RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 PDZD11Q5EBL8 140 aa1.77□□□□□ -2.13
CD44-215ENST00000525241 LIN9Q5TKA1 542 aa1.77□□□□□ -2.13
CD44-215ENST00000525241 TRMT10CQ7L0Y3 403 aaKnown RBP1.77□□□□□ -2.13
CD44-215ENST00000525241 MRPL21Q7Z2W9 205 aaKnown RBP1.77□□□□□ -2.13
CD44-215ENST00000525241 ITPRIPQ8IWB1 547 aa1.77□□□□□ -2.13
CD44-215ENST00000525241 CMTM2Q8TAZ6 248 aa1.77□□□□□ -2.13
CD44-215ENST00000525241 ORAOV1Q8WV07 137 aa1.77□□□□□ -2.13
CD44-215ENST00000525241 OR8D1Q8WZ84 308 aa1.77□□□□□ -2.13
CD44-215ENST00000525241 DSN1Q9H410 356 aa1.77□□□□□ -2.13
CD44-215ENST00000525241 TMEM38BQ9NVV0 291 aa1.77□□□□□ -2.13
CD44-215ENST00000525241 RHBDD3Q9Y3P4 386 aa1.77□□□□□ -2.13
CD44-215ENST00000525241 KLF12Q9Y4X4 402 aa1.77□□□□□ -2.13
CD44-215ENST00000525241 KMT2BQ9UMN6 2715 aaPredicted RBP1.76□□□□□ -2.13
CD44-215ENST00000525241 BAZ1BQ9UIG0 1483 aaKnown RBP1.76□□□□□ -2.13
CD44-215ENST00000525241 SBNO1A3KN83 1393 aa1.76□□□□□ -2.13
CD44-215ENST00000525241 IGKV1OR2-108A0A075B7D4 117 aa1.76□□□□□ -2.13
CD44-215ENST00000525241 H3BQ85 93 aa1.76□□□□□ -2.13
CD44-215ENST00000525241 DFFAO00273 331 aa1.76□□□□□ -2.13
CD44-215ENST00000525241 NDUFS5O43920 106 aa1.76□□□□□ -2.13
CD44-215ENST00000525241 GCGP01275 180 aa1.76□□□□□ -2.13
CD44-215ENST00000525241 OR4Q2P0C623 313 aa1.76□□□□□ -2.13
CD44-215ENST00000525241 HLA-GP17693 338 aa1.76□□□□□ -2.13
CD44-215ENST00000525241 PMCHP20382 165 aa1.76□□□□□ -2.13
CD44-215ENST00000525241 TUBG1P23258 451 aa1.76□□□□□ -2.13
CD44-215ENST00000525241 GNRHRP30968 328 aa1.76□□□□□ -2.13
CD44-215ENST00000525241 C2orf54Q08AI8 447 aa1.76□□□□□ -2.13
CD44-215ENST00000525241 BBOF1Q8ND07 529 aa1.76□□□□□ -2.13
CD44-215ENST00000525241 LY6G5BQ8NDX9 201 aa1.76□□□□□ -2.13
CD44-215ENST00000525241 PROKR2Q8NFJ6 384 aa1.76□□□□□ -2.13
CD44-215ENST00000525241 OR52K2Q8NGK3 314 aa1.76□□□□□ -2.13
CD44-215ENST00000525241 ACTL9Q8TC94 416 aa1.76□□□□□ -2.13
CD44-215ENST00000525241 PIH1D2Q8WWB5 315 aa1.76□□□□□ -2.13
CD44-215ENST00000525241 BAALCQ8WXS3 180 aa1.76□□□□□ -2.13
CD44-215ENST00000525241 RNF170Q96K19 258 aa1.76□□□□□ -2.13
CD44-215ENST00000525241 IGF2BP2-AS1Q96M15 143 aa1.76□□□□□ -2.13
CD44-215ENST00000525241 OR2AG1Q9H205 316 aa1.76□□□□□ -2.13
CD44-215ENST00000525241 TUBG2Q9NRH3 451 aa1.76□□□□□ -2.13
CD44-215ENST00000525241 ZMAT5Q9UDW3 170 aaKnown RBP1.76□□□□□ -2.13
CD44-215ENST00000525241 CACNA1DQ01668 2161 aa1.75□□□□□ -2.13
CD44-215ENST00000525241 A0A1B0GTQ1 180 aa1.75□□□□□ -2.13
CD44-215ENST00000525241 ZNF701M0R085 212 aaPredicted RBP1.75□□□□□ -2.13
CD44-215ENST00000525241 TUFMP49411 452 aaKnown RBP1.75□□□□□ -2.13
CD44-215ENST00000525241 GZMMP51124 257 aa1.75□□□□□ -2.13
CD44-215ENST00000525241 LCN2P80188 198 aa1.75□□□□□ -2.13
CD44-215ENST00000525241 ZNF141Q15928 474 aa1.75□□□□□ -2.13
CD44-215ENST00000525241 KRTAP25-1Q3LHN0 102 aa1.75□□□□□ -2.13
CD44-215ENST00000525241 PIP5KL1Q5T9C9 394 aa1.75□□□□□ -2.13
CD44-215ENST00000525241 CPTPQ5TA50 214 aa1.75□□□□□ -2.13
CD44-215ENST00000525241 MLIPQ5VWP3 458 aa1.75□□□□□ -2.13
CD44-215ENST00000525241 ULK3Q6PHR2 472 aa1.75□□□□□ -2.13
CD44-215ENST00000525241 OR2W3Q7Z3T1 314 aa1.75□□□□□ -2.13
CD44-215ENST00000525241 ZDHHC22Q8N966 263 aa1.75□□□□□ -2.13
CD44-215ENST00000525241 ING5Q8WYH8 240 aa1.75□□□□□ -2.13
CD44-215ENST00000525241 CERS2Q96G23 380 aa1.75□□□□□ -2.13
CD44-215ENST00000525241 SPACA5Q96QH8 159 aa1.75□□□□□ -2.13
CD44-215ENST00000525241 ABCG5Q9H222 651 aa1.75□□□□□ -2.13
CD44-215ENST00000525241 ABCB9Q9NP78 766 aa1.75□□□□□ -2.13
CD44-215ENST00000525241 MCTS1Q9ULC4 181 aaKnown RBP1.75□□□□□ -2.13
CD44-215ENST00000525241 SSH2Q76I76 1423 aa1.74□□□□□ -2.13
CD44-215ENST00000525241 WDR19Q8NEZ3 1342 aa1.74□□□□□ -2.13
CD44-215ENST00000525241 IGLV10-54A0A075B6I4 117 aa1.74□□□□□ -2.13
CD44-215ENST00000525241 IGLL5B9A064 214 aa1.74□□□□□ -2.13
CD44-215ENST00000525241 D6RAR5 112 aa1.74□□□□□ -2.13
CD44-215ENST00000525241 E7EQL1 145 aa1.74□□□□□ -2.13
CD44-215ENST00000525241 UPK1AO00322 258 aa1.74□□□□□ -2.13
CD44-215ENST00000525241 AQP9O43315 295 aa1.74□□□□□ -2.13
CD44-215ENST00000525241 ENTPD6O75354 484 aa1.74□□□□□ -2.13
CD44-215ENST00000525241 DEDDO75618 318 aa1.74□□□□□ -2.13
CD44-215ENST00000525241 CFHR2P36980 270 aa1.74□□□□□ -2.13
CD44-215ENST00000525241 HCCSP53701 268 aa1.74□□□□□ -2.13
CD44-215ENST00000525241 FOXA1P55317 472 aa1.74□□□□□ -2.13
CD44-215ENST00000525241 KCTD16Q68DU8 428 aa1.74□□□□□ -2.13
CD44-215ENST00000525241 OTUD6AQ7L8S5 288 aa1.74□□□□□ -2.13
CD44-215ENST00000525241 TMEM144Q7Z5S9 345 aa1.74□□□□□ -2.13
CD44-215ENST00000525241 VTCN1Q7Z7D3 282 aa1.74□□□□□ -2.13
CD44-215ENST00000525241 PRNTQ86SH4 94 aa1.74□□□□□ -2.13
CD44-215ENST00000525241 LINC00337Q8N6G1 96 aa1.74□□□□□ -2.13
CD44-215ENST00000525241 MUC7Q8TAX7 377 aa1.74□□□□□ -2.13
CD44-215ENST00000525241 OTUB2Q96DC9 234 aa1.74□□□□□ -2.13
CD44-215ENST00000525241 ARMC7Q9H6L4 198 aa1.74□□□□□ -2.13
CD44-215ENST00000525241 LOXHD1Q8IVV2 1947 aa1.74□□□□□ -2.13
CD44-215ENST00000525241 C3orf84H3BNL1 204 aa1.73□□□□□ -2.13
CD44-215ENST00000525241 CXorf1O96002 111 aa1.73□□□□□ -2.13
CD44-215ENST00000525241 IGHMP01871 453 aa1.73□□□□□ -2.13
CD44-215ENST00000525241 STAG3L3P0CL85 134 aa1.73□□□□□ -2.13
CD44-215ENST00000525241 SLC6A1P30531 599 aa1.73□□□□□ -2.13
CD44-215ENST00000525241 PSMB2P49721 201 aa1.73□□□□□ -2.13
CD44-215ENST00000525241 PSMD4P55036 377 aaKnown RBP1.73□□□□□ -2.13
CD44-215ENST00000525241 DAOAP59103 153 aa1.73□□□□□ -2.13
CD44-215ENST00000525241 SPAG1Q07617 926 aa1.73□□□□□ -2.13
CD44-215ENST00000525241 LAMTOR4Q0VGL1 99 aa1.73□□□□□ -2.13
CD44-215ENST00000525241 ST3GAL4Q11206 333 aa1.73□□□□□ -2.13
CD44-215ENST00000525241 HIKESHIQ53FT3 197 aa1.73□□□□□ -2.13
CD44-215ENST00000525241 TTC32Q5I0X7 151 aa1.73□□□□□ -2.13
CD44-215ENST00000525241 TTC19Q6DKK2 380 aaPredicted RBP1.73□□□□□ -2.13
CD44-215ENST00000525241 EPGNQ6UW88 154 aa1.73□□□□□ -2.13
CD44-215ENST00000525241 SLC35D2Q76EJ3 337 aa1.73□□□□□ -2.13
CD44-215ENST00000525241 PAGE2Q7Z2X7 111 aa1.73□□□□□ -2.13
CD44-215ENST00000525241 TMCO2Q7Z6W1 182 aaPredicted RBP1.73□□□□□ -2.13
CD44-215ENST00000525241 ZNF555Q8NEP9 628 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms