RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 Q8N7P7 452 aa6.93□□□□□ -1.3
SPARC-208ENST00000538026 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.93□□□□□ -1.3
SPARC-208ENST00000538026 POC1AQ8NBT0 407 aa6.93□□□□□ -1.3
SPARC-208ENST00000538026 SPATA3Q8NHX4 192 aa6.93□□□□□ -1.3
SPARC-208ENST00000538026 STMN2Q93045 179 aa6.93□□□□□ -1.3
SPARC-208ENST00000538026 FGGYQ96C11 551 aa6.93□□□□□ -1.3
SPARC-208ENST00000538026 C12orf43Q96C57 262 aaKnown RBP6.93□□□□□ -1.3
SPARC-208ENST00000538026 TECTBQ96PL2 329 aa6.93□□□□□ -1.3
SPARC-208ENST00000538026 NRIP2Q9BQI9 281 aa6.93□□□□□ -1.3
SPARC-208ENST00000538026 JAM3Q9BX67 310 aa6.93□□□□□ -1.3
SPARC-208ENST00000538026 SIRPDQ9H106 197 aa6.93□□□□□ -1.3
SPARC-208ENST00000538026 OCEL1Q9H607 264 aa6.93□□□□□ -1.3
SPARC-208ENST00000538026 HES4Q9HCC6 221 aa6.93□□□□□ -1.3
SPARC-208ENST00000538026 ABCB9Q9NP78 766 aa6.93□□□□□ -1.3
SPARC-208ENST00000538026 MTCH1Q9NZJ7 389 aa6.93□□□□□ -1.3
SPARC-208ENST00000538026 OR5V1Q9UGF6 321 aa6.93□□□□□ -1.3
SPARC-208ENST00000538026 RPUSD1Q9UJJ7 312 aaKnown RBP6.93□□□□□ -1.3
SPARC-208ENST00000538026 IGKV1-12A0A0C4DH73 117 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 CENPVL3A0A0U1RRI6 287 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 A0A1B0GVI7 797 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 MDFIC2A0A1B0GVS7 189 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 ANKRD61A6NGH8 418 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 RFPL4AA6NLU0 287 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 OR2AT4A6NND4 320 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 RFPL4AL1F8VTS6 287 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 J3QT63 122 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 SIGLEC5O15389 551 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 TCF21O43680 179 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 MPZL2O60487 215 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 ZFPL1O95159 310 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 IGKV1D-12P01611 117 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 GLRA1P23415 457 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 HAAOP46952 286 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 NPY4RP50391 375 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 CCR9P51686 369 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 HILS1P60008 231 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 ARF6P62330 175 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 ACTC1P68032 377 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 ACTA1P68133 377 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 RAB40BQ12829 278 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 IKZF1Q13422 519 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 KCNJ8Q15842 424 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 OR2G6Q5TZ20 316 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 RUSC1-AS1Q66K80 236 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 ACP7Q6ZNF0 438 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 C9orf139Q6ZV77 190 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 USP43Q70EL4 1123 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 NLRC3Q7RTR2 1065 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 SYS1Q8N2H4 156 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 C11orf42Q8N5U0 333 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 SIGLECL1Q8N7X8 197 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 ZNRF1Q8ND25 227 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 TRMT10AQ8TBZ6 339 aaKnown RBP6.92□□□□□ -1.3
SPARC-208ENST00000538026 NPRL2Q8WTW4 380 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 CYGBQ8WWM9 190 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 SGCDQ92629 289 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 TFAP2CQ92754 450 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 TAF15Q92804 592 aaKnown RBP eCLIP6.92□□□□□ -1.3
SPARC-208ENST00000538026 GGHQ92820 318 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 SDSLQ96GA7 329 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 Q96MT0 163 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 HIST1H2AAQ96QV6 131 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 PDCD1LG2Q9BQ51 273 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 ADI1Q9BV57 179 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 CHST5Q9GZS9 411 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 ELL3Q9HB65 397 aaPredicted RBP6.92□□□□□ -1.3
SPARC-208ENST00000538026 NLKQ9UBE8 527 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 IL36RNQ9UBH0 155 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 NUP50Q9UKX7 468 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 RPL36Q9Y3U8 105 aaKnown RBP6.92□□□□□ -1.3
SPARC-208ENST00000538026 WNK1Q9H4A3 2382 aa6.92□□□□□ -1.3
SPARC-208ENST00000538026 FAM230AA0A1W2PPH8 454 aa6.91□□□□□ -1.3
SPARC-208ENST00000538026 ZNF879B4DU55 563 aa6.91□□□□□ -1.3
SPARC-208ENST00000538026 ENSAO43768 121 aaKnown RBP6.91□□□□□ -1.3
SPARC-208ENST00000538026 XPNPEP2O43895 674 aa6.91□□□□□ -1.3
SPARC-208ENST00000538026 FADS2O95864 444 aaKnown RBP6.91□□□□□ -1.3
SPARC-208ENST00000538026 HTR1AP08908 422 aa6.91□□□□□ -1.3
SPARC-208ENST00000538026 UBCP0CG48 685 aaKnown RBP6.91□□□□□ -1.3
SPARC-208ENST00000538026 ATF1P18846 271 aa6.91□□□□□ -1.3
SPARC-208ENST00000538026 CAPGP40121 348 aa6.91□□□□□ -1.3
SPARC-208ENST00000538026 NPBWR2P48146 333 aa6.91□□□□□ -1.3
SPARC-208ENST00000538026 FUT6P51993 359 aa6.91□□□□□ -1.3
SPARC-208ENST00000538026 ERVFRD-1P60508 538 aa6.91□□□□□ -1.3
SPARC-208ENST00000538026 GABPB1Q06547 395 aaPredicted RBP6.91□□□□□ -1.3
SPARC-208ENST00000538026 TMEM244Q5VVB8 128 aa6.91□□□□□ -1.3
SPARC-208ENST00000538026 TTC23Q5W5X9 447 aa6.91□□□□□ -1.3
SPARC-208ENST00000538026 HCP5Q6MZN7 132 aa6.91□□□□□ -1.3
SPARC-208ENST00000538026 ZNF529Q6P280 563 aa6.91□□□□□ -1.3
SPARC-208ENST00000538026 BRD3OSQ6XYD6 125 aa6.91□□□□□ -1.3
SPARC-208ENST00000538026 ZNF573Q86YE8 665 aa6.91□□□□□ -1.3
SPARC-208ENST00000538026 PIP4P2Q8N4L2 257 aa6.91□□□□□ -1.3
SPARC-208ENST00000538026 DHRSXQ8N5I4 330 aa6.91□□□□□ -1.3
SPARC-208ENST00000538026 C8orf46Q8TAG6 207 aa6.91□□□□□ -1.3
SPARC-208ENST00000538026 ZNF671Q8TAW3 534 aa6.91□□□□□ -1.3
SPARC-208ENST00000538026 TMEM158Q8WZ71 300 aa6.91□□□□□ -1.3
SPARC-208ENST00000538026 ST8SIA4Q92187 359 aa6.91□□□□□ -1.3
SPARC-208ENST00000538026 TNFRSF14Q92956 283 aa6.91□□□□□ -1.3
SPARC-208ENST00000538026 AJUBAQ96IF1 538 aa6.91□□□□□ -1.3
SPARC-208ENST00000538026 WDFY2Q96P53 400 aa6.91□□□□□ -1.3
SPARC-208ENST00000538026 DUX5Q96PT3 197 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms