RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 PURGQ9UJV8 347 aaKnown RBP13.98□□□□□ -0.17
CHMP1A-202ENST00000535997 FAM74A7A6NL05 159 aa13.98□□□□□ -0.17
CHMP1A-202ENST00000535997 NTN3O00634 580 aaPredicted RBP13.98□□□□□ -0.17
CHMP1A-202ENST00000535997 CCL4P13236 92 aa13.98□□□□□ -0.17
CHMP1A-202ENST00000535997 ACKR3P25106 362 aa13.98□□□□□ -0.17
CHMP1A-202ENST00000535997 PTGER4P35408 488 aa13.98□□□□□ -0.17
CHMP1A-202ENST00000535997 ZFP36L1Q07352 338 aaKnown RBP13.98□□□□□ -0.17
CHMP1A-202ENST00000535997 RBM39Q14498 530 aaKnown RBP13.98□□□□□ -0.17
CHMP1A-202ENST00000535997 RSU1Q15404 277 aa13.98□□□□□ -0.17
CHMP1A-202ENST00000535997 FAM74A3Q4VXF1 159 aa13.98□□□□□ -0.17
CHMP1A-202ENST00000535997 IL34Q6ZMJ4 242 aa13.98□□□□□ -0.17
CHMP1A-202ENST00000535997 OR1F12Q8NHA8 337 aa13.98□□□□□ -0.17
CHMP1A-202ENST00000535997 CNTNAP3BQ96NU0 1288 aa13.98□□□□□ -0.17
CHMP1A-202ENST00000535997 IER2Q9BTL4 223 aa13.98□□□□□ -0.17
CHMP1A-202ENST00000535997 CNTNAP3Q9BZ76 1288 aa13.98□□□□□ -0.17
CHMP1A-202ENST00000535997 GPR173Q9NS66 373 aa13.98□□□□□ -0.17
CHMP1A-202ENST00000535997 ZNF705EA8MWA4 302 aaPredicted RBP13.97□□□□□ -0.17
CHMP1A-202ENST00000535997 SFTPBP07988 381 aa13.97□□□□□ -0.17
CHMP1A-202ENST00000535997 AKR1C2P52895 323 aa13.97□□□□□ -0.17
CHMP1A-202ENST00000535997 AKR1C1Q04828 323 aa13.97□□□□□ -0.17
CHMP1A-202ENST00000535997 DHRS11Q6UWP2 260 aa13.97□□□□□ -0.17
CHMP1A-202ENST00000535997 ASCL4Q6XD76 172 aa13.97□□□□□ -0.17
CHMP1A-202ENST00000535997 ADAMTS17Q8TE56 1095 aa13.97□□□□□ -0.17
CHMP1A-202ENST00000535997 KCNE4Q8WWG9 221 aa13.97□□□□□ -0.17
CHMP1A-202ENST00000535997 REEP6Q96HR9 211 aa13.97□□□□□ -0.17
CHMP1A-202ENST00000535997 CRLF2Q9HC73 371 aa13.97□□□□□ -0.17
CHMP1A-202ENST00000535997 ACKR4Q9NPB9 350 aa13.97□□□□□ -0.17
CHMP1A-202ENST00000535997 ZNF391Q9UJN7 358 aa13.97□□□□□ -0.17
CHMP1A-202ENST00000535997 CRYM-AS1A6NIL9 109 aa13.97□□□□□ -0.17
CHMP1A-202ENST00000535997 OR5H8P0DN80 308 aa13.97□□□□□ -0.17
CHMP1A-202ENST00000535997 SRD5A2P31213 254 aa13.97□□□□□ -0.17
CHMP1A-202ENST00000535997 RBP2P50120 134 aa13.97□□□□□ -0.17
CHMP1A-202ENST00000535997 CARD18P57730 90 aa13.97□□□□□ -0.17
CHMP1A-202ENST00000535997 B3GALT5-AS1P59052 145 aa13.97□□□□□ -0.17
CHMP1A-202ENST00000535997 S100A10P60903 97 aa13.97□□□□□ -0.17
CHMP1A-202ENST00000535997 SCRN3Q0VDG4 424 aa13.97□□□□□ -0.17
CHMP1A-202ENST00000535997 CNN3Q15417 329 aaKnown RBP13.97□□□□□ -0.17
CHMP1A-202ENST00000535997 IAH1Q2TAA2 248 aaPredicted RBP13.97□□□□□ -0.17
CHMP1A-202ENST00000535997 CPT1CQ8TCG5 803 aa13.97□□□□□ -0.17
CHMP1A-202ENST00000535997 ZNF775Q96BV0 537 aaPredicted RBP13.97□□□□□ -0.17
CHMP1A-202ENST00000535997 SMIM8Q96KF7 97 aa13.97□□□□□ -0.17
CHMP1A-202ENST00000535997 FAAP24Q9BTP7 215 aa13.97□□□□□ -0.17
CHMP1A-202ENST00000535997 OR2S2Q9NQN1 319 aa13.97□□□□□ -0.17
CHMP1A-202ENST00000535997 PADI1Q9ULC6 663 aa13.97□□□□□ -0.17
CHMP1A-202ENST00000535997 IFNA21P01568 189 aa13.96□□□□□ -0.17
CHMP1A-202ENST00000535997 CFIP05156 583 aa13.96□□□□□ -0.17
CHMP1A-202ENST00000535997 HKR1P10072 659 aa13.96□□□□□ -0.17
CHMP1A-202ENST00000535997 DTYMKP23919 212 aa13.96□□□□□ -0.17
CHMP1A-202ENST00000535997 DUSP3P51452 185 aaPredicted RBP13.96□□□□□ -0.17
CHMP1A-202ENST00000535997 PJVKQ0ZLH3 352 aa13.96□□□□□ -0.17
CHMP1A-202ENST00000535997 TAF9Q16594 264 aa13.96□□□□□ -0.17
CHMP1A-202ENST00000535997 RSPO4Q2I0M5 234 aaPredicted RBP13.96□□□□□ -0.17
CHMP1A-202ENST00000535997 ZNF468Q5VIY5 522 aaPredicted RBP13.96□□□□□ -0.17
CHMP1A-202ENST00000535997 ZNF774Q6NX45 483 aa13.96□□□□□ -0.17
CHMP1A-202ENST00000535997 PUSL1Q8N0Z8 303 aaKnown RBP13.96□□□□□ -0.17
CHMP1A-202ENST00000535997 OR2AE1Q8NHA4 323 aa13.96□□□□□ -0.17
CHMP1A-202ENST00000535997 FNDC9Q8TBE3 224 aa13.96□□□□□ -0.17
CHMP1A-202ENST00000535997 TMEM38BQ9NVV0 291 aa13.96□□□□□ -0.17
CHMP1A-202ENST00000535997 TUBD1Q9UJT1 453 aa13.96□□□□□ -0.17
CHMP1A-202ENST00000535997 CARHSP1Q9Y2V2 147 aaKnown RBP13.96□□□□□ -0.17
CHMP1A-202ENST00000535997 KIAA1549Q9HCM3 1950 aa13.96□□□□□ -0.17
CHMP1A-202ENST00000535997 FAM230AA0A1W2PPH8 454 aa13.95□□□□□ -0.18
CHMP1A-202ENST00000535997 F8W036 122 aa13.95□□□□□ -0.18
CHMP1A-202ENST00000535997 GPR31O00270 319 aa13.95□□□□□ -0.18
CHMP1A-202ENST00000535997 LCATP04180 440 aa13.95□□□□□ -0.18
CHMP1A-202ENST00000535997 H2AFB1P0C5Y9 115 aa13.95□□□□□ -0.18
CHMP1A-202ENST00000535997 ZNF708P17019 499 aa13.95□□□□□ -0.18
CHMP1A-202ENST00000535997 ADCYAP1P18509 176 aa13.95□□□□□ -0.18
CHMP1A-202ENST00000535997 FOLR3P41439 243 aa13.95□□□□□ -0.18
CHMP1A-202ENST00000535997 BLOC1S1P78537 153 aa13.95□□□□□ -0.18
CHMP1A-202ENST00000535997 CHAF1BQ13112 559 aa13.95□□□□□ -0.18
CHMP1A-202ENST00000535997 MST1LQ2TV78 715 aa13.95□□□□□ -0.18
CHMP1A-202ENST00000535997 ZNF528Q3MIS6 628 aa13.95□□□□□ -0.18
CHMP1A-202ENST00000535997 OR4A4PQ8NGN8 299 aa13.95□□□□□ -0.18
CHMP1A-202ENST00000535997 HDHD3Q9BSH5 251 aaPredicted RBP13.95□□□□□ -0.18
CHMP1A-202ENST00000535997 TAF9BQ9HBM6 251 aa13.95□□□□□ -0.18
CHMP1A-202ENST00000535997 NECAP2Q9NVZ3 263 aa13.95□□□□□ -0.18
CHMP1A-202ENST00000535997 KCNIP3Q9Y2W7 256 aa13.95□□□□□ -0.18
CHMP1A-202ENST00000535997 CCDC187A0A096LP49 1063 aa13.95□□□□□ -0.18
CHMP1A-202ENST00000535997 OR6C6A6NF89 314 aa13.95□□□□□ -0.18
CHMP1A-202ENST00000535997 ANGPTL7O43827 346 aa13.95□□□□□ -0.18
CHMP1A-202ENST00000535997 NTF4P34130 210 aa13.95□□□□□ -0.18
CHMP1A-202ENST00000535997 KRTAP27-1Q3LI81 207 aa13.95□□□□□ -0.18
CHMP1A-202ENST00000535997 TMEM42Q69YG0 159 aa13.95□□□□□ -0.18
CHMP1A-202ENST00000535997 LHFPL2Q6ZUX7 228 aa13.95□□□□□ -0.18
CHMP1A-202ENST00000535997 BORCS8Q96FH0 119 aa13.95□□□□□ -0.18
CHMP1A-202ENST00000535997 RGCCQ9H4X1 137 aa13.95□□□□□ -0.18
CHMP1A-202ENST00000535997 IGKV1-27A0A075B6S5 117 aa13.94□□□□□ -0.18
CHMP1A-202ENST00000535997 SPRY1O43609 319 aaPredicted RBP13.94□□□□□ -0.18
CHMP1A-202ENST00000535997 CST4P01036 141 aa13.94□□□□□ -0.18
CHMP1A-202ENST00000535997 IGHEP01854 428 aa13.94□□□□□ -0.18
CHMP1A-202ENST00000535997 P04436 131 aa13.94□□□□□ -0.18
CHMP1A-202ENST00000535997 ICAM2P13598 275 aa13.94□□□□□ -0.18
CHMP1A-202ENST00000535997 RPL12P30050 165 aaKnown RBP13.94□□□□□ -0.18
CHMP1A-202ENST00000535997 SRSF3P84103 164 aaKnown RBP13.94□□□□□ -0.18
CHMP1A-202ENST00000535997 TMEM200AQ86VY9 491 aa13.94□□□□□ -0.18
CHMP1A-202ENST00000535997 CMSS1Q9BQ75 279 aaKnown RBP13.94□□□□□ -0.18
CHMP1A-202ENST00000535997 SEC11CQ9BY50 192 aa13.94□□□□□ -0.18
CHMP1A-202ENST00000535997 TLNRD1Q9H1K6 362 aa13.94□□□□□ -0.18
CHMP1A-202ENST00000535997 UQCC1Q9NVA1 299 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms