RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 SLC25A32Q9H2D1 315 aa10.91□□□□□ -0.66
SCN3B-206ENST00000530277 BIN3Q9NQY0 253 aa10.91□□□□□ -0.66
SCN3B-206ENST00000530277 NPIPB9F8W1W9 429 aa10.9□□□□□ -0.66
SCN3B-206ENST00000530277 GEMIN2O14893 280 aaKnown RBP10.9□□□□□ -0.66
SCN3B-206ENST00000530277 DXOO77932 396 aaKnown RBP10.9□□□□□ -0.66
SCN3B-206ENST00000530277 SNAPINO95295 136 aa10.9□□□□□ -0.66
SCN3B-206ENST00000530277 RAG2P55895 527 aa10.9□□□□□ -0.66
SCN3B-206ENST00000530277 ARF1P84077 181 aaKnown RBP10.9□□□□□ -0.66
SCN3B-206ENST00000530277 PLAURQ03405 335 aa10.9□□□□□ -0.66
SCN3B-206ENST00000530277 GGTLC2Q14390 218 aa10.9□□□□□ -0.66
SCN3B-206ENST00000530277 PABPC1L2AQ5JQF8 200 aa10.9□□□□□ -0.66
SCN3B-206ENST00000530277 SLC16A13Q7RTY0 426 aa10.9□□□□□ -0.66
SCN3B-206ENST00000530277 SUMF2Q8NBJ7 301 aa10.9□□□□□ -0.66
SCN3B-206ENST00000530277 OR10Z1Q8NGY1 313 aa10.9□□□□□ -0.66
SCN3B-206ENST00000530277 CPNE4Q96A23 557 aaPredicted RBP10.9□□□□□ -0.66
SCN3B-206ENST00000530277 AKR1E2Q96JD6 320 aa10.9□□□□□ -0.66
SCN3B-206ENST00000530277 TWSG1Q9GZX9 223 aa10.9□□□□□ -0.66
SCN3B-206ENST00000530277 NELFAQ9H3P2 528 aa10.9□□□□□ -0.66
SCN3B-206ENST00000530277 SPACA1Q9HBV2 294 aa10.9□□□□□ -0.66
SCN3B-206ENST00000530277 KCNIP1Q9NZI2 227 aa10.9□□□□□ -0.66
SCN3B-206ENST00000530277 BPTFQ12830 3046 aa10.9□□□□□ -0.66
SCN3B-206ENST00000530277 FTCDNL1E5RQL4 147 aa10.9□□□□□ -0.66
SCN3B-206ENST00000530277 BCL2L11O43521 198 aa10.9□□□□□ -0.66
SCN3B-206ENST00000530277 ICAM2P13598 275 aa10.9□□□□□ -0.66
SCN3B-206ENST00000530277 CLN3Q13286 438 aa10.9□□□□□ -0.66
SCN3B-206ENST00000530277 ACTBL2Q562R1 376 aa10.9□□□□□ -0.66
SCN3B-206ENST00000530277 SSX9Q7RTT3 188 aa10.9□□□□□ -0.66
SCN3B-206ENST00000530277 FAM181AQ8N9Y4 354 aa10.9□□□□□ -0.66
SCN3B-206ENST00000530277 ZSCAN4Q8NAM6 433 aaPredicted RBP10.9□□□□□ -0.66
SCN3B-206ENST00000530277 DEFB108BQ8NET1 73 aa10.9□□□□□ -0.66
SCN3B-206ENST00000530277 OR5M8Q8NGP6 311 aa10.9□□□□□ -0.66
SCN3B-206ENST00000530277 OR14K1Q8NGZ2 314 aa10.9□□□□□ -0.66
SCN3B-206ENST00000530277 RNF133Q8WVZ7 376 aa10.9□□□□□ -0.66
SCN3B-206ENST00000530277 NMNAT2Q9BZQ4 307 aa10.9□□□□□ -0.66
SCN3B-206ENST00000530277 TIMM10BQ9Y5J6 103 aa10.9□□□□□ -0.66
SCN3B-206ENST00000530277 ZNF732B4DXR9 585 aa10.9□□□□□ -0.67
SCN3B-206ENST00000530277 VAMP5O95183 116 aa10.9□□□□□ -0.67
SCN3B-206ENST00000530277 IGKV3-11P04433 115 aa10.9□□□□□ -0.67
SCN3B-206ENST00000530277 OR2T2Q6IF00 324 aa10.9□□□□□ -0.67
SCN3B-206ENST00000530277 LCN15Q6UWW0 184 aa10.9□□□□□ -0.67
SCN3B-206ENST00000530277 A0A0J9YW62 118 aa10.89□□□□□ -0.67
SCN3B-206ENST00000530277 MSTNO14793 375 aa10.89□□□□□ -0.67
SCN3B-206ENST00000530277 KMT5CQ86Y97 462 aa10.89□□□□□ -0.67
SCN3B-206ENST00000530277 OR2G3Q8NGZ4 309 aa10.89□□□□□ -0.67
SCN3B-206ENST00000530277 OR1F12Q8NHA8 337 aa10.89□□□□□ -0.67
SCN3B-206ENST00000530277 RFESDQ8TAC1 157 aa10.89□□□□□ -0.67
SCN3B-206ENST00000530277 GFI1Q99684 422 aa10.89□□□□□ -0.67
SCN3B-206ENST00000530277 PBDC1Q9BVG4 233 aa10.89□□□□□ -0.67
SCN3B-206ENST00000530277 FAM212BQ9NTI7 297 aaPredicted RBP10.89□□□□□ -0.67
SCN3B-206ENST00000530277 ST8SIA3O43173 380 aa10.89□□□□□ -0.67
SCN3B-206ENST00000530277 CLDN1O95832 211 aa10.89□□□□□ -0.67
SCN3B-206ENST00000530277 TXNDC12O95881 172 aa10.89□□□□□ -0.67
SCN3B-206ENST00000530277 RCC1P18754 421 aaPredicted RBP10.89□□□□□ -0.67
SCN3B-206ENST00000530277 PTAFRP25105 342 aa10.89□□□□□ -0.67
SCN3B-206ENST00000530277 RTN4RL2Q86UN3 420 aa10.89□□□□□ -0.67
SCN3B-206ENST00000530277 C17orf78Q8N4C9 275 aa10.89□□□□□ -0.67
SCN3B-206ENST00000530277 SPICQ8N5J4 248 aa10.89□□□□□ -0.67
SCN3B-206ENST00000530277 ZNF426Q9BUY5 554 aa10.89□□□□□ -0.67
SCN3B-206ENST00000530277 CTDSPLO15194 276 aa10.89□□□□□ -0.67
SCN3B-206ENST00000530277 TNFSF15O95150 251 aa10.89□□□□□ -0.67
SCN3B-206ENST00000530277 NMBP08949 121 aa10.89□□□□□ -0.67
SCN3B-206ENST00000530277 OR5AC1P0C628 307 aa10.89□□□□□ -0.67
SCN3B-206ENST00000530277 RAC2P15153 192 aa10.89□□□□□ -0.67
SCN3B-206ENST00000530277 NKX2-1P43699 371 aaPredicted RBP10.89□□□□□ -0.67
SCN3B-206ENST00000530277 RAB1AP62820 205 aa10.89□□□□□ -0.67
SCN3B-206ENST00000530277 SOHLH1Q5JUK2 328 aa10.89□□□□□ -0.67
SCN3B-206ENST00000530277 ZNF468Q5VIY5 522 aaPredicted RBP10.89□□□□□ -0.67
SCN3B-206ENST00000530277 CDCP2Q5VXM1 449 aa10.89□□□□□ -0.67
SCN3B-206ENST00000530277 OR52H1Q8NGJ2 320 aa10.89□□□□□ -0.67
SCN3B-206ENST00000530277 FBXO17Q96EF6 278 aa10.89□□□□□ -0.67
SCN3B-206ENST00000530277 OCSTAMPQ9BR26 566 aa10.89□□□□□ -0.67
SCN3B-206ENST00000530277 DHRS3O75911 302 aa10.88□□□□□ -0.67
SCN3B-206ENST00000530277 EDDM3BP56851 147 aa10.88□□□□□ -0.67
SCN3B-206ENST00000530277 CFHR1Q03591 330 aa10.88□□□□□ -0.67
SCN3B-206ENST00000530277 PLPPR5Q32ZL2 321 aa10.88□□□□□ -0.67
SCN3B-206ENST00000530277 FIP1L1Q6UN15 594 aaKnown RBP10.88□□□□□ -0.67
SCN3B-206ENST00000530277 GLRX5Q86SX6 157 aa10.88□□□□□ -0.67
SCN3B-206ENST00000530277 LGI3Q8N145 548 aa10.88□□□□□ -0.67
SCN3B-206ENST00000530277 OSR2Q8N2R0 312 aa10.88□□□□□ -0.67
SCN3B-206ENST00000530277 PLPP5Q8NEB5 264 aa10.88□□□□□ -0.67
SCN3B-206ENST00000530277 ZNF524Q96C55 264 aa10.88□□□□□ -0.67
SCN3B-206ENST00000530277 ZNF488Q96MN9 340 aa10.88□□□□□ -0.67
SCN3B-206ENST00000530277 GPR137Q96N19 417 aa10.88□□□□□ -0.67
SCN3B-206ENST00000530277 TRBV5-5A0A0J9YX44 114 aa10.88□□□□□ -0.67
SCN3B-206ENST00000530277 A0A1W2PR77 199 aa10.88□□□□□ -0.67
SCN3B-206ENST00000530277 SULT1C2O00338 296 aa10.88□□□□□ -0.67
SCN3B-206ENST00000530277 GSTP1P09211 210 aaKnown RBP10.88□□□□□ -0.67
SCN3B-206ENST00000530277 BMP5P22003 454 aa10.88□□□□□ -0.67
SCN3B-206ENST00000530277 MMP16P51512 607 aa10.88□□□□□ -0.67
SCN3B-206ENST00000530277 DSCR4P56555 118 aaPredicted RBP10.88□□□□□ -0.67
SCN3B-206ENST00000530277 LPCAT3Q6P1A2 487 aa10.88□□□□□ -0.67
SCN3B-206ENST00000530277 ZNF837Q96EG3 531 aaPredicted RBP10.88□□□□□ -0.67
SCN3B-206ENST00000530277 C2orf50Q96LR7 162 aa10.88□□□□□ -0.67
SCN3B-206ENST00000530277 SPIN2AQ99865 258 aa10.88□□□□□ -0.67
SCN3B-206ENST00000530277 SPIN2BQ9BPZ2 258 aa10.88□□□□□ -0.67
SCN3B-206ENST00000530277 PIGMQ9H3S5 423 aa10.88□□□□□ -0.67
SCN3B-206ENST00000530277 SPANXN5Q5MJ07 72 aa10.88□□□□□ -0.67
SCN3B-206ENST00000530277 C1QL2Q7Z5L3 287 aa10.88□□□□□ -0.67
SCN3B-206ENST00000530277 APCDD1LQ8NCL9 501 aa10.88□□□□□ -0.67
SCN3B-206ENST00000530277 OR2M3Q8NG83 312 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms