RNA–Protein interactions for RNA: ENST00000530790.5

VPS28-211, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-211ENST00000530790 A0A0U1RQK1 487 aa10.95□□□□□ -0.66
VPS28-211ENST00000530790 PQLC2LA1A4F0 135 aa10.95□□□□□ -0.66
VPS28-211ENST00000530790 A6NIN4 97 aa10.95□□□□□ -0.66
VPS28-211ENST00000530790 SYNGR1O43759 233 aa10.95□□□□□ -0.66
VPS28-211ENST00000530790 NXPH2O95156 264 aa10.95□□□□□ -0.66
VPS28-211ENST00000530790 PGA5P0DJD9 388 aa10.95□□□□□ -0.66
VPS28-211ENST00000530790 EEF1B2P24534 225 aaKnown RBP10.95□□□□□ -0.66
VPS28-211ENST00000530790 CAPZA1P52907 286 aa10.95□□□□□ -0.66
VPS28-211ENST00000530790 BLMHQ13867 455 aa10.95□□□□□ -0.66
VPS28-211ENST00000530790 METAP1DQ6UB28 335 aaPredicted RBP10.95□□□□□ -0.66
VPS28-211ENST00000530790 ACP7Q6ZNF0 438 aa10.95□□□□□ -0.66
VPS28-211ENST00000530790 Q6ZSR3 168 aa10.95□□□□□ -0.66
VPS28-211ENST00000530790 C10orf67Q8IYJ2 551 aa10.95□□□□□ -0.66
VPS28-211ENST00000530790 ZNRF1Q8ND25 227 aa10.95□□□□□ -0.66
VPS28-211ENST00000530790 CCDC54Q8NEL0 328 aa10.95□□□□□ -0.66
VPS28-211ENST00000530790 SGMS2Q8NHU3 365 aa10.95□□□□□ -0.66
VPS28-211ENST00000530790 RORBQ92753 470 aa10.95□□□□□ -0.66
VPS28-211ENST00000530790 SDSLQ96GA7 329 aa10.95□□□□□ -0.66
VPS28-211ENST00000530790 HRASLS5Q96KN8 279 aa10.95□□□□□ -0.66
VPS28-211ENST00000530790 ADI1Q9BV57 179 aa10.95□□□□□ -0.66
VPS28-211ENST00000530790 ZNF747Q9BV97 191 aa10.95□□□□□ -0.66
VPS28-211ENST00000530790 UNKLQ9H9P5 680 aaKnown RBP10.95□□□□□ -0.66
VPS28-211ENST00000530790 ELL3Q9HB65 397 aaPredicted RBP10.95□□□□□ -0.66
VPS28-211ENST00000530790 SLC7A11Q9UPY5 501 aa10.95□□□□□ -0.66
VPS28-211ENST00000530790 CAB39Q9Y376 341 aaPredicted RBP10.95□□□□□ -0.66
VPS28-211ENST00000530790 FAM96BQ9Y3D0 163 aa10.95□□□□□ -0.66
VPS28-211ENST00000530790 LOC107986453A0A1B0GWG9 222 aa10.94□□□□□ -0.66
VPS28-211ENST00000530790 FAM181BA6NEQ2 426 aa10.94□□□□□ -0.66
VPS28-211ENST00000530790 H3BSH0 61 aa10.94□□□□□ -0.66
VPS28-211ENST00000530790 M0R1W7 72 aa10.94□□□□□ -0.66
VPS28-211ENST00000530790 SLC1A7O00341 560 aa10.94□□□□□ -0.66
VPS28-211ENST00000530790 NOS1APO75052 506 aaPredicted RBP10.94□□□□□ -0.66
VPS28-211ENST00000530790 GATBO75879 557 aaKnown RBP10.94□□□□□ -0.66
VPS28-211ENST00000530790 CRYBA1P05813 215 aa10.94□□□□□ -0.66
VPS28-211ENST00000530790 UBCP0CG48 685 aaKnown RBP10.94□□□□□ -0.66
VPS28-211ENST00000530790 ZIK1Q3SY52 487 aaPredicted RBP10.94□□□□□ -0.66
VPS28-211ENST00000530790 TP53I3Q53FA7 332 aa10.94□□□□□ -0.66
VPS28-211ENST00000530790 MEDAGQ5VYS4 303 aa10.94□□□□□ -0.66
VPS28-211ENST00000530790 NCR3LG1Q68D85 454 aa10.94□□□□□ -0.66
VPS28-211ENST00000530790 FIP1L1Q6UN15 594 aaKnown RBP10.94□□□□□ -0.66
VPS28-211ENST00000530790 SHISA2Q6UWI4 295 aa10.94□□□□□ -0.66
VPS28-211ENST00000530790 FAM185AQ8N0U4 392 aa10.94□□□□□ -0.66
VPS28-211ENST00000530790 CBR4Q8N4T8 237 aa10.94□□□□□ -0.66
VPS28-211ENST00000530790 TRMT10AQ8TBZ6 339 aaKnown RBP10.94□□□□□ -0.66
VPS28-211ENST00000530790 TBC1D15Q8TC07 691 aa10.94□□□□□ -0.66
VPS28-211ENST00000530790 NPRL2Q8WTW4 380 aa10.94□□□□□ -0.66
VPS28-211ENST00000530790 RNFT2Q96EX2 444 aa10.94□□□□□ -0.66
VPS28-211ENST00000530790 ZNF488Q96MN9 340 aa10.94□□□□□ -0.66
VPS28-211ENST00000530790 NRIP2Q9BQI9 281 aa10.94□□□□□ -0.66
VPS28-211ENST00000530790 CHIAQ9BZP6 476 aa10.94□□□□□ -0.66
VPS28-211ENST00000530790 PKIBQ9C010 78 aa10.94□□□□□ -0.66
VPS28-211ENST00000530790 METTL8Q9H825 291 aaKnown RBP10.94□□□□□ -0.66
VPS28-211ENST00000530790 MAB21L2Q9Y586 359 aa10.94□□□□□ -0.66
VPS28-211ENST00000530790 FAM230AA0A1W2PPH8 454 aa10.93□□□□□ -0.66
VPS28-211ENST00000530790 RFPL4AA6NLU0 287 aa10.93□□□□□ -0.66
VPS28-211ENST00000530790 SNTNA6NMZ2 147 aa10.93□□□□□ -0.66
VPS28-211ENST00000530790 RFPL4AL1F8VTS6 287 aa10.93□□□□□ -0.66
VPS28-211ENST00000530790 RNASEK-C17orf49H0YIS7 233 aa10.93□□□□□ -0.66
VPS28-211ENST00000530790 ENTPD6O75354 484 aa10.93□□□□□ -0.66
VPS28-211ENST00000530790 FBP1P09467 338 aa10.93□□□□□ -0.66
VPS28-211ENST00000530790 MDKP21741 143 aaPredicted RBP10.93□□□□□ -0.66
VPS28-211ENST00000530790 MPZP25189 248 aa10.93□□□□□ -0.66
VPS28-211ENST00000530790 ISL1P61371 349 aa10.93□□□□□ -0.66
VPS28-211ENST00000530790 SNRPGP62308 76 aaKnown RBP10.93□□□□□ -0.66
VPS28-211ENST00000530790 ZNF85Q03923 595 aa10.93□□□□□ -0.66
VPS28-211ENST00000530790 KLRD1Q13241 179 aa10.93□□□□□ -0.66
VPS28-211ENST00000530790 SLC25A30Q5SVS4 291 aa10.93□□□□□ -0.66
VPS28-211ENST00000530790 LDLRAD3Q86YD5 345 aa10.93□□□□□ -0.66
VPS28-211ENST00000530790 PRSS35Q8N3Z0 413 aa10.93□□□□□ -0.66
VPS28-211ENST00000530790 PIP4P2Q8N4L2 257 aa10.93□□□□□ -0.66
VPS28-211ENST00000530790 ZNF561Q8N587 486 aa10.93□□□□□ -0.66
VPS28-211ENST00000530790 Q8N7P7 452 aa10.93□□□□□ -0.66
VPS28-211ENST00000530790 TAF15Q92804 592 aaKnown RBP eCLIP10.93□□□□□ -0.66
VPS28-211ENST00000530790 C9orf16Q9BUW7 83 aa10.93□□□□□ -0.66
VPS28-211ENST00000530790 CHST5Q9GZS9 411 aa10.93□□□□□ -0.66
VPS28-211ENST00000530790 NBEAL1Q6ZS30 2694 aa10.93□□□□□ -0.66
VPS28-211ENST00000530790 A0A1W2PPH5 198 aa10.92□□□□□ -0.66
VPS28-211ENST00000530790 DAPL1A0PJW8 107 aa10.92□□□□□ -0.66
VPS28-211ENST00000530790 BTBD17A6NE02 478 aa10.92□□□□□ -0.66
VPS28-211ENST00000530790 POM121CA8CG34 1229 aa10.92□□□□□ -0.66
VPS28-211ENST00000530790 EBAG9O00559 213 aa10.92□□□□□ -0.66
VPS28-211ENST00000530790 NPFFO15130 113 aa10.92□□□□□ -0.66
VPS28-211ENST00000530790 PAHP00439 452 aa10.92□□□□□ -0.66
VPS28-211ENST00000530790 SERPINA3P01011 423 aa10.92□□□□□ -0.66
VPS28-211ENST00000530790 IGHV4-59P01825 116 aa10.92□□□□□ -0.66
VPS28-211ENST00000530790 OMGP23515 440 aa10.92□□□□□ -0.66
VPS28-211ENST00000530790 PRDX2P32119 198 aa10.92□□□□□ -0.66
VPS28-211ENST00000530790 KIR3DL2P43630 455 aa10.92□□□□□ -0.66
VPS28-211ENST00000530790 RAG2P55895 527 aa10.92□□□□□ -0.66
VPS28-211ENST00000530790 DLX1P56177 255 aa10.92□□□□□ -0.66
VPS28-211ENST00000530790 RPL15P61313 204 aaKnown RBP10.92□□□□□ -0.66
VPS28-211ENST00000530790 ACTA2P62736 377 aa10.92□□□□□ -0.66
VPS28-211ENST00000530790 ACTG2P63267 376 aa10.92□□□□□ -0.66
VPS28-211ENST00000530790 PRB3Q04118 309 aaPredicted RBP10.92□□□□□ -0.66
VPS28-211ENST00000530790 IL24Q13007 206 aa10.92□□□□□ -0.66
VPS28-211ENST00000530790 CNN3Q15417 329 aaKnown RBP10.92□□□□□ -0.66
VPS28-211ENST00000530790 OCLNQ16625 522 aa10.92□□□□□ -0.66
VPS28-211ENST00000530790 C1orf122Q6ZSJ8 110 aa10.92□□□□□ -0.66
VPS28-211ENST00000530790 KCTD20Q7Z5Y7 419 aa10.92□□□□□ -0.66
VPS28-211ENST00000530790 ANGPTL5Q86XS5 388 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms