RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 KRTAP10-3P60369 221 aa8.55□□□□□ -1.04
PRPF40B-204ENST00000527253 ZNF85Q03923 595 aa8.55□□□□□ -1.04
PRPF40B-204ENST00000527253 ODF4Q2M2E3 257 aa8.55□□□□□ -1.04
PRPF40B-204ENST00000527253 CLVS2Q5SYC1 327 aa8.55□□□□□ -1.04
PRPF40B-204ENST00000527253 METAP1DQ6UB28 335 aaPredicted RBP8.55□□□□□ -1.04
PRPF40B-204ENST00000527253 ANGPTL5Q86XS5 388 aa8.55□□□□□ -1.04
PRPF40B-204ENST00000527253 LDLRAD3Q86YD5 345 aa8.55□□□□□ -1.04
PRPF40B-204ENST00000527253 GID4Q8IVV7 300 aa8.55□□□□□ -1.04
PRPF40B-204ENST00000527253 PRSS35Q8N3Z0 413 aa8.55□□□□□ -1.04
PRPF40B-204ENST00000527253 YIPF7Q8N8F6 280 aa8.55□□□□□ -1.04
PRPF40B-204ENST00000527253 OR2T27Q8NH04 317 aa8.55□□□□□ -1.04
PRPF40B-204ENST00000527253 RORBQ92753 470 aa8.55□□□□□ -1.04
PRPF40B-204ENST00000527253 NRIP2Q9BQI9 281 aa8.55□□□□□ -1.04
PRPF40B-204ENST00000527253 MOB1AQ9H8S9 216 aa8.55□□□□□ -1.04
PRPF40B-204ENST00000527253 C19orf12Q9NSK7 152 aa8.55□□□□□ -1.04
PRPF40B-204ENST00000527253 RASL12Q9NYN1 266 aa8.55□□□□□ -1.04
PRPF40B-204ENST00000527253 AASSQ9UDR5 926 aa8.55□□□□□ -1.04
PRPF40B-204ENST00000527253 MMP24Q9Y5R2 645 aa8.55□□□□□ -1.04
PRPF40B-204ENST00000527253 WNK1Q9H4A3 2382 aa8.55□□□□□ -1.04
PRPF40B-204ENST00000527253 IGKV1-27A0A075B6S5 117 aa8.54□□□□□ -1.04
PRPF40B-204ENST00000527253 RFPL4AA6NLU0 287 aa8.54□□□□□ -1.04
PRPF40B-204ENST00000527253 POM121CA8CG34 1229 aa8.54□□□□□ -1.04
PRPF40B-204ENST00000527253 RFPL4AL1F8VTS6 287 aa8.54□□□□□ -1.04
PRPF40B-204ENST00000527253 F8VVB4 439 aa8.54□□□□□ -1.04
PRPF40B-204ENST00000527253 F8VWA3 439 aa8.54□□□□□ -1.04
PRPF40B-204ENST00000527253 J3QT63 122 aa8.54□□□□□ -1.04
PRPF40B-204ENST00000527253 DLGAP1O14490 977 aa8.54□□□□□ -1.04
PRPF40B-204ENST00000527253 ENTPD6O75354 484 aa8.54□□□□□ -1.04
PRPF40B-204ENST00000527253 CIB2O75838 187 aa8.54□□□□□ -1.04
PRPF40B-204ENST00000527253 ALPLP05186 524 aa8.54□□□□□ -1.04
PRPF40B-204ENST00000527253 KRT8P05787 483 aa8.54□□□□□ -1.04
PRPF40B-204ENST00000527253 KIR3DL2P43630 455 aa8.54□□□□□ -1.04
PRPF40B-204ENST00000527253 HAAOP46952 286 aa8.54□□□□□ -1.04
PRPF40B-204ENST00000527253 RAG2P55895 527 aa8.54□□□□□ -1.04
PRPF40B-204ENST00000527253 ERVFRD-1P60508 538 aa8.54□□□□□ -1.04
PRPF40B-204ENST00000527253 ACTR3P61158 418 aa8.54□□□□□ -1.04
PRPF40B-204ENST00000527253 ISL1P61371 349 aa8.54□□□□□ -1.04
PRPF40B-204ENST00000527253 ERVK11-1P61568 191 aa8.54□□□□□ -1.04
PRPF40B-204ENST00000527253 KPNB1Q14974 876 aaKnown RBP8.54□□□□□ -1.04
PRPF40B-204ENST00000527253 UBE2V2Q15819 145 aa8.54□□□□□ -1.04
PRPF40B-204ENST00000527253 TAF9Q16594 264 aa8.54□□□□□ -1.04
PRPF40B-204ENST00000527253 TP53I3Q53FA7 332 aa8.54□□□□□ -1.04
PRPF40B-204ENST00000527253 PRR31Q5SQ13 230 aa8.54□□□□□ -1.04
PRPF40B-204ENST00000527253 C1orf122Q6ZSJ8 110 aa8.54□□□□□ -1.04
PRPF40B-204ENST00000527253 CALHM1Q8IU99 346 aa8.54□□□□□ -1.04
PRPF40B-204ENST00000527253 CMTM4Q8IZR5 234 aa8.54□□□□□ -1.04
PRPF40B-204ENST00000527253 RDH10Q8IZV5 341 aa8.54□□□□□ -1.04
PRPF40B-204ENST00000527253 C11orf42Q8N5U0 333 aa8.54□□□□□ -1.04
PRPF40B-204ENST00000527253 OR10H4Q8NGA5 316 aa8.54□□□□□ -1.04
PRPF40B-204ENST00000527253 OR8J1Q8NGP2 316 aa8.54□□□□□ -1.04
PRPF40B-204ENST00000527253 C17orf50Q8WW18 174 aa8.54□□□□□ -1.04
PRPF40B-204ENST00000527253 SSMEM1Q8WWF3 244 aa8.54□□□□□ -1.04
PRPF40B-204ENST00000527253 AJUBAQ96IF1 538 aa8.54□□□□□ -1.04
PRPF40B-204ENST00000527253 HES4Q9HCC6 221 aa8.54□□□□□ -1.04
PRPF40B-204ENST00000527253 ENOPH1Q9UHY7 261 aa8.54□□□□□ -1.04
PRPF40B-204ENST00000527253 POMT1Q9Y6A1 747 aa8.54□□□□□ -1.04
PRPF40B-204ENST00000527253 TRRAPQ9Y4A5 3859 aa8.54□□□□□ -1.04
PRPF40B-204ENST00000527253 J3QRE1 110 aa8.53□□□□□ -1.04
PRPF40B-204ENST00000527253 M0R1W7 72 aa8.53□□□□□ -1.04
PRPF40B-204ENST00000527253 NPFFO15130 113 aa8.53□□□□□ -1.04
PRPF40B-204ENST00000527253 GPR137BO60478 399 aa8.53□□□□□ -1.04
PRPF40B-204ENST00000527253 SULT1C4O75897 302 aa8.53□□□□□ -1.04
PRPF40B-204ENST00000527253 NDUFA7O95182 113 aa8.53□□□□□ -1.04
PRPF40B-204ENST00000527253 MPZP25189 248 aa8.53□□□□□ -1.04
PRPF40B-204ENST00000527253 PRDX2P32119 198 aa8.53□□□□□ -1.04
PRPF40B-204ENST00000527253 ZIK1Q3SY52 487 aaPredicted RBP8.53□□□□□ -1.04
PRPF40B-204ENST00000527253 ZNF573Q86YE8 665 aa8.53□□□□□ -1.04
PRPF40B-204ENST00000527253 TMEM185AQ8NFB2 350 aa8.53□□□□□ -1.04
PRPF40B-204ENST00000527253 TRMT10AQ8TBZ6 339 aaKnown RBP8.53□□□□□ -1.04
PRPF40B-204ENST00000527253 TBC1D15Q8TC07 691 aa8.53□□□□□ -1.04
PRPF40B-204ENST00000527253 NPRL2Q8WTW4 380 aa8.53□□□□□ -1.04
PRPF40B-204ENST00000527253 RBM4BQ9BQ04 359 aaKnown RBP8.53□□□□□ -1.04
PRPF40B-204ENST00000527253 SLITRK2Q9H156 845 aa8.53□□□□□ -1.04
PRPF40B-204ENST00000527253 ZNF696Q9H7X3 374 aa8.53□□□□□ -1.04
PRPF40B-204ENST00000527253 USE1Q9NZ43 259 aa8.53□□□□□ -1.04
PRPF40B-204ENST00000527253 FAM230AA0A1W2PPH8 454 aa8.52□□□□□ -1.05
PRPF40B-204ENST00000527253 A0A1W2PQ09 198 aa8.52□□□□□ -1.05
PRPF40B-204ENST00000527253 ANKRD61A6NGH8 418 aa8.52□□□□□ -1.05
PRPF40B-204ENST00000527253 DHRS7CA6NNS2 312 aa8.52□□□□□ -1.05
PRPF40B-204ENST00000527253 EI24O14681 340 aa8.52□□□□□ -1.05
PRPF40B-204ENST00000527253 SYT7O43581 403 aa8.52□□□□□ -1.05
PRPF40B-204ENST00000527253 GABRB1P18505 474 aa8.52□□□□□ -1.05
PRPF40B-204ENST00000527253 UBE2E1P51965 193 aa8.52□□□□□ -1.05
PRPF40B-204ENST00000527253 TMED1Q13445 227 aa8.52□□□□□ -1.05
PRPF40B-204ENST00000527253 SLC25A30Q5SVS4 291 aa8.52□□□□□ -1.05
PRPF40B-204ENST00000527253 TMEM200BQ69YZ2 307 aa8.52□□□□□ -1.05
PRPF40B-204ENST00000527253 FAM185AQ8N0U4 392 aa8.52□□□□□ -1.05
PRPF40B-204ENST00000527253 OR4M1Q8NGD0 313 aa8.52□□□□□ -1.05
PRPF40B-204ENST00000527253 TRUB1Q8WWH5 349 aaKnown RBP8.52□□□□□ -1.05
PRPF40B-204ENST00000527253 WFDC12Q8WWY7 111 aa8.52□□□□□ -1.05
PRPF40B-204ENST00000527253 DYRK2Q92630 601 aa8.52□□□□□ -1.05
PRPF40B-204ENST00000527253 HRASLS5Q96KN8 279 aa8.52□□□□□ -1.05
PRPF40B-204ENST00000527253 MBOAT4Q96T53 435 aa8.52□□□□□ -1.05
PRPF40B-204ENST00000527253 METTL8Q9H825 291 aaKnown RBP8.52□□□□□ -1.05
PRPF40B-204ENST00000527253 MTCH1Q9NZJ7 389 aa8.52□□□□□ -1.05
PRPF40B-204ENST00000527253 ZNRD1Q9P1U0 126 aa8.52□□□□□ -1.05
PRPF40B-204ENST00000527253 FAM96BQ9Y3D0 163 aa8.52□□□□□ -1.05
PRPF40B-204ENST00000527253 TRBV23-1A0A0A0MS06 115 aa8.51□□□□□ -1.05
PRPF40B-204ENST00000527253 IGKV1-9A0A0C4DH69 117 aa8.51□□□□□ -1.05
PRPF40B-204ENST00000527253 CLPSL1A2RUU4 121 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms