RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 ACTR6Q9GZN1 396 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 NEUROG2Q9H2A3 272 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 ALG9Q9H6U8 611 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 UBE2ZQ9H832 354 aaPredicted RBP2.62□□□□□ -1.99
PTPRK-220ENST00000531466 NIPAL2Q9H841 368 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 NMRAL1Q9HBL8 299 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 B3GNT2Q9NY97 397 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 RASL12Q9NYN1 266 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 BFARQ9NZS9 450 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 RSL24D1Q9UHA3 163 aaKnown RBP2.62□□□□□ -1.99
PTPRK-220ENST00000531466 SAMD4AQ9UPU9 718 aaKnown RBP2.62□□□□□ -1.99
PTPRK-220ENST00000531466 SNX24Q9Y343 169 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 FBXO7Q9Y3I1 522 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 CAMSAP2Q08AD1 1489 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 KTN1Q86UP2 1357 aaKnown RBP2.61□□□□□ -1.99
PTPRK-220ENST00000531466 PTPRUQ92729 1446 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 YTHDC2Q9H6S0 1430 aaKnown RBP2.61□□□□□ -1.99
PTPRK-220ENST00000531466 CCDC141Q6ZP82 1450 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 A0A1W2PPV9 198 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 LRP5LA4QPB2 252 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 SMIM9A6NGZ8 99 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 EPOPA6NHQ4 379 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 CLDN24A6NM45 220 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 ANKRD63C9JTQ0 380 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 EI24O14681 340 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 FGF16O43320 207 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 ERI3O43414 337 aaKnown RBP2.61□□□□□ -1.99
PTPRK-220ENST00000531466 RAD51CO43502 376 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 PRKAB2O43741 272 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 EIF3GO75821 320 aaKnown RBP eCLIP2.61□□□□□ -1.99
PTPRK-220ENST00000531466 STK17BO94768 372 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 ATG12O94817 140 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 PTTG1O95997 202 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 IGHG3P01860 377 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 HTR1AP08908 422 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 OR8U8P0C7N1 319 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 GABRA1P14867 456 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 UGT2B7P16662 529 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 ZNF25P17030 456 aaPredicted RBP2.61□□□□□ -1.99
PTPRK-220ENST00000531466 PGCP20142 388 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 OMGP23515 440 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 CXCR1P25024 350 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 GJB2P29033 226 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 S100A11P31949 105 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 GGT2P36268 569 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 DDOSTP39656 456 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 CD200P41217 278 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 GNPDA1P46926 289 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 OR3A4PP47883 348 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 P2RY1P47900 373 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 STC1P52823 247 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 BACE1P56817 501 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 NCALDP61601 193 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 PKIAP61925 76 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 RAP1AP62834 184 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 GNG3P63215 75 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 MRPS6P82932 125 aaKnown RBP2.61□□□□□ -1.99
PTPRK-220ENST00000531466 PRKCDQ05655 676 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 BCL2L1Q07817 233 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 ZNF616Q08AN1 781 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 C1orf61Q13536 156 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 ZNF235Q14590 738 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 ZNF77Q15935 545 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 TAF9Q16594 264 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 HIST3H3Q16695 136 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 TRMT5Q32P41 509 aaKnown RBP2.61□□□□□ -1.99
PTPRK-220ENST00000531466 ZNF528Q3MIS6 628 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 LY6G6FQ5SQ64 297 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 GPRC6AQ5T6X5 926 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 REP15Q6BDI9 236 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 WDR74Q6RFH5 385 aaPredicted RBP2.61□□□□□ -1.99
PTPRK-220ENST00000531466 LINC00336Q6ZUF6 198 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 LRRC25Q8N386 305 aaPredicted RBP2.61□□□□□ -1.99
PTPRK-220ENST00000531466 CADM2Q8N3J6 435 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 EIF4E3Q8N5X7 224 aaKnown RBP2.61□□□□□ -1.99
PTPRK-220ENST00000531466 GVQW1Q8N7I0 195 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 ACOT4Q8N9L9 421 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 SLC26A10Q8NG04 563 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 OR8U1Q8NH10 309 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 OR5B3Q8NH48 314 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 OR2AE1Q8NHA4 323 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 TERB2Q8NHR7 220 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 LYPD6BQ8NI32 183 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 SFXN5Q8TD22 340 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 SFT2D1Q8WV19 159 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 TRUB1Q8WWH5 349 aaKnown RBP2.61□□□□□ -1.99
PTPRK-220ENST00000531466 BAALCQ8WXS3 180 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 TIMD4Q96H15 378 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 NARS2Q96I59 477 aaKnown RBP2.61□□□□□ -1.99
PTPRK-220ENST00000531466 CLCC1Q96S66 551 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 CPXM1Q96SM3 734 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 ARHGDIGQ99819 225 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 AGPAT1Q99943 283 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 CCDC32Q9BV29 185 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 NAA50Q9GZZ1 169 aaKnown RBP2.61□□□□□ -1.99
PTPRK-220ENST00000531466 RHOJQ9H4E5 214 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 SIAEQ9HAT2 523 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 RDH14Q9HBH5 336 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 CYTL1Q9NRR1 136 aa2.61□□□□□ -1.99
PTPRK-220ENST00000531466 MCUBQ9NWR8 336 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms