RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 INSL4Q14641 139 aa10.49□□□□□ -0.73
CLSTN3-208ENST00000538933 OR8B8Q15620 311 aa10.49□□□□□ -0.73
CLSTN3-208ENST00000538933 C22orf42Q6IC83 251 aa10.49□□□□□ -0.73
CLSTN3-208ENST00000538933 ANKRD13BQ86YJ7 626 aa10.49□□□□□ -0.73
CLSTN3-208ENST00000538933 SERPINA12Q8IW75 414 aa10.49□□□□□ -0.73
CLSTN3-208ENST00000538933 PLPP7Q8NBV4 271 aa10.49□□□□□ -0.73
CLSTN3-208ENST00000538933 OR5D14Q8NGL3 314 aa10.49□□□□□ -0.73
CLSTN3-208ENST00000538933 RAB2BQ8WUD1 216 aa10.49□□□□□ -0.73
CLSTN3-208ENST00000538933 PIGCQ92535 297 aa10.49□□□□□ -0.73
CLSTN3-208ENST00000538933 PHYHIPQ92561 330 aa10.49□□□□□ -0.73
CLSTN3-208ENST00000538933 KCTD7Q96MP8 289 aa10.49□□□□□ -0.73
CLSTN3-208ENST00000538933 ZNF48Q96MX3 618 aaPredicted RBP10.49□□□□□ -0.73
CLSTN3-208ENST00000538933 HIST1H2AAQ96QV6 131 aa10.49□□□□□ -0.73
CLSTN3-208ENST00000538933 MRPL37Q9BZE1 423 aaKnown RBP10.49□□□□□ -0.73
CLSTN3-208ENST00000538933 ZNF665Q9H7R5 613 aa10.49□□□□□ -0.73
CLSTN3-208ENST00000538933 ZMAT3Q9HA38 289 aaKnown RBP10.49□□□□□ -0.73
CLSTN3-208ENST00000538933 NOX4Q9NPH5 578 aa10.49□□□□□ -0.73
CLSTN3-208ENST00000538933 BATF3Q9NR55 127 aa10.49□□□□□ -0.73
CLSTN3-208ENST00000538933 TXNL4BQ9NX01 149 aaKnown RBP10.49□□□□□ -0.73
CLSTN3-208ENST00000538933 MMP24Q9Y5R2 645 aa10.49□□□□□ -0.73
CLSTN3-208ENST00000538933 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.48□□□□□ -0.73
CLSTN3-208ENST00000538933 SMIM31A0A1B0GVY4 71 aa10.48□□□□□ -0.73
CLSTN3-208ENST00000538933 ANXA2P2A6NMY6 339 aa10.48□□□□□ -0.73
CLSTN3-208ENST00000538933 IQCF6A8MYZ5 107 aa10.48□□□□□ -0.73
CLSTN3-208ENST00000538933 MAGEB3O15480 346 aa10.48□□□□□ -0.73
CLSTN3-208ENST00000538933 GPX5O75715 221 aa10.48□□□□□ -0.73
CLSTN3-208ENST00000538933 ZNF250P15622 560 aa10.48□□□□□ -0.73
CLSTN3-208ENST00000538933 RAB3AP20336 220 aa10.48□□□□□ -0.73
CLSTN3-208ENST00000538933 KITLGP21583 273 aa10.48□□□□□ -0.73
CLSTN3-208ENST00000538933 CALRP27797 417 aaKnown RBP10.48□□□□□ -0.73
CLSTN3-208ENST00000538933 CRYBB2P43320 205 aa10.48□□□□□ -0.73
CLSTN3-208ENST00000538933 MAGEB1P43366 347 aa10.48□□□□□ -0.73
CLSTN3-208ENST00000538933 TMBIM6P55061 237 aa10.48□□□□□ -0.73
CLSTN3-208ENST00000538933 RPS11P62280 158 aaKnown RBP eCLIP10.48□□□□□ -0.73
CLSTN3-208ENST00000538933 PSG7Q13046 419 aa10.48□□□□□ -0.73
CLSTN3-208ENST00000538933 CNN3Q15417 329 aaKnown RBP10.48□□□□□ -0.73
CLSTN3-208ENST00000538933 ALKBH6Q3KRA9 238 aa10.48□□□□□ -0.73
CLSTN3-208ENST00000538933 CLVS2Q5SYC1 327 aa10.48□□□□□ -0.73
CLSTN3-208ENST00000538933 ZBTB37Q5TC79 503 aa10.48□□□□□ -0.73
CLSTN3-208ENST00000538933 DCAF12L2Q5VW00 463 aa10.48□□□□□ -0.73
CLSTN3-208ENST00000538933 PLCXD3Q63HM9 321 aa10.48□□□□□ -0.73
CLSTN3-208ENST00000538933 MOB3CQ70IA8 216 aa10.48□□□□□ -0.73
CLSTN3-208ENST00000538933 BCL6BQ8N143 479 aaPredicted RBP10.48□□□□□ -0.73
CLSTN3-208ENST00000538933 OR8S1Q8NH09 359 aa10.48□□□□□ -0.73
CLSTN3-208ENST00000538933 PP6455Q8WZ26 134 aa10.48□□□□□ -0.73
CLSTN3-208ENST00000538933 DERL3Q96Q80 235 aa10.48□□□□□ -0.73
CLSTN3-208ENST00000538933 MMP27Q9H306 513 aa10.48□□□□□ -0.73
CLSTN3-208ENST00000538933 MS4A5Q9H3V2 200 aa10.48□□□□□ -0.73
CLSTN3-208ENST00000538933 ZCCHC4Q9H5U6 513 aa10.48□□□□□ -0.73
CLSTN3-208ENST00000538933 C7orf69Q9H7B7 122 aa10.48□□□□□ -0.73
CLSTN3-208ENST00000538933 ABCB9Q9NP78 766 aa10.48□□□□□ -0.73
CLSTN3-208ENST00000538933 TMEM100Q9NV29 134 aa10.48□□□□□ -0.73
CLSTN3-208ENST00000538933 NKIRAS2Q9NYR9 191 aa10.48□□□□□ -0.73
CLSTN3-208ENST00000538933 TAS2R4Q9NYW5 299 aa10.48□□□□□ -0.73
CLSTN3-208ENST00000538933 TAAR3PQ9P1P4 343 aa10.48□□□□□ -0.73
CLSTN3-208ENST00000538933 NOP16Q9Y3C1 178 aaKnown RBP10.48□□□□□ -0.73
CLSTN3-208ENST00000538933 DPPA5A6NC42 116 aa10.47□□□□□ -0.73
CLSTN3-208ENST00000538933 ANKRD61A6NGH8 418 aa10.47□□□□□ -0.73
CLSTN3-208ENST00000538933 ZNF850A8MQ14 1090 aa10.47□□□□□ -0.73
CLSTN3-208ENST00000538933 CLDN34H7C241 214 aa10.47□□□□□ -0.73
CLSTN3-208ENST00000538933 M0R233 179 aa10.47□□□□□ -0.73
CLSTN3-208ENST00000538933 PDCD5O14737 125 aa10.47□□□□□ -0.73
CLSTN3-208ENST00000538933 NRASP01111 189 aa10.47□□□□□ -0.73
CLSTN3-208ENST00000538933 HCKP08631 526 aa10.47□□□□□ -0.73
CLSTN3-208ENST00000538933 ACKR3P25106 362 aa10.47□□□□□ -0.73
CLSTN3-208ENST00000538933 FGF9P31371 208 aaPredicted RBP10.47□□□□□ -0.73
CLSTN3-208ENST00000538933 PRDX4Q13162 271 aa10.47□□□□□ -0.73
CLSTN3-208ENST00000538933 OR8G1Q15617 311 aa10.47□□□□□ -0.73
CLSTN3-208ENST00000538933 CD200R1LQ6Q8B3 271 aa10.47□□□□□ -0.73
CLSTN3-208ENST00000538933 RBMS3Q6XE24 437 aaKnown RBP10.47□□□□□ -0.73
CLSTN3-208ENST00000538933 TMEM91Q6ZNR0 172 aa10.47□□□□□ -0.73
CLSTN3-208ENST00000538933 C1QL4Q86Z23 238 aa10.47□□□□□ -0.73
CLSTN3-208ENST00000538933 ZDHHC23Q8IYP9 409 aa10.47□□□□□ -0.73
CLSTN3-208ENST00000538933 PARP16Q8N5Y8 322 aa10.47□□□□□ -0.73
CLSTN3-208ENST00000538933 OR13C9Q8NGT0 318 aa10.47□□□□□ -0.73
CLSTN3-208ENST00000538933 ZNF420Q8TAQ5 688 aaPredicted RBP10.47□□□□□ -0.73
CLSTN3-208ENST00000538933 WFDC12Q8WWY7 111 aa10.47□□□□□ -0.73
CLSTN3-208ENST00000538933 RPL3LQ92901 407 aaKnown RBP10.47□□□□□ -0.73
CLSTN3-208ENST00000538933 ADAT3Q96EY9 351 aaPredicted RBP10.47□□□□□ -0.73
CLSTN3-208ENST00000538933 TECTBQ96PL2 329 aa10.47□□□□□ -0.73
CLSTN3-208ENST00000538933 CENPOQ9BU64 300 aa10.47□□□□□ -0.73
CLSTN3-208ENST00000538933 NAA50Q9GZZ1 169 aaKnown RBP10.47□□□□□ -0.73
CLSTN3-208ENST00000538933 SLC22A4Q9H015 551 aa10.47□□□□□ -0.73
CLSTN3-208ENST00000538933 GPR173Q9NS66 373 aa10.47□□□□□ -0.73
CLSTN3-208ENST00000538933 CYSLTR2Q9NS75 346 aa10.47□□□□□ -0.73
CLSTN3-208ENST00000538933 MRPL15Q9P015 296 aaKnown RBP10.47□□□□□ -0.73
CLSTN3-208ENST00000538933 ZNF69Q9UC07 566 aa10.47□□□□□ -0.73
CLSTN3-208ENST00000538933 CGGBP1Q9UFW8 167 aaPredicted RBP10.47□□□□□ -0.73
CLSTN3-208ENST00000538933 RSL24D1Q9UHA3 163 aaKnown RBP10.47□□□□□ -0.73
CLSTN3-208ENST00000538933 FOXJ3Q9UPW0 622 aa10.47□□□□□ -0.73
CLSTN3-208ENST00000538933 SLC7A11Q9UPY5 501 aa10.47□□□□□ -0.73
CLSTN3-208ENST00000538933 MPC1Q9Y5U8 109 aa10.47□□□□□ -0.73
CLSTN3-208ENST00000538933 TRBV5-7A0A0A0MS05 114 aa10.46□□□□□ -0.73
CLSTN3-208ENST00000538933 SULT1B1O43704 296 aa10.46□□□□□ -0.73
CLSTN3-208ENST00000538933 GABARAPO95166 117 aa10.46□□□□□ -0.73
CLSTN3-208ENST00000538933 IGHV3-13P01766 116 aa10.46□□□□□ -0.73
CLSTN3-208ENST00000538933 MAS1P04201 325 aa10.46□□□□□ -0.73
CLSTN3-208ENST00000538933 UCHL1P09936 223 aa10.46□□□□□ -0.73
CLSTN3-208ENST00000538933 ATF1P18846 271 aa10.46□□□□□ -0.73
CLSTN3-208ENST00000538933 SRMP19623 302 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms