD3Q86YD5 345 aa12.24□□□□□ -0.45
UBE3B-210ENST00000539599 TMEM105Q8N8V8 129 aa12.24□□□□□ -0.45
UBE3B-210ENST00000539599 OR11L1Q8NGX0 322 aa12.24□□□□□ -0.45
UBE3B-210ENST00000539599 TREM1Q9NP99 234 aa12.24□□□□□ -0.45
UBE3B-210ENST00000539599 DEPPQ9NTK1 212 aa12.24□□□□□ -0.45
UBE3B-210ENST00000539599 CRIM1Q9NZV1 1036 aa12.24□□□□□ -0.45
UBE3B-210ENST00000539599 PCDHGA1Q9Y5H4 931 aa12.24□□□□□ -0.45
UBE3B-210ENST00000539599 KIAA1549Q9HCM3 1950 aa12.24□□□□□ -0.45
UBE3B-210ENST00000539599 LOC102723996A0A087X1L8 192 aa12.24□□□□□ -0.45
UBE3B-210ENST00000539599 TMEM218A2RU14 115 aa12.24□□□□□ -0.45
UBE3B-210ENST00000539599 F8VVB4 439 aa12.24□□□□□ -0.45
UBE3B-210ENST00000539599 F8VWA3 439 aa12.24□□□□□ -0.45
UBE3B-210ENST00000539599 XRCC2O43543 280 aa12.24□□□□□ -0.45
UBE3B-210ENST00000539599 FARS2O95363 451 aaKnown RBP12.24□□□□□ -0.45
UBE3B-210ENST00000539599 NFYBP25208 207 aa12.24□□□□□ -0.45
UBE3B-210ENST00000539599 ASCL1P50553 236 aa12.24□□□□□ -0.45
UBE3B-210ENST00000539599 CLDN15P56746 228 aa12.24□□□□□ -0.45
UBE3B-210ENST00000539599 IGFBP7Q16270 282 aa12.24□□□□□ -0.45
UBE3B-210ENST00000539599 PNLIPRP3Q17RR3 467 aa12.24□□□□□ -0.45
UBE3B-210ENST00000539599 AGBL5Q8NDL9 886 aa12.24□□□□□ -0.45
UBE3B-210ENST00000539599 EMG1Q92979 244 aaKnown RBP12.24□□□□□ -0.45
UBE3B-210ENST00000539599 R4GN57 208 aa12.24□□□□□ -0.45
UBE3B-210ENST00000539599 PCSK5Q92824 1860 aa12.23□□□□□ -0.45
UBE3B-210ENST00000539599 ATG12O94817 140 aa12.23□□□□□ -0.45
UBE3B-210ENST00000539599 DIRAS3O95661 229 aa12.23□□□□□ -0.45
UBE3B-210ENST00000539599 HTR5AP47898 357 aa12.23□□□□□ -0.45
UBE3B-210ENST00000539599 SRYQ05066 204 aa12.23□□□□□ -0.45
UBE3B-210ENST00000539599 RSU1Q15404 277 aa12.23□□□□□ -0.45
UBE3B-210ENST00000539599 PRSS54Q6PEW0 395 aa12.23□□□□□ -0.45
UBE3B-210ENST00000539599 ETV3LQ6ZN32 361 aa12.23□□□□□ -0.45
UBE3B-210ENST00000539599 Q96M66 194 aa12.23□□□□□ -0.45
UBE3B-210ENST00000539599 RAB18Q9NP72 206 aa12.23□□□□□ -0.45
UBE3B-210ENST00000539599 TRBV6-7A0A0A0MS04 114 aa12.23□□□□□ -0.45
UBE3B-210ENST00000539599 F8W036 122 aa12.23□□□□□ -0.45
UBE3B-210ENST00000539599 SLC33A1O00400 549 aaPredicted RBP12.23□□□□□ -0.45
UBE3B-210ENST00000539599 BET1O15155 118 aa12.23□□□□□ -0.45
UBE3B-210ENST00000539599 ZNF708P17019 499 aa12.23□□□□□ -0.45
UBE3B-210ENST00000539599 CCNOP22674 350 aa12.23□□□□□ -0.45
UBE3B-210ENST00000539599 CPT2P23786 658 aa12.23□□□□□ -0.45
UBE3B-210ENST00000539599 OTX1P32242 354 aaPredicted RBP12.23□□□□□ -0.45
UBE3B-210ENST00000539599 LPAR6P43657 344 aa12.23□□□□□ -0.45
UBE3B-210ENST00000539599 NPBWR1P48145 328 aa12.23□□□□□ -0.45
UBE3B-210ENST00000539599 B3GALT5-AS1P59052 145 aa12.23□□□□□ -0.45
UBE3B-210ENST00000539599 BLOC1S1P78537 153 aa12.23□□□□□ -0.45
UBE3B-210ENST00000539599 PDSS1Q5T2R2 415 aa12.23□□□□□ -0.45
UBE3B-210ENST00000539599 NUDT16L1Q9BRJ7 211 aaKnown RBP12.23□□□□□ -0.45
UBE3B-210ENST00000539599 SLC5A7Q9GZV3 580 aa12.23□□□□□ -0.45
UBE3B-210ENST00000539599 ZNF700Q9H0M5 742 aa12.23□□□□□ -0.45
UBE3B-210ENST00000539599 SLC6A15Q9H2J7 730 aa12.23□□□□□ -0.45
UBE3B-210ENST00000539599 A0A0U1RQV5 110 aa12.22□□□□□ -0.45
UBE3B-210ENST00000539599 ZNF850A8MQ14 1090 aa12.22□□□□□ -0.45
UBE3B-210ENST00000539599 FGF16O43320 207 aa12.22□□□□□ -0.45
UBE3B-210ENST00000539599 MTRF1O75570 445 aaKnown RBP12.22□□□□□ -0.45
UBE3B-210ENST00000539599 CSTBP04080 98 aaKnown RBP12.22□□□□□ -0.45
UBE3B-210ENST00000539599 FOXG1P55316 489 aaPredicted RBP12.22□□□□□ -0.45
UBE3B-210ENST00000539599 ZNF92Q03936 586 aa12.22□□□□□ -0.45
UBE3B-210ENST00000539599 ZNF239Q16600 458 aaKnown RBP12.22□□□□□ -0.45
UBE3B-210ENST00000539599 CEACAM16Q2WEN9 425 aa12.22□□□□□ -0.45
UBE3B-210ENST00000539599 GGNQ86UU5 652 aa12.22□□□□□ -0.45
UBE3B-210ENST00000539599 SLC30A7Q8NEW0 376 aa12.22□□□□□ -0.45
UBE3B-210ENST00000539599 ERGIC1Q969X5 290 aa12.22□□□□□ -0.45
UBE3B-210ENST00000539599 PHYHIPLQ96FC7 376 aa12.22□□□□□ -0.45
UBE3B-210ENST00000539599 C2orf50Q96LR7 162 aa12.22□□□□□ -0.45
UBE3B-210ENST00000539599 HS3ST6Q96QI5 342 aa12.22□□□□□ -0.45
UBE3B-210ENST00000539599 HES7Q9BYE0 225 aa12.22□□□□□ -0.45
UBE3B-210ENST00000539599 ZNF629Q9UEG4 869 aaPredicted RBP12.22□□□□□ -0.45
UBE3B-210ENST00000539599 RFNGQ9Y644 331 aa12.22□□□□□ -0.45
UBE3B-210ENST00000539599 A0A1B0GV50 99 aa12.22□□□□□ -0.45
UBE3B-210ENST00000539599 LOC102725191A0A1B0GVB3 256 aa12.22□□□□□ -0.45
UBE3B-210ENST00000539599 CEACAM18A8MTB9 384 aa12.22□□□□□ -0.45
UBE3B-210ENST00000539599 C9J4A7 227 aa12.22□□□□□ -0.45
UBE3B-210ENST00000539599 C9JQL5 133 aa12.22□□□□□ -0.45
UBE3B-210ENST00000539599 HSPB6O14558 160 aa12.22□□□□□ -0.45
UBE3B-210ENST00000539599 SYNGR3O43761 229 aa12.22□□□□□ -0.45
UBE3B-210ENST00000539599 TSPAN9O75954 239 aa12.22□□□□□ -0.45
UBE3B-210ENST00000539599 OR5H8P0DN80 308 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms