RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 OR4D6Q8NGJ1 314 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 OR2AJ1Q8NGZ0 328 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 CMTM2Q8TAZ6 248 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 VN1R17PQ8TDU5 208 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 EMG1Q92979 244 aaKnown RBP7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 TIFAQ96CG3 184 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 REEP6Q96HR9 211 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 C4orf45Q96LM5 186 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 AIF1LQ9BQI0 150 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 ABHD6Q9BV23 337 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 RRAGCQ9HB90 399 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 NSG1A0A0A6YYJ2 146 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 A0A1B0GTH9 108 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 DCDC2BA2VCK2 349 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 ZNF814B7Z6K7 855 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 WNT10BO00744 389 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 ARPC3O15145 178 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 LYPD3O95274 346 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 TYMSP04818 313 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 TAF10Q12962 218 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 NSDHLQ15738 373 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 FAM78AQ5JUQ0 283 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 UNQ5815/PRO19632Q6UWF5 114 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 DPPA3Q6W0C5 159 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 C7orf61Q8IZ16 206 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 KLHDC1Q8N7A1 406 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 ZNF709Q8N972 641 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 RHBDD1Q8TEB9 315 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 ASB5Q8WWX0 329 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 TMEM234Q8WY98 164 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 GPR146Q96CH1 333 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 P2RX4Q99571 388 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 MACROD1Q9BQ69 325 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 ABHD14AQ9BUJ0 271 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 SLC35D1Q9NTN3 355 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 MRPL22Q9NWU5 206 aaKnown RBP7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 CDC42EP3Q9UKI2 254 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 FAM166BA8MTA8 275 aa7.52□□□□□ -1.21
SRGAP1-202ENST00000537556 TOX4O94842 621 aa7.52□□□□□ -1.21
SRGAP1-202ENST00000537556 VAMP5O95183 116 aa7.52□□□□□ -1.21
SRGAP1-202ENST00000537556 SEMA4FO95754 770 aa7.52□□□□□ -1.21
SRGAP1-202ENST00000537556 DDAH2O95865 285 aa7.52□□□□□ -1.21
SRGAP1-202ENST00000537556 HRASP01112 189 aa7.52□□□□□ -1.21
SRGAP1-202ENST00000537556 DBIP07108 87 aaKnown RBP7.52□□□□□ -1.21
SRGAP1-202ENST00000537556 MMP9P14780 707 aa7.52□□□□□ -1.21
SRGAP1-202ENST00000537556 GZMHP20718 246 aa7.52□□□□□ -1.21
SRGAP1-202ENST00000537556 MSR1P21757 451 aa7.52□□□□□ -1.21
SRGAP1-202ENST00000537556 PSMB5P28074 263 aa7.52□□□□□ -1.21
SRGAP1-202ENST00000537556 MPLP40238 635 aa7.52□□□□□ -1.21
SRGAP1-202ENST00000537556 IL13RA2Q14627 380 aa7.52□□□□□ -1.21
SRGAP1-202ENST00000537556 LINC01590Q5TEZ4 76 aa7.52□□□□□ -1.21
SRGAP1-202ENST00000537556 SLC8B1Q6J4K2 584 aa7.52□□□□□ -1.21
SRGAP1-202ENST00000537556 TMEM108Q6UXF1 575 aa7.52□□□□□ -1.21
SRGAP1-202ENST00000537556 OR2T10Q8NGZ9 312 aa7.52□□□□□ -1.21
SRGAP1-202ENST00000537556 CPT1CQ8TCG5 803 aa7.52□□□□□ -1.21
SRGAP1-202ENST00000537556 GNPNAT1Q96EK6 184 aaPredicted RBP7.52□□□□□ -1.21
SRGAP1-202ENST00000537556 NUDT16L1Q9BRJ7 211 aaKnown RBP7.52□□□□□ -1.21
SRGAP1-202ENST00000537556 CISD1Q9NZ45 108 aaKnown RBP7.52□□□□□ -1.21
SRGAP1-202ENST00000537556 ZNF219Q9P2Y4 722 aaPredicted RBP7.52□□□□□ -1.21
SRGAP1-202ENST00000537556 CGGBP1Q9UFW8 167 aaPredicted RBP7.52□□□□□ -1.21
SRGAP1-202ENST00000537556 GPR34Q9UPC5 381 aa7.52□□□□□ -1.21
SRGAP1-202ENST00000537556 RNF115Q9Y4L5 304 aa7.52□□□□□ -1.21
SRGAP1-202ENST00000537556 PLXND1Q9Y4D7 1925 aa7.52□□□□□ -1.21
SRGAP1-202ENST00000537556 TMEM202A6NGA9 273 aa7.52□□□□□ -1.21
SRGAP1-202ENST00000537556 ZIC2O95409 532 aaPredicted RBP7.52□□□□□ -1.21
SRGAP1-202ENST00000537556 OR4Q2P0C623 313 aa7.52□□□□□ -1.21
SRGAP1-202ENST00000537556 CSNK2A2P19784 350 aaPredicted RBP7.52□□□□□ -1.21
SRGAP1-202ENST00000537556 ATP6V0CP27449 155 aa7.52□□□□□ -1.21
SRGAP1-202ENST00000537556 ZFP36L1Q07352 338 aaKnown RBP7.52□□□□□ -1.21
SRGAP1-202ENST00000537556 SCGB2A2Q13296 93 aa7.52□□□□□ -1.21
SRGAP1-202ENST00000537556 PCK2Q16822 640 aa7.52□□□□□ -1.21
SRGAP1-202ENST00000537556 C16orf82Q7Z2V1 217 aa7.52□□□□□ -1.21
SRGAP1-202ENST00000537556 LINC01555Q8NAE3 123 aa7.52□□□□□ -1.21
SRGAP1-202ENST00000537556 OR5H2Q8NGV7 314 aa7.52□□□□□ -1.21
SRGAP1-202ENST00000537556 CLN8Q9UBY8 286 aa7.52□□□□□ -1.21
SRGAP1-202ENST00000537556 NAT8Q9UHE5 227 aa7.52□□□□□ -1.21
SRGAP1-202ENST00000537556 B3GALT5Q9Y2C3 310 aa7.52□□□□□ -1.21
SRGAP1-202ENST00000537556 RCL1Q9Y2P8 373 aaKnown RBP7.52□□□□□ -1.21
SRGAP1-202ENST00000537556 A0A1B0GV72 72 aa7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 ARL5CA6NH57 179 aa7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 ATXN7O15265 892 aaPredicted RBP7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 NDUFS4O43181 175 aa7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 COCHO43405 550 aa7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 TSPAN6O43657 245 aa7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 PDGFBP01127 241 aaPredicted RBP7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 CKMP06732 381 aa7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 FSTP19883 344 aa7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 GLRA1P23415 457 aa7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 SPINT3P49223 89 aa7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 SNAI3Q3KNW1 292 aa7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 ARHGAP11BQ3KRB8 267 aa7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 C1orf100Q5SVJ3 147 aa7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 C9orf50Q5SZB4 431 aa7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 SP5Q6BEB4 398 aaPredicted RBP7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 FDX2Q6P4F2 183 aa7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 KCNIP4Q6PIL6 250 aa7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 S100A7AQ86SG5 101 aa7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 CDC20BQ86Y33 519 aa7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 NPAS4Q8IUM7 802 aa7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 NECAP1Q8NC96 275 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms