RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 TEX29Q8N6K0 151 aa10.54□□□□□ -0.72
CCDC90B-216ENST00000529856 OR5T2Q8NGG2 359 aa10.54□□□□□ -0.72
CCDC90B-216ENST00000529856 OR51A4Q8NGJ6 313 aa10.54□□□□□ -0.72
CCDC90B-216ENST00000529856 OR52N1Q8NH53 320 aa10.54□□□□□ -0.72
CCDC90B-216ENST00000529856 OR5AK2Q8NH90 309 aa10.54□□□□□ -0.72
CCDC90B-216ENST00000529856 TRMT10AQ8TBZ6 339 aaKnown RBP10.54□□□□□ -0.72
CCDC90B-216ENST00000529856 RPS4Y2Q8TD47 263 aa10.54□□□□□ -0.72
CCDC90B-216ENST00000529856 RAB40AQ8WXH6 277 aa10.54□□□□□ -0.72
CCDC90B-216ENST00000529856 TMIGD2Q96BF3 282 aa10.54□□□□□ -0.72
CCDC90B-216ENST00000529856 CCL13Q99616 98 aa10.54□□□□□ -0.72
CCDC90B-216ENST00000529856 PDCD1LG2Q9BQ51 273 aa10.54□□□□□ -0.72
CCDC90B-216ENST00000529856 COMMD4Q9H0A8 199 aa10.54□□□□□ -0.72
CCDC90B-216ENST00000529856 RASSF4Q9H2L5 321 aa10.54□□□□□ -0.72
CCDC90B-216ENST00000529856 SNTG1Q9NSN8 517 aa10.54□□□□□ -0.72
CCDC90B-216ENST00000529856 FKBP14Q9NWM8 211 aa10.54□□□□□ -0.72
CCDC90B-216ENST00000529856 RASL12Q9NYN1 266 aa10.54□□□□□ -0.72
CCDC90B-216ENST00000529856 MXRA5Q9NR99 2828 aa10.54□□□□□ -0.72
CCDC90B-216ENST00000529856 IGKV1-27A0A075B6S5 117 aa10.53□□□□□ -0.72
CCDC90B-216ENST00000529856 LOC105371242A0A075B767 164 aa10.53□□□□□ -0.72
CCDC90B-216ENST00000529856 IGHV2-70DA0A0C4DH43 119 aa10.53□□□□□ -0.72
CCDC90B-216ENST00000529856 IGKV1-9A0A0C4DH69 117 aa10.53□□□□□ -0.72
CCDC90B-216ENST00000529856 KIR2DS1A0A191URI9 304 aa10.53□□□□□ -0.72
CCDC90B-216ENST00000529856 DVL1O14640 695 aa10.53□□□□□ -0.72
CCDC90B-216ENST00000529856 TMPRSS2O15393 492 aa10.53□□□□□ -0.72
CCDC90B-216ENST00000529856 OGG1O15527 345 aa10.53□□□□□ -0.72
CCDC90B-216ENST00000529856 SYNGR1O43759 233 aa10.53□□□□□ -0.72
CCDC90B-216ENST00000529856 NOS1APO75052 506 aaPredicted RBP10.53□□□□□ -0.72
CCDC90B-216ENST00000529856 FCN3O75636 299 aa10.53□□□□□ -0.72
CCDC90B-216ENST00000529856 ACAA1P09110 424 aaPredicted RBP10.53□□□□□ -0.72
CCDC90B-216ENST00000529856 PGA5P0DJD9 388 aa10.53□□□□□ -0.72
CCDC90B-216ENST00000529856 ATF1P18846 271 aa10.53□□□□□ -0.72
CCDC90B-216ENST00000529856 MPZP25189 248 aa10.53□□□□□ -0.72
CCDC90B-216ENST00000529856 CDK5R1Q15078 307 aa10.53□□□□□ -0.72
CCDC90B-216ENST00000529856 CD276Q5ZPR3 534 aa10.53□□□□□ -0.72
CCDC90B-216ENST00000529856 XAF1Q6GPH4 301 aa10.53□□□□□ -0.72
CCDC90B-216ENST00000529856 ZNF788Q6ZQV5 615 aa10.53□□□□□ -0.72
CCDC90B-216ENST00000529856 AHSA2Q719I0 299 aa10.53□□□□□ -0.72
CCDC90B-216ENST00000529856 SLC36A1Q7Z2H8 476 aa10.53□□□□□ -0.72
CCDC90B-216ENST00000529856 ANGPTL5Q86XS5 388 aa10.53□□□□□ -0.72
CCDC90B-216ENST00000529856 STX19Q8N4C7 294 aa10.53□□□□□ -0.72
CCDC90B-216ENST00000529856 POC1AQ8NBT0 407 aa10.53□□□□□ -0.72
CCDC90B-216ENST00000529856 ZNF485Q8NCK3 441 aa10.53□□□□□ -0.72
CCDC90B-216ENST00000529856 DNAAF1Q8NEP3 725 aa10.53□□□□□ -0.72
CCDC90B-216ENST00000529856 OR13C3Q8NGS6 347 aa10.53□□□□□ -0.72
CCDC90B-216ENST00000529856 ANGPTL6Q8NI99 470 aa10.53□□□□□ -0.72
CCDC90B-216ENST00000529856 NPRL2Q8WTW4 380 aa10.53□□□□□ -0.72
CCDC90B-216ENST00000529856 GATAD2BQ8WXI9 593 aa10.53□□□□□ -0.72
CCDC90B-216ENST00000529856 PKIBQ9C010 78 aa10.53□□□□□ -0.72
CCDC90B-216ENST00000529856 DNTTIP1Q9H147 329 aa10.53□□□□□ -0.72
CCDC90B-216ENST00000529856 SMURF1Q9HCE7 757 aa10.53□□□□□ -0.72
CCDC90B-216ENST00000529856 NLKQ9UBE8 527 aa10.53□□□□□ -0.72
CCDC90B-216ENST00000529856 POLDIP2Q9Y2S7 368 aa10.53□□□□□ -0.72
CCDC90B-216ENST00000529856 AUP1Q9Y679 476 aa10.53□□□□□ -0.72
CCDC90B-216ENST00000529856 SIRT4Q9Y6E7 314 aaPredicted RBP10.53□□□□□ -0.72
CCDC90B-216ENST00000529856 A0A1B0GW55 424 aa10.52□□□□□ -0.73
CCDC90B-216ENST00000529856 OR2AT4A6NND4 320 aa10.52□□□□□ -0.73
CCDC90B-216ENST00000529856 C22orf46C9J442 243 aa10.52□□□□□ -0.73
CCDC90B-216ENST00000529856 LALBAP00709 142 aa10.52□□□□□ -0.73
CCDC90B-216ENST00000529856 DUX4L2P0CJ85 424 aa10.52□□□□□ -0.73
CCDC90B-216ENST00000529856 DUX4L3P0CJ86 424 aa10.52□□□□□ -0.73
CCDC90B-216ENST00000529856 DUX4L4P0CJ87 422 aa10.52□□□□□ -0.73
CCDC90B-216ENST00000529856 DUX4L5P0CJ88 424 aa10.52□□□□□ -0.73
CCDC90B-216ENST00000529856 DUX4L6P0CJ89 424 aa10.52□□□□□ -0.73
CCDC90B-216ENST00000529856 DUX4L7P0CJ90 424 aa10.52□□□□□ -0.73
CCDC90B-216ENST00000529856 PRKACBP22694 351 aa10.52□□□□□ -0.73
CCDC90B-216ENST00000529856 MYF6P23409 242 aa10.52□□□□□ -0.73
CCDC90B-216ENST00000529856 C21orf33P30042 268 aaPredicted RBP10.52□□□□□ -0.73
CCDC90B-216ENST00000529856 RBP2P50120 134 aa10.52□□□□□ -0.73
CCDC90B-216ENST00000529856 IL24Q13007 206 aa10.52□□□□□ -0.73
CCDC90B-216ENST00000529856 CNN3Q15417 329 aaKnown RBP10.52□□□□□ -0.73
CCDC90B-216ENST00000529856 C11orf91Q3C1V1 193 aa10.52□□□□□ -0.73
CCDC90B-216ENST00000529856 DUX4L9Q6RFH8 374 aaPredicted RBP10.52□□□□□ -0.73
CCDC90B-216ENST00000529856 BTNL3Q6UXE8 466 aa10.52□□□□□ -0.73
CCDC90B-216ENST00000529856 IZUMO2Q6UXV1 221 aa10.52□□□□□ -0.73
CCDC90B-216ENST00000529856 ACP7Q6ZNF0 438 aa10.52□□□□□ -0.73
CCDC90B-216ENST00000529856 C1QL2Q7Z5L3 287 aa10.52□□□□□ -0.73
CCDC90B-216ENST00000529856 BORCS8Q96FH0 119 aa10.52□□□□□ -0.73
CCDC90B-216ENST00000529856 ZNF488Q96MN9 340 aa10.52□□□□□ -0.73
CCDC90B-216ENST00000529856 NRIP2Q9BQI9 281 aa10.52□□□□□ -0.73
CCDC90B-216ENST00000529856 NUDT16L1Q9BRJ7 211 aaKnown RBP10.52□□□□□ -0.73
CCDC90B-216ENST00000529856 MRI1Q9BV20 369 aa10.52□□□□□ -0.73
CCDC90B-216ENST00000529856 ANKRD60Q9BZ19 345 aa10.52□□□□□ -0.73
CCDC90B-216ENST00000529856 ZCCHC4Q9H5U6 513 aa10.52□□□□□ -0.73
CCDC90B-216ENST00000529856 DUX4Q9UBX2 424 aa10.52□□□□□ -0.73
CCDC90B-216ENST00000529856 IGKV1D-17A0A075B6S4 117 aa10.51□□□□□ -0.73
CCDC90B-216ENST00000529856 SLC1A7O00341 560 aa10.51□□□□□ -0.73
CCDC90B-216ENST00000529856 NDUFB3O43676 98 aa10.51□□□□□ -0.73
CCDC90B-216ENST00000529856 ALX3O95076 343 aa10.51□□□□□ -0.73
CCDC90B-216ENST00000529856 ECDO95905 644 aaPredicted RBP10.51□□□□□ -0.73
CCDC90B-216ENST00000529856 FSHBP01225 129 aa10.51□□□□□ -0.73
CCDC90B-216ENST00000529856 MT-ND2P03891 347 aa10.51□□□□□ -0.73
CCDC90B-216ENST00000529856 PSG2P11465 335 aa10.51□□□□□ -0.73
CCDC90B-216ENST00000529856 ADRA2CP18825 462 aa10.51□□□□□ -0.73
CCDC90B-216ENST00000529856 AZGP1P25311 298 aaKnown RBP10.51□□□□□ -0.73
CCDC90B-216ENST00000529856 HSPA13P48723 471 aa10.51□□□□□ -0.73
CCDC90B-216ENST00000529856 ATP1B3P54709 279 aa10.51□□□□□ -0.73
CCDC90B-216ENST00000529856 MTCP1P56278 107 aa10.51□□□□□ -0.73
CCDC90B-216ENST00000529856 ERVK11-1P61568 191 aa10.51□□□□□ -0.73
CCDC90B-216ENST00000529856 SMIM21Q3B7S5 101 aa10.51□□□□□ -0.73
CCDC90B-216ENST00000529856 RNLSQ5VYX0 342 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms