RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 LRTM2Q8N967 370 aa10.65□□□□□ -0.7
CPSF7-218ENST00000537641 MRPL24Q96A35 216 aaKnown RBP10.65□□□□□ -0.7
CPSF7-218ENST00000537641 CLDN23Q96B33 292 aa10.65□□□□□ -0.7
CPSF7-218ENST00000537641 S100A13Q99584 98 aa10.65□□□□□ -0.7
CPSF7-218ENST00000537641 DUSP15Q9H1R2 295 aaPredicted RBP10.65□□□□□ -0.7
CPSF7-218ENST00000537641 PRO3102Q9H379 93 aa10.65□□□□□ -0.7
CPSF7-218ENST00000537641 SMDT1Q9H4I9 107 aa10.65□□□□□ -0.7
CPSF7-218ENST00000537641 GSN-AS1Q9NRJ2 163 aa10.65□□□□□ -0.7
CPSF7-218ENST00000537641 A6NLC8 198 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 STMND1H3BQB6 276 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 DHRS3O75911 302 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 SERPINA2P20848 420 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 ACKR3P25106 362 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 CAMLGP49069 296 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 LSM6P62312 80 aaKnown RBP10.64□□□□□ -0.71
CPSF7-218ENST00000537641 FABP9Q0Z7S8 132 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 C1QL4Q86Z23 238 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 SLC38A9Q8NBW4 561 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 OR1J1Q8NGS3 322 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 POC1BQ8TC44 478 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 MAFIPQ8WZ33 124 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 ERGIC1Q969X5 290 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 GALNT14Q96FL9 552 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 OXGR1Q96P68 337 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 SUCNR1Q9BXA5 334 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 NAA60Q9H7X0 242 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 SPACA1Q9HBV2 294 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 FGF21Q9NSA1 209 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 C19orf12Q9NSK7 152 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 ZNF701Q9NV72 531 aaPredicted RBP10.64□□□□□ -0.71
CPSF7-218ENST00000537641 PADI1Q9ULC6 663 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 KCNIP3Q9Y2W7 256 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 A0A1W2PPH5 198 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 C2orf72A6NCS6 295 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 M0R036 132 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 RER1O15258 196 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 TOX3O15405 576 aaPredicted RBP10.64□□□□□ -0.71
CPSF7-218ENST00000537641 EIF1BO60739 113 aaKnown RBP10.64□□□□□ -0.71
CPSF7-218ENST00000537641 ZNF43P17038 809 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 DTYMKP23919 212 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 CDAP32320 146 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 EIF1P41567 113 aaKnown RBP10.64□□□□□ -0.71
CPSF7-218ENST00000537641 SLC35A1P78382 337 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 IL13RA2Q14627 380 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 C1orf189Q5VU69 101 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 RPUSD3Q6P087 351 aaKnown RBP10.64□□□□□ -0.71
CPSF7-218ENST00000537641 GALNTL5Q7Z4T8 443 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 C1QL2Q7Z5L3 287 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 NFAM1Q8NET5 270 aaPredicted RBP10.64□□□□□ -0.71
CPSF7-218ENST00000537641 STT3BQ8TCJ2 826 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 HAS2Q92819 552 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 HLA-CQ95604 372 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 CYYR1Q96J86 154 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 LYZL4Q96KX0 146 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 SMIM3Q9BZL3 60 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 TGIF2Q9GZN2 237 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 CHST5Q9GZS9 411 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 NIT2Q9NQR4 276 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 ANXA10Q9UJ72 324 aa10.64□□□□□ -0.71
CPSF7-218ENST00000537641 ARID1BQ8NFD5 2236 aaPredicted RBP10.64□□□□□ -0.71
CPSF7-218ENST00000537641 LOC102725191A0A1B0GVB3 256 aa10.63□□□□□ -0.71
CPSF7-218ENST00000537641 A0A1W2PPE3 182 aa10.63□□□□□ -0.71
CPSF7-218ENST00000537641 SHISA8B8ZZ34 492 aa10.63□□□□□ -0.71
CPSF7-218ENST00000537641 UMAD1C9J7I0 102 aa10.63□□□□□ -0.71
CPSF7-218ENST00000537641 H7C1Q1 480 aa10.63□□□□□ -0.71
CPSF7-218ENST00000537641 K7ESF4 209 aa10.63□□□□□ -0.71
CPSF7-218ENST00000537641 AP4M1O00189 453 aa10.63□□□□□ -0.71
CPSF7-218ENST00000537641 TLX3O43711 291 aaPredicted RBP10.63□□□□□ -0.71
CPSF7-218ENST00000537641 EFNA2O43921 213 aa10.63□□□□□ -0.71
CPSF7-218ENST00000537641 NME2P1O60361 137 aa10.63□□□□□ -0.71
CPSF7-218ENST00000537641 SCGB1D2O95969 90 aa10.63□□□□□ -0.71
CPSF7-218ENST00000537641 MBPP02686 304 aaPredicted RBP10.63□□□□□ -0.71
CPSF7-218ENST00000537641 QDPRP09417 244 aa10.63□□□□□ -0.71
CPSF7-218ENST00000537641 EIF2S3P41091 472 aaKnown RBP10.63□□□□□ -0.71
CPSF7-218ENST00000537641 CXCL12P48061 93 aa10.63□□□□□ -0.71
CPSF7-218ENST00000537641 SULT1A1P50225 295 aa10.63□□□□□ -0.71
CPSF7-218ENST00000537641 POLR2GP62487 172 aaKnown RBP eCLIP10.63□□□□□ -0.71
CPSF7-218ENST00000537641 ZNF616Q08AN1 781 aa10.63□□□□□ -0.71
CPSF7-218ENST00000537641 MFAP5Q13361 173 aa10.63□□□□□ -0.71
CPSF7-218ENST00000537641 TMEM187Q14656 261 aa10.63□□□□□ -0.71
CPSF7-218ENST00000537641 KRBOX4Q5JUW0 171 aa10.63□□□□□ -0.71
CPSF7-218ENST00000537641 LINC00469Q8N7U9 141 aa10.63□□□□□ -0.71
CPSF7-218ENST00000537641 APCDD1LQ8NCL9 501 aa10.63□□□□□ -0.71
CPSF7-218ENST00000537641 OR8G5Q8NG78 346 aa10.63□□□□□ -0.71
CPSF7-218ENST00000537641 Q96M66 194 aa10.63□□□□□ -0.71
CPSF7-218ENST00000537641 SLC35B3Q9H1N7 401 aa10.63□□□□□ -0.71
CPSF7-218ENST00000537641 KCNJ16Q9NPI9 418 aa10.63□□□□□ -0.71
CPSF7-218ENST00000537641 KLRF1Q9NZS2 232 aa10.63□□□□□ -0.71
CPSF7-218ENST00000537641 MCTS1Q9ULC4 181 aaKnown RBP10.63□□□□□ -0.71
CPSF7-218ENST00000537641 PRUNE2Q8WUY3 3088 aa10.63□□□□□ -0.71
CPSF7-218ENST00000537641 IGKV1D-8A0A087WSZ0 117 aa10.62□□□□□ -0.71
CPSF7-218ENST00000537641 ZNF726A6NNF4 738 aa10.62□□□□□ -0.71
CPSF7-218ENST00000537641 DHRS7CA6NNS2 312 aa10.62□□□□□ -0.71
CPSF7-218ENST00000537641 IFNA17P01571 189 aa10.62□□□□□ -0.71
CPSF7-218ENST00000537641 OR8U8P0C7N1 319 aa10.62□□□□□ -0.71
CPSF7-218ENST00000537641 CBR1P16152 277 aa10.62□□□□□ -0.71
CPSF7-218ENST00000537641 ANOS1P23352 680 aa10.62□□□□□ -0.71
CPSF7-218ENST00000537641 FKBP2P26885 142 aaKnown RBP10.62□□□□□ -0.71
CPSF7-218ENST00000537641 CHATP28329 748 aa10.62□□□□□ -0.71
CPSF7-218ENST00000537641 AKR1C3P42330 323 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms