RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 TGM4P49221 684 aa4.99□□□□□ -1.61
VPS13B-211ENST00000522802 GSK3BP49841 420 aa4.99□□□□□ -1.61
VPS13B-211ENST00000522802 RPS6KA3P51812 740 aa4.99□□□□□ -1.61
VPS13B-211ENST00000522802 POLR2JP52435 117 aaKnown RBP4.99□□□□□ -1.61
VPS13B-211ENST00000522802 CRYBA2P53672 197 aa4.99□□□□□ -1.61
VPS13B-211ENST00000522802 RAP1BP61224 184 aa4.99□□□□□ -1.61
VPS13B-211ENST00000522802 RAP1AP62834 184 aa4.99□□□□□ -1.61
VPS13B-211ENST00000522802 HIST1H3AP68431 136 aa4.99□□□□□ -1.61
VPS13B-211ENST00000522802 SNAI3Q3KNW1 292 aa4.99□□□□□ -1.61
VPS13B-211ENST00000522802 HIST2H3PS2Q5TEC6 136 aa4.99□□□□□ -1.61
VPS13B-211ENST00000522802 WDR82Q6UXN9 313 aa4.99□□□□□ -1.61
VPS13B-211ENST00000522802 UNQ9370/PRO34162Q6UXP9 181 aa4.99□□□□□ -1.61
VPS13B-211ENST00000522802 HIST2H3AQ71DI3 136 aa4.99□□□□□ -1.61
VPS13B-211ENST00000522802 PGAP1Q75T13 922 aa4.99□□□□□ -1.61
VPS13B-211ENST00000522802 CENPVQ7Z7K6 275 aaPredicted RBP4.99□□□□□ -1.61
VPS13B-211ENST00000522802 C11orf53Q8IXP5 236 aa4.99□□□□□ -1.61
VPS13B-211ENST00000522802 OR4X2Q8NGF9 303 aa4.99□□□□□ -1.61
VPS13B-211ENST00000522802 OR5D13Q8NGL4 314 aa4.99□□□□□ -1.61
VPS13B-211ENST00000522802 OR13C2Q8NGS9 318 aa4.99□□□□□ -1.61
VPS13B-211ENST00000522802 MPLKIPQ8TAP9 179 aa4.99□□□□□ -1.61
VPS13B-211ENST00000522802 FNDC8Q8TC99 324 aa4.99□□□□□ -1.61
VPS13B-211ENST00000522802 RPS4Y2Q8TD47 263 aa4.99□□□□□ -1.61
VPS13B-211ENST00000522802 C2CD4CQ8TF44 421 aa4.99□□□□□ -1.61
VPS13B-211ENST00000522802 TMEM239Q8WW34 195 aa4.99□□□□□ -1.61
VPS13B-211ENST00000522802 TAMM41Q96BW9 452 aa4.99□□□□□ -1.61
VPS13B-211ENST00000522802 COQ7Q99807 217 aa4.99□□□□□ -1.61
VPS13B-211ENST00000522802 WACQ9BTA9 647 aa4.99□□□□□ -1.61
VPS13B-211ENST00000522802 MCRIP2Q9BUT9 160 aaKnown RBP4.99□□□□□ -1.61
VPS13B-211ENST00000522802 HDHD2Q9H0R4 259 aa4.99□□□□□ -1.61
VPS13B-211ENST00000522802 WDR13Q9H1Z4 485 aa4.99□□□□□ -1.61
VPS13B-211ENST00000522802 RERGLQ9H628 205 aa4.99□□□□□ -1.61
VPS13B-211ENST00000522802 TMEM38AQ9H6F2 299 aa4.99□□□□□ -1.61
VPS13B-211ENST00000522802 PPP1R3EQ9H7J1 279 aa4.99□□□□□ -1.61
VPS13B-211ENST00000522802 SDR39U1Q9NRG7 319 aaPredicted RBP4.99□□□□□ -1.61
VPS13B-211ENST00000522802 C19orf12Q9NSK7 152 aa4.99□□□□□ -1.61
VPS13B-211ENST00000522802 SNTG1Q9NSN8 517 aa4.99□□□□□ -1.61
VPS13B-211ENST00000522802 VAPAQ9P0L0 249 aa4.99□□□□□ -1.61
VPS13B-211ENST00000522802 SLC25A10Q9UBX3 287 aaPredicted RBP4.99□□□□□ -1.61
VPS13B-211ENST00000522802 ZNF391Q9UJN7 358 aa4.99□□□□□ -1.61
VPS13B-211ENST00000522802 RPS6KA6Q9UK32 745 aa4.99□□□□□ -1.61
VPS13B-211ENST00000522802 POLR1DQ9Y2S0 133 aa4.99□□□□□ -1.61
VPS13B-211ENST00000522802 RHODO00212 210 aa4.98□□□□□ -1.61
VPS13B-211ENST00000522802 POLR3GO15318 223 aaPredicted RBP4.98□□□□□ -1.61
VPS13B-211ENST00000522802 SLC16A7O60669 478 aa4.98□□□□□ -1.61
VPS13B-211ENST00000522802 RAMP3O60896 148 aa4.98□□□□□ -1.61
VPS13B-211ENST00000522802 FGF2P09038 288 aa4.98□□□□□ -1.61
VPS13B-211ENST00000522802 PAICSP22234 425 aaKnown RBP4.98□□□□□ -1.61
VPS13B-211ENST00000522802 RBM34P42696 430 aaKnown RBP4.98□□□□□ -1.61
VPS13B-211ENST00000522802 SLC9A3P48764 834 aa4.98□□□□□ -1.61
VPS13B-211ENST00000522802 RAB25P57735 213 aa4.98□□□□□ -1.61
VPS13B-211ENST00000522802 LSM6P62312 80 aaKnown RBP4.98□□□□□ -1.61
VPS13B-211ENST00000522802 ZNF92Q03936 586 aa4.98□□□□□ -1.61
VPS13B-211ENST00000522802 TRAP1Q12931 704 aaKnown RBP4.98□□□□□ -1.61
VPS13B-211ENST00000522802 WHAMMP3Q1A5X7 153 aa4.98□□□□□ -1.61
VPS13B-211ENST00000522802 GLYATL3Q5SZD4 288 aa4.98□□□□□ -1.61
VPS13B-211ENST00000522802 LRIF1Q5T3J3 769 aa4.98□□□□□ -1.61
VPS13B-211ENST00000522802 ASPHD1Q5U4P2 390 aa4.98□□□□□ -1.61
VPS13B-211ENST00000522802 KCTD18Q6PI47 426 aaPredicted RBP4.98□□□□□ -1.61
VPS13B-211ENST00000522802 OR2W3Q7Z3T1 314 aa4.98□□□□□ -1.61
VPS13B-211ENST00000522802 LINC00346Q8IVM7 164 aa4.98□□□□□ -1.61
VPS13B-211ENST00000522802 FAM185AQ8N0U4 392 aa4.98□□□□□ -1.61
VPS13B-211ENST00000522802 OR56B2PQ8NGI1 322 aa4.98□□□□□ -1.61
VPS13B-211ENST00000522802 OR9Q1Q8NGQ5 310 aa4.98□□□□□ -1.61
VPS13B-211ENST00000522802 OR51A7Q8NH64 312 aa4.98□□□□□ -1.61
VPS13B-211ENST00000522802 EME1Q96AY2 570 aa4.98□□□□□ -1.61
VPS13B-211ENST00000522802 C12orf43Q96C57 262 aaKnown RBP4.98□□□□□ -1.61
VPS13B-211ENST00000522802 Q96M85 177 aa4.98□□□□□ -1.61
VPS13B-211ENST00000522802 P2RX4Q99571 388 aa4.98□□□□□ -1.61
VPS13B-211ENST00000522802 SYT4Q9H2B2 425 aa4.98□□□□□ -1.61
VPS13B-211ENST00000522802 EDA2RQ9HAV5 297 aa4.98□□□□□ -1.61
VPS13B-211ENST00000522802 NOP16Q9Y3C1 178 aaKnown RBP4.98□□□□□ -1.61
VPS13B-211ENST00000522802 PRSS37A4D1T9 235 aa4.97□□□□□ -1.61
VPS13B-211ENST00000522802 FAM90A8PA6NJQ4 464 aa4.97□□□□□ -1.61
VPS13B-211ENST00000522802 F5H5K5 113 aa4.97□□□□□ -1.61
VPS13B-211ENST00000522802 M0QX08 132 aa4.97□□□□□ -1.61
VPS13B-211ENST00000522802 DCTN6O00399 190 aa4.97□□□□□ -1.61
VPS13B-211ENST00000522802 BHLHE40O14503 412 aa4.97□□□□□ -1.61
VPS13B-211ENST00000522802 SIGLEC5O15389 551 aa4.97□□□□□ -1.61
VPS13B-211ENST00000522802 OR5F1O95221 314 aa4.97□□□□□ -1.61
VPS13B-211ENST00000522802 LCATP04180 440 aa4.97□□□□□ -1.61
VPS13B-211ENST00000522802 SNRNP70P08621 437 aaKnown RBP4.97□□□□□ -1.61
VPS13B-211ENST00000522802 FRMD6-AS1P0C7T7 363 aa4.97□□□□□ -1.61
VPS13B-211ENST00000522802 CCL3L1P16619 93 aa4.97□□□□□ -1.61
VPS13B-211ENST00000522802 GPX2P18283 190 aa4.97□□□□□ -1.61
VPS13B-211ENST00000522802 POU1F1P28069 291 aa4.97□□□□□ -1.61
VPS13B-211ENST00000522802 GGT2P36268 569 aa4.97□□□□□ -1.61
VPS13B-211ENST00000522802 CEBPDP49716 269 aaPredicted RBP4.97□□□□□ -1.61
VPS13B-211ENST00000522802 CAV3P56539 151 aa4.97□□□□□ -1.61
VPS13B-211ENST00000522802 TAS2R41P59536 307 aa4.97□□□□□ -1.61
VPS13B-211ENST00000522802 RPL23AP62750 156 aaKnown RBP4.97□□□□□ -1.61
VPS13B-211ENST00000522802 KRR1Q13601 381 aaKnown RBP4.97□□□□□ -1.61
VPS13B-211ENST00000522802 TWIST1Q15672 202 aa4.97□□□□□ -1.61
VPS13B-211ENST00000522802 SSX2Q16385 188 aa4.97□□□□□ -1.61
VPS13B-211ENST00000522802 PAGE3Q5JUK9 113 aa4.97□□□□□ -1.61
VPS13B-211ENST00000522802 FAM122BQ7Z309 247 aa4.97□□□□□ -1.61
VPS13B-211ENST00000522802 IFT20Q8IY31 132 aa4.97□□□□□ -1.61
VPS13B-211ENST00000522802 C11orf42Q8N5U0 333 aa4.97□□□□□ -1.61
VPS13B-211ENST00000522802 TMEM217Q8N7C4 229 aa4.97□□□□□ -1.61
VPS13B-211ENST00000522802 NRACQ8N912 160 aa4.97□□□□□ -1.61
VPS13B-211ENST00000522802 ZNRF1Q8ND25 227 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms