RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 NLKQ9UBE8 527 aa8.15□□□□□ -1.1
NUP98-220ENST00000533346 AASSQ9UDR5 926 aa8.15□□□□□ -1.1
NUP98-220ENST00000533346 RPUSD1Q9UJJ7 312 aaKnown RBP8.15□□□□□ -1.1
NUP98-220ENST00000533346 HHLA2Q9UM44 414 aa8.15□□□□□ -1.1
NUP98-220ENST00000533346 KPTNQ9Y664 436 aa8.15□□□□□ -1.1
NUP98-220ENST00000533346 IGKV1D-17A0A075B6S4 117 aa8.14□□□□□ -1.11
NUP98-220ENST00000533346 LOC107986453A0A1B0GWG9 222 aa8.14□□□□□ -1.11
NUP98-220ENST00000533346 OR2AT4A6NND4 320 aa8.14□□□□□ -1.11
NUP98-220ENST00000533346 AKR7A2O43488 359 aa8.14□□□□□ -1.11
NUP98-220ENST00000533346 NDUFB3O43676 98 aa8.14□□□□□ -1.11
NUP98-220ENST00000533346 CCDC159P0C7I6 412 aa8.14□□□□□ -1.11
NUP98-220ENST00000533346 PSG2P11465 335 aa8.14□□□□□ -1.11
NUP98-220ENST00000533346 PIPP12273 146 aaPredicted RBP8.14□□□□□ -1.11
NUP98-220ENST00000533346 HAAOP46952 286 aa8.14□□□□□ -1.11
NUP98-220ENST00000533346 ELF3P78545 371 aaPredicted RBP8.14□□□□□ -1.11
NUP98-220ENST00000533346 CNN3Q15417 329 aaKnown RBP8.14□□□□□ -1.11
NUP98-220ENST00000533346 ARMCX4Q5H9R4 360 aa8.14□□□□□ -1.11
NUP98-220ENST00000533346 HAGHLQ6PII5 290 aaPredicted RBP8.14□□□□□ -1.11
NUP98-220ENST00000533346 ACP7Q6ZNF0 438 aa8.14□□□□□ -1.11
NUP98-220ENST00000533346 KCTD8Q6ZWB6 473 aa8.14□□□□□ -1.11
NUP98-220ENST00000533346 BTN2A1Q7KYR7 527 aa8.14□□□□□ -1.11
NUP98-220ENST00000533346 LHFPL3Q86UP9 236 aa8.14□□□□□ -1.11
NUP98-220ENST00000533346 PARP16Q8N5Y8 322 aa8.14□□□□□ -1.11
NUP98-220ENST00000533346 KIR3DL3Q8N743 410 aa8.14□□□□□ -1.11
NUP98-220ENST00000533346 BOLLQ8N9W6 283 aaKnown RBP8.14□□□□□ -1.11
NUP98-220ENST00000533346 TFAP2CQ92754 450 aa8.14□□□□□ -1.11
NUP98-220ENST00000533346 TMIGD2Q96BF3 282 aa8.14□□□□□ -1.11
NUP98-220ENST00000533346 GAFA1Q96PS6 74 aa8.14□□□□□ -1.11
NUP98-220ENST00000533346 CCL13Q99616 98 aa8.14□□□□□ -1.11
NUP98-220ENST00000533346 NRIP2Q9BQI9 281 aa8.14□□□□□ -1.11
NUP98-220ENST00000533346 DCTN5Q9BTE1 182 aa8.14□□□□□ -1.11
NUP98-220ENST00000533346 SIRPDQ9H106 197 aa8.14□□□□□ -1.11
NUP98-220ENST00000533346 CNTD2Q9H8S5 307 aa8.14□□□□□ -1.11
NUP98-220ENST00000533346 UNKLQ9H9P5 680 aaKnown RBP8.14□□□□□ -1.11
NUP98-220ENST00000533346 RHOFQ9HBH0 211 aa8.14□□□□□ -1.11
NUP98-220ENST00000533346 GPR173Q9NS66 373 aa8.14□□□□□ -1.11
NUP98-220ENST00000533346 GTF2A1LQ9UNN4 478 aa8.14□□□□□ -1.11
NUP98-220ENST00000533346 DIMT1Q9UNQ2 313 aaKnown RBP8.14□□□□□ -1.11
NUP98-220ENST00000533346 SLC7A11Q9UPY5 501 aa8.14□□□□□ -1.11
NUP98-220ENST00000533346 CAB39Q9Y376 341 aaPredicted RBP8.14□□□□□ -1.11
NUP98-220ENST00000533346 MAB21L2Q9Y586 359 aa8.14□□□□□ -1.11
NUP98-220ENST00000533346 DSCAML1Q8TD84 2053 aa8.14□□□□□ -1.11
NUP98-220ENST00000533346 IGHV3OR15-7A0A075B7D8 119 aa8.13□□□□□ -1.11
NUP98-220ENST00000533346 TMEM212A6NML5 194 aa8.13□□□□□ -1.11
NUP98-220ENST00000533346 CLDN34H7C241 214 aa8.13□□□□□ -1.11
NUP98-220ENST00000533346 J3QLW9 94 aa8.13□□□□□ -1.11
NUP98-220ENST00000533346 VENTXO95231 258 aa8.13□□□□□ -1.11
NUP98-220ENST00000533346 ZNF19P17023 458 aa8.13□□□□□ -1.11
NUP98-220ENST00000533346 PRKACBP22694 351 aa8.13□□□□□ -1.11
NUP98-220ENST00000533346 CAPGP40121 348 aa8.13□□□□□ -1.11
NUP98-220ENST00000533346 IL13RA1P78552 427 aa8.13□□□□□ -1.11
NUP98-220ENST00000533346 SLC34A1Q06495 639 aa8.13□□□□□ -1.11
NUP98-220ENST00000533346 PDCD1Q15116 288 aa8.13□□□□□ -1.11
NUP98-220ENST00000533346 SMN1Q16637 294 aaKnown RBP8.13□□□□□ -1.11
NUP98-220ENST00000533346 LRRC10Q5BKY1 277 aa8.13□□□□□ -1.11
NUP98-220ENST00000533346 RNLSQ5VYX0 342 aa8.13□□□□□ -1.11
NUP98-220ENST00000533346 ZNF529Q6P280 563 aa8.13□□□□□ -1.11
NUP98-220ENST00000533346 RPL22L1Q6P5R6 122 aaKnown RBP8.13□□□□□ -1.11
NUP98-220ENST00000533346 CALHM1Q8IU99 346 aa8.13□□□□□ -1.11
NUP98-220ENST00000533346 PHC2Q8IXK0 858 aa8.13□□□□□ -1.11
NUP98-220ENST00000533346 ZNF561Q8N587 486 aa8.13□□□□□ -1.11
NUP98-220ENST00000533346 ZNF485Q8NCK3 441 aa8.13□□□□□ -1.11
NUP98-220ENST00000533346 FAM216AQ8WUB2 273 aa8.13□□□□□ -1.11
NUP98-220ENST00000533346 SPSB1Q96BD6 273 aa8.13□□□□□ -1.11
NUP98-220ENST00000533346 SEH1LQ96EE3 360 aa8.13□□□□□ -1.11
NUP98-220ENST00000533346 ADAT3Q96EY9 351 aaPredicted RBP8.13□□□□□ -1.11
NUP98-220ENST00000533346 WDFY2Q96P53 400 aa8.13□□□□□ -1.11
NUP98-220ENST00000533346 FAM234AQ9H0X4 552 aa8.13□□□□□ -1.11
NUP98-220ENST00000533346 ISG20L2Q9H9L3 353 aaKnown RBP8.13□□□□□ -1.11
NUP98-220ENST00000533346 ZMAT3Q9HA38 289 aaKnown RBP8.13□□□□□ -1.11
NUP98-220ENST00000533346 PLEKHA1Q9HB21 404 aa8.13□□□□□ -1.11
NUP98-220ENST00000533346 AMBNQ9NP70 447 aa8.13□□□□□ -1.11
NUP98-220ENST00000533346 CNOT2Q9NZN8 540 aaKnown RBP8.13□□□□□ -1.11
NUP98-220ENST00000533346 DNAJB11Q9UBS4 358 aa8.13□□□□□ -1.11
NUP98-220ENST00000533346 IGKV1-27A0A075B6S5 117 aa8.12□□□□□ -1.11
NUP98-220ENST00000533346 TRBV23-1A0A0A0MS06 115 aa8.12□□□□□ -1.11
NUP98-220ENST00000533346 IGKV1-9A0A0C4DH69 117 aa8.12□□□□□ -1.11
NUP98-220ENST00000533346 NKX6-3A6NJ46 265 aa8.12□□□□□ -1.11
NUP98-220ENST00000533346 RNF212BA8MTL3 300 aa8.12□□□□□ -1.11
NUP98-220ENST00000533346 TRIM77I1YAP6 450 aa8.12□□□□□ -1.11
NUP98-220ENST00000533346 OGG1O15527 345 aa8.12□□□□□ -1.11
NUP98-220ENST00000533346 SYNGR1O43759 233 aa8.12□□□□□ -1.11
NUP98-220ENST00000533346 ZFPL1O95159 310 aa8.12□□□□□ -1.11
NUP98-220ENST00000533346 KNG1P01042 644 aa8.12□□□□□ -1.11
NUP98-220ENST00000533346 CD1AP06126 327 aa8.12□□□□□ -1.11
NUP98-220ENST00000533346 ATF1P18846 271 aa8.12□□□□□ -1.11
NUP98-220ENST00000533346 COMPP49747 757 aaPredicted RBP8.12□□□□□ -1.11
NUP98-220ENST00000533346 RBP2P50120 134 aa8.12□□□□□ -1.11
NUP98-220ENST00000533346 GBX2P52951 348 aaPredicted RBP8.12□□□□□ -1.11
NUP98-220ENST00000533346 ATP1B3P54709 279 aa8.12□□□□□ -1.11
NUP98-220ENST00000533346 FGF12P61328 243 aa8.12□□□□□ -1.11
NUP98-220ENST00000533346 DGUOKQ16854 277 aa8.12□□□□□ -1.11
NUP98-220ENST00000533346 LRRC36Q1X8D7 754 aa8.12□□□□□ -1.11
NUP98-220ENST00000533346 SMIM21Q3B7S5 101 aa8.12□□□□□ -1.11
NUP98-220ENST00000533346 LAIR2Q6ISS4 152 aa8.12□□□□□ -1.11
NUP98-220ENST00000533346 LHFPL2Q6ZUX7 228 aa8.12□□□□□ -1.11
NUP98-220ENST00000533346 ZNF771Q7L3S4 317 aaPredicted RBP8.12□□□□□ -1.11
NUP98-220ENST00000533346 SERPINA12Q8IW75 414 aa8.12□□□□□ -1.11
NUP98-220ENST00000533346 Q8IYB0 196 aa8.12□□□□□ -1.11
NUP98-220ENST00000533346 RDH10Q8IZV5 341 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms