RNA–Protein interactions for RNA: ENST00000525964.6

NCAPD3-203, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 1 (best)

Gene NCAPD3, Length 5,025 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-203ENST00000525964 NEIL1Q96FI4 390 aaPredicted RBP12.89□□□□□ -0.35
NCAPD3-203ENST00000525964 SMIM7Q9BQ49 75 aa12.89□□□□□ -0.35
NCAPD3-203ENST00000525964 TMED3Q9Y3Q3 217 aa12.89□□□□□ -0.35
NCAPD3-203ENST00000525964 DBX1A6NMT0 343 aa12.89□□□□□ -0.35
NCAPD3-203ENST00000525964 FGF7P21781 194 aa12.89□□□□□ -0.35
NCAPD3-203ENST00000525964 TGFBR1P36897 503 aa12.89□□□□□ -0.35
NCAPD3-203ENST00000525964 CNN1P51911 297 aaKnown RBP12.89□□□□□ -0.35
NCAPD3-203ENST00000525964 C21orf58P58505 322 aa12.89□□□□□ -0.35
NCAPD3-203ENST00000525964 OR5I1Q13606 314 aa12.89□□□□□ -0.35
NCAPD3-203ENST00000525964 OR5AP2Q8NGF4 316 aa12.89□□□□□ -0.35
NCAPD3-203ENST00000525964 SRRQ9GZT4 340 aa12.89□□□□□ -0.35
NCAPD3-203ENST00000525964 SIRT5Q9NXA8 310 aa12.89□□□□□ -0.35
NCAPD3-203ENST00000525964 TRAV38-1A0A0B4J264 116 aa12.89□□□□□ -0.35
NCAPD3-203ENST00000525964 ADAM20O43506 726 aa12.89□□□□□ -0.35
NCAPD3-203ENST00000525964 CTLA4P16410 223 aa12.89□□□□□ -0.35
NCAPD3-203ENST00000525964 CDKN2AP42771 156 aaKnown RBP12.89□□□□□ -0.35
NCAPD3-203ENST00000525964 ZDHHC22Q8N966 263 aa12.89□□□□□ -0.35
NCAPD3-203ENST00000525964 RHNO1Q9BSD3 238 aa12.89□□□□□ -0.35
NCAPD3-203ENST00000525964 AAMDCQ9H7C9 122 aa12.89□□□□□ -0.35
NCAPD3-203ENST00000525964 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.89□□□□□ -0.35
NCAPD3-203ENST00000525964 SPAARA0A1B0GVQ0 90 aa12.88□□□□□ -0.35
NCAPD3-203ENST00000525964 H3BP45 60 aa12.88□□□□□ -0.35
NCAPD3-203ENST00000525964 S100A4P26447 101 aaKnown RBP12.88□□□□□ -0.35
NCAPD3-203ENST00000525964 KIAA0141Q14154 515 aaPredicted RBP12.88□□□□□ -0.35
NCAPD3-203ENST00000525964 C14orf79Q96F83 325 aa12.88□□□□□ -0.35
NCAPD3-203ENST00000525964 C20orf24Q9BUV8 137 aa12.88□□□□□ -0.35
NCAPD3-203ENST00000525964 SLC35D1Q9NTN3 355 aa12.88□□□□□ -0.35
NCAPD3-203ENST00000525964 FKBP11Q9NYL4 201 aa12.88□□□□□ -0.35
NCAPD3-203ENST00000525964 IL36GQ9NZH8 169 aa12.88□□□□□ -0.35
NCAPD3-203ENST00000525964 LRRC3CA6NJW4 275 aa12.88□□□□□ -0.35
NCAPD3-203ENST00000525964 TGOLN2O43493 480 aa12.88□□□□□ -0.35
NCAPD3-203ENST00000525964 GNG10P50151 68 aa12.88□□□□□ -0.35
NCAPD3-203ENST00000525964 SFTPA1Q8IWL2 248 aa12.88□□□□□ -0.35
NCAPD3-203ENST00000525964 DHRS9Q9BPW9 319 aa12.88□□□□□ -0.35
NCAPD3-203ENST00000525964 ZNF275Q9NSD4 429 aaPredicted RBP12.88□□□□□ -0.35
NCAPD3-203ENST00000525964 V9GYS6 101 aa12.88□□□□□ -0.35
NCAPD3-203ENST00000525964 LTBP4Q8N2S1 1624 aa12.88□□□□□ -0.35
NCAPD3-203ENST00000525964 ADAM10O14672 748 aa12.88□□□□□ -0.35
NCAPD3-203ENST00000525964 LINC00303Q3SY05 128 aa12.88□□□□□ -0.35
NCAPD3-203ENST00000525964 OR10Z1Q8NGY1 313 aa12.88□□□□□ -0.35
NCAPD3-203ENST00000525964 ARHGAP5-AS1Q96IT6 56 aa12.88□□□□□ -0.35
NCAPD3-203ENST00000525964 WDR54Q9H977 334 aa12.88□□□□□ -0.35
NCAPD3-203ENST00000525964 SIRT3Q9NTG7 399 aaPredicted RBP12.88□□□□□ -0.35
NCAPD3-203ENST00000525964 RYDENQ9NUL5 291 aaKnown RBP12.88□□□□□ -0.35
NCAPD3-203ENST00000525964 FZR1Q9UM11 496 aa12.88□□□□□ -0.35
NCAPD3-203ENST00000525964 PSG11Q9UQ72 335 aa12.88□□□□□ -0.35
NCAPD3-203ENST00000525964 OR2C1O95371 312 aa12.88□□□□□ -0.35
NCAPD3-203ENST00000525964 PCBP3P57721 371 aaKnown RBP12.88□□□□□ -0.35
NCAPD3-203ENST00000525964 LSM6P62312 80 aaKnown RBP12.88□□□□□ -0.35
NCAPD3-203ENST00000525964 GUCA2AQ02747 115 aa12.88□□□□□ -0.35
NCAPD3-203ENST00000525964 VSTM2LQ96N03 204 aa12.88□□□□□ -0.35
NCAPD3-203ENST00000525964 RCL1Q9Y2P8 373 aaKnown RBP12.88□□□□□ -0.35
NCAPD3-203ENST00000525964 A0A1W2PN81 502 aa12.87□□□□□ -0.35
NCAPD3-203ENST00000525964 FCGR3BO75015 233 aa12.87□□□□□ -0.35
NCAPD3-203ENST00000525964 CHRNA7P36544 502 aa12.87□□□□□ -0.35
NCAPD3-203ENST00000525964 Q56UQ5 140 aa12.87□□□□□ -0.35
NCAPD3-203ENST00000525964 BHLHA15Q7RTS1 189 aaPredicted RBP12.87□□□□□ -0.35
NCAPD3-203ENST00000525964 UBALD1Q8TB05 177 aa12.87□□□□□ -0.35
NCAPD3-203ENST00000525964 SEBOXQ9HB31 216 aaPredicted RBP12.87□□□□□ -0.35
NCAPD3-203ENST00000525964 COL18A1P39060 1754 aa12.87□□□□□ -0.35
NCAPD3-203ENST00000525964 AHCTF1Q8WYP5 2266 aa12.87□□□□□ -0.35
NCAPD3-203ENST00000525964 IGHV5-10-1A0A0J9YXX1 117 aa12.87□□□□□ -0.35
NCAPD3-203ENST00000525964 SMIM17P0DL12 118 aa12.87□□□□□ -0.35
NCAPD3-203ENST00000525964 MRM1Q6IN84 353 aaKnown RBP12.87□□□□□ -0.35
NCAPD3-203ENST00000525964 MOGAT1Q96PD6 335 aa12.87□□□□□ -0.35
NCAPD3-203ENST00000525964 OR51I2Q9H344 312 aa12.87□□□□□ -0.35
NCAPD3-203ENST00000525964 SERTM2A0A1B0GWG4 89 aa12.87□□□□□ -0.35
NCAPD3-203ENST00000525964 FGF2P09038 288 aa12.87□□□□□ -0.35
NCAPD3-203ENST00000525964 BRS3P32247 399 aa12.87□□□□□ -0.35
NCAPD3-203ENST00000525964 ADTRPQ96IZ2 230 aa12.87□□□□□ -0.35
NCAPD3-203ENST00000525964 UQCC1Q9NVA1 299 aa12.87□□□□□ -0.35
NCAPD3-203ENST00000525964 KIR2DS2P43631 304 aa12.87□□□□□ -0.35
NCAPD3-203ENST00000525964 DGAT2L6Q6ZPD8 337 aa12.87□□□□□ -0.35
NCAPD3-203ENST00000525964 PTP4A1Q93096 173 aa12.87□□□□□ -0.35
NCAPD3-203ENST00000525964 GRAMD2BQ96HH9 432 aa12.87□□□□□ -0.35
NCAPD3-203ENST00000525964 SHROOM3Q8TF72 1996 aa12.87□□□□□ -0.35
NCAPD3-203ENST00000525964 LAMA4Q16363 1823 aa12.87□□□□□ -0.35
NCAPD3-203ENST00000525964 DOCK1Q14185 1865 aa12.86□□□□□ -0.35
NCAPD3-203ENST00000525964 C3orf80F5H4A9 247 aa12.86□□□□□ -0.35
NCAPD3-203ENST00000525964 RBP4P02753 201 aa12.86□□□□□ -0.35
NCAPD3-203ENST00000525964 COX7A1P24310 79 aa12.86□□□□□ -0.35
NCAPD3-203ENST00000525964 PSG6Q00889 435 aa12.86□□□□□ -0.35
NCAPD3-203ENST00000525964 PDZK1IP1Q13113 114 aa12.86□□□□□ -0.35
NCAPD3-203ENST00000525964 PDCD1Q15116 288 aa12.86□□□□□ -0.35
NCAPD3-203ENST00000525964 ZNRF4Q8WWF5 429 aa12.86□□□□□ -0.35
NCAPD3-203ENST00000525964 PIK3IP1Q96FE7 263 aa12.86□□□□□ -0.35
NCAPD3-203ENST00000525964 WDR89Q96FK6 387 aaPredicted RBP12.86□□□□□ -0.35
NCAPD3-203ENST00000525964 EXOGQ9Y2C4 368 aaKnown RBP12.86□□□□□ -0.35
NCAPD3-203ENST00000525964 CST7O76096 145 aa12.86□□□□□ -0.35
NCAPD3-203ENST00000525964 CDC20Q12834 499 aa12.86□□□□□ -0.35
NCAPD3-203ENST00000525964 DCAF10Q5QP82 559 aa12.86□□□□□ -0.35
NCAPD3-203ENST00000525964 OR5M8Q8NGP6 311 aa12.86□□□□□ -0.35
NCAPD3-203ENST00000525964 FAM122AQ96E09 287 aa12.86□□□□□ -0.35
NCAPD3-203ENST00000525964 RAB40CQ96S21 281 aa12.86□□□□□ -0.35
NCAPD3-203ENST00000525964 CDX4O14627 284 aaPredicted RBP12.86□□□□□ -0.35
NCAPD3-203ENST00000525964 THSD4Q6ZMP0 1018 aa12.86□□□□□ -0.35
NCAPD3-203ENST00000525964 MRGPREQ86SM8 312 aa12.86□□□□□ -0.35
NCAPD3-203ENST00000525964 OR13D1Q8NGV5 346 aa12.86□□□□□ -0.35
NCAPD3-203ENST00000525964 RXFP4Q8TDU9 374 aa12.86□□□□□ -0.35
NCAPD3-203ENST00000525964 ASB5Q8WWX0 329 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms