RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 TEX38Q6PEX7 206 aa10.82□□□□□ -0.68
NKX3-1-202ENST00000523261 ZNF429Q86V71 674 aa10.82□□□□□ -0.68
NKX3-1-202ENST00000523261 STPG2Q8N412 459 aa10.82□□□□□ -0.68
NKX3-1-202ENST00000523261 ZNF676Q8N7Q3 588 aa10.82□□□□□ -0.68
NKX3-1-202ENST00000523261 ZNF671Q8TAW3 534 aa10.82□□□□□ -0.68
NKX3-1-202ENST00000523261 AQP3Q92482 292 aa10.82□□□□□ -0.68
NKX3-1-202ENST00000523261 PIGCQ92535 297 aa10.82□□□□□ -0.68
NKX3-1-202ENST00000523261 SLAMF6Q96DU3 332 aa10.82□□□□□ -0.68
NKX3-1-202ENST00000523261 TPD52L3Q96J77 140 aa10.82□□□□□ -0.68
NKX3-1-202ENST00000523261 ZNF714Q96N38 554 aa10.82□□□□□ -0.68
NKX3-1-202ENST00000523261 TMEM109Q9BVC6 243 aa10.82□□□□□ -0.68
NKX3-1-202ENST00000523261 TMEM133Q9H2Q1 129 aa10.82□□□□□ -0.68
NKX3-1-202ENST00000523261 C19orf73Q9NVV2 129 aa10.82□□□□□ -0.68
NKX3-1-202ENST00000523261 SESN1Q9Y6P5 492 aa10.82□□□□□ -0.68
NKX3-1-202ENST00000523261 TVP23AA6NH52 213 aa10.81□□□□□ -0.68
NKX3-1-202ENST00000523261 ZNF878C9JN71 531 aa10.81□□□□□ -0.68
NKX3-1-202ENST00000523261 ARHGDIBP52566 201 aa10.81□□□□□ -0.68
NKX3-1-202ENST00000523261 NANOGP8Q6NSW7 305 aa10.81□□□□□ -0.68
NKX3-1-202ENST00000523261 LYPD4Q6UWN0 246 aa10.81□□□□□ -0.68
NKX3-1-202ENST00000523261 RRM2BQ7LG56 351 aa10.81□□□□□ -0.68
NKX3-1-202ENST00000523261 ZDHHC23Q8IYP9 409 aa10.81□□□□□ -0.68
NKX3-1-202ENST00000523261 LINC00471Q8N535 108 aa10.81□□□□□ -0.68
NKX3-1-202ENST00000523261 MREGQ8N565 214 aa10.81□□□□□ -0.68
NKX3-1-202ENST00000523261 RNF152Q8N8N0 203 aa10.81□□□□□ -0.68
NKX3-1-202ENST00000523261 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.81□□□□□ -0.68
NKX3-1-202ENST00000523261 ZNF488Q96MN9 340 aa10.81□□□□□ -0.68
NKX3-1-202ENST00000523261 ISYNA1Q9NPH2 558 aa10.81□□□□□ -0.68
NKX3-1-202ENST00000523261 A8MZ25 164 aa10.8□□□□□ -0.68
NKX3-1-202ENST00000523261 K7N7A8 449 aa10.8□□□□□ -0.68
NKX3-1-202ENST00000523261 ARPC3O15145 178 aa10.8□□□□□ -0.68
NKX3-1-202ENST00000523261 IGHG2P01859 326 aa10.8□□□□□ -0.68
NKX3-1-202ENST00000523261 IFNA6P05013 189 aa10.8□□□□□ -0.68
NKX3-1-202ENST00000523261 PYCR1P32322 319 aa10.8□□□□□ -0.68
NKX3-1-202ENST00000523261 OMPP47874 163 aa10.8□□□□□ -0.68
NKX3-1-202ENST00000523261 MTNR1BP49286 362 aa10.8□□□□□ -0.68
NKX3-1-202ENST00000523261 GNG3P63215 75 aa10.8□□□□□ -0.68
NKX3-1-202ENST00000523261 BDH1Q02338 343 aa10.8□□□□□ -0.68
NKX3-1-202ENST00000523261 SRSF7Q16629 238 aaKnown RBP eCLIP10.8□□□□□ -0.68
NKX3-1-202ENST00000523261 LRRC23Q53EV4 343 aaPredicted RBP10.8□□□□□ -0.68
NKX3-1-202ENST00000523261 CXorf66Q5JRM2 361 aaPredicted RBP10.8□□□□□ -0.68
NKX3-1-202ENST00000523261 SMARCD3Q6STE5 483 aa10.8□□□□□ -0.68
NKX3-1-202ENST00000523261 ZBTB49Q6ZSB9 765 aa10.8□□□□□ -0.68
NKX3-1-202ENST00000523261 FAM57BQ71RH2 274 aa10.8□□□□□ -0.68
NKX3-1-202ENST00000523261 SLC35E3Q7Z769 313 aa10.8□□□□□ -0.68
NKX3-1-202ENST00000523261 TIGD4Q8IY51 512 aa10.8□□□□□ -0.68
NKX3-1-202ENST00000523261 C5orf56Q8N8D9 126 aa10.8□□□□□ -0.68
NKX3-1-202ENST00000523261 ANKRD42Q8N9B4 389 aa10.8□□□□□ -0.68
NKX3-1-202ENST00000523261 POC1AQ8NBT0 407 aa10.8□□□□□ -0.68
NKX3-1-202ENST00000523261 C4orf3Q8WVX3 66 aa10.8□□□□□ -0.68
NKX3-1-202ENST00000523261 EBF4Q9BQW3 602 aa10.8□□□□□ -0.68
NKX3-1-202ENST00000523261 TNCP24821 2201 aa10.79□□□□□ -0.68
NKX3-1-202ENST00000523261 ZNF732B4DXR9 585 aa10.79□□□□□ -0.68
NKX3-1-202ENST00000523261 RGS16O15492 202 aaPredicted RBP10.79□□□□□ -0.68
NKX3-1-202ENST00000523261 KDELR2P33947 212 aa10.79□□□□□ -0.68
NKX3-1-202ENST00000523261 EDDM3BP56851 147 aa10.79□□□□□ -0.68
NKX3-1-202ENST00000523261 GRB2P62993 217 aaKnown RBP10.79□□□□□ -0.68
NKX3-1-202ENST00000523261 SELENOWP63302 87 aa10.79□□□□□ -0.68
NKX3-1-202ENST00000523261 PNLIPRP3Q17RR3 467 aa10.79□□□□□ -0.68
NKX3-1-202ENST00000523261 KRT71Q3SY84 523 aa10.79□□□□□ -0.68
NKX3-1-202ENST00000523261 ASPHD1Q5U4P2 390 aa10.79□□□□□ -0.68
NKX3-1-202ENST00000523261 HAGHLQ6PII5 290 aaPredicted RBP10.79□□□□□ -0.68
NKX3-1-202ENST00000523261 FOXRED2Q8IWF2 684 aa10.79□□□□□ -0.68
NKX3-1-202ENST00000523261 Q8N1Y9 231 aa10.79□□□□□ -0.68
NKX3-1-202ENST00000523261 FAM71E2Q8N5Q1 922 aa10.79□□□□□ -0.68
NKX3-1-202ENST00000523261 OR11H1Q8NG94 326 aa10.79□□□□□ -0.68
NKX3-1-202ENST00000523261 ZNRF4Q8WWF5 429 aa10.79□□□□□ -0.68
NKX3-1-202ENST00000523261 HIST1H2AAQ96QV6 131 aa10.79□□□□□ -0.68
NKX3-1-202ENST00000523261 NRIP2Q9BQI9 281 aa10.79□□□□□ -0.68
NKX3-1-202ENST00000523261 OR10A2Q9H208 303 aa10.79□□□□□ -0.68
NKX3-1-202ENST00000523261 RGCCQ9H4X1 137 aa10.79□□□□□ -0.68
NKX3-1-202ENST00000523261 COMMD3-BMI1R4GMX3 469 aa10.79□□□□□ -0.68
NKX3-1-202ENST00000523261 UNC119BA6NIH7 251 aa10.78□□□□□ -0.68
NKX3-1-202ENST00000523261 LINC01548A6NM66 108 aa10.78□□□□□ -0.68
NKX3-1-202ENST00000523261 LEUTXA8MZ59 168 aa10.78□□□□□ -0.68
NKX3-1-202ENST00000523261 ANGPT2O15123 496 aa10.78□□□□□ -0.68
NKX3-1-202ENST00000523261 MMP23AO75900 390 aa10.78□□□□□ -0.68
NKX3-1-202ENST00000523261 IGLV1-47P01700 117 aa10.78□□□□□ -0.68
NKX3-1-202ENST00000523261 SPARCP09486 303 aa10.78□□□□□ -0.68
NKX3-1-202ENST00000523261 SLC15A1P46059 708 aa10.78□□□□□ -0.68
NKX3-1-202ENST00000523261 IDH3AP50213 366 aa10.78□□□□□ -0.68
NKX3-1-202ENST00000523261 ZNF121P58317 390 aaPredicted RBP10.78□□□□□ -0.68
NKX3-1-202ENST00000523261 MEF2CQ06413 473 aaPredicted RBP10.78□□□□□ -0.68
NKX3-1-202ENST00000523261 FOXE3Q13461 319 aa10.78□□□□□ -0.68
NKX3-1-202ENST00000523261 HAGHQ16775 308 aa10.78□□□□□ -0.68
NKX3-1-202ENST00000523261 FGD3Q5JSP0 725 aa10.78□□□□□ -0.68
NKX3-1-202ENST00000523261 VTCN1Q7Z7D3 282 aa10.78□□□□□ -0.68
NKX3-1-202ENST00000523261 RPP25LQ8N5L8 163 aaKnown RBP10.78□□□□□ -0.68
NKX3-1-202ENST00000523261 CCDC28BQ9BUN5 200 aa10.78□□□□□ -0.68
NKX3-1-202ENST00000523261 TMEM120AQ9BXJ8 343 aa10.78□□□□□ -0.68
NKX3-1-202ENST00000523261 ANKRD19PQ9H560 264 aa10.78□□□□□ -0.68
NKX3-1-202ENST00000523261 OR14J1Q9UGF5 321 aa10.78□□□□□ -0.68
NKX3-1-202ENST00000523261 FAM90A18PA6NE21 464 aa10.77□□□□□ -0.69
NKX3-1-202ENST00000523261 FAM90A16PA6NEW6 464 aa10.77□□□□□ -0.69
NKX3-1-202ENST00000523261 FAM90A20PA6NIJ5 464 aa10.77□□□□□ -0.69
NKX3-1-202ENST00000523261 FAM90A9PA6NNJ1 464 aa10.77□□□□□ -0.69
NKX3-1-202ENST00000523261 FAM90A12PA8MX19 464 aa10.77□□□□□ -0.69
NKX3-1-202ENST00000523261 FAM90A5PA8MXJ8 464 aa10.77□□□□□ -0.69
NKX3-1-202ENST00000523261 ZNF737O75373 536 aa10.77□□□□□ -0.69
NKX3-1-202ENST00000523261 SAP30O75446 220 aa10.77□□□□□ -0.69
NKX3-1-202ENST00000523261 OR8U8P0C7N1 319 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms