RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 NMNAT3Q96T66 252 aa2.65□□□□□ -1.99
VPS13B-209ENST00000521559 GABARAPL3Q9BY60 117 aa2.65□□□□□ -1.99
VPS13B-209ENST00000521559 ULBP2Q9BZM5 246 aa2.65□□□□□ -1.99
VPS13B-209ENST00000521559 NMNAT2Q9BZQ4 307 aa2.65□□□□□ -1.99
VPS13B-209ENST00000521559 ACTR6Q9GZN1 396 aa2.65□□□□□ -1.99
VPS13B-209ENST00000521559 RIBC2Q9H4K1 309 aa2.65□□□□□ -1.99
VPS13B-209ENST00000521559 SIAEQ9HAT2 523 aa2.65□□□□□ -1.99
VPS13B-209ENST00000521559 CRLF2Q9HC73 371 aa2.65□□□□□ -1.99
VPS13B-209ENST00000521559 SLC17A5Q9NRA2 495 aa2.65□□□□□ -1.99
VPS13B-209ENST00000521559 GSN-AS1Q9NRJ2 163 aa2.65□□□□□ -1.99
VPS13B-209ENST00000521559 CMC2Q9NRP2 79 aa2.65□□□□□ -1.99
VPS13B-209ENST00000521559 TMEM38BQ9NVV0 291 aa2.65□□□□□ -1.99
VPS13B-209ENST00000521559 TVP23BQ9NYZ1 205 aa2.65□□□□□ -1.99
VPS13B-209ENST00000521559 B9D1Q9UPM9 204 aa2.65□□□□□ -1.99
VPS13B-209ENST00000521559 TMED3Q9Y3Q3 217 aa2.65□□□□□ -1.99
VPS13B-209ENST00000521559 UGT2A1Q9Y4X1 527 aa2.65□□□□□ -1.99
VPS13B-209ENST00000521559 ORC6Q9Y5N6 252 aa2.65□□□□□ -1.99
VPS13B-209ENST00000521559 FKBP7Q9Y680 259 aa2.65□□□□□ -1.99
VPS13B-209ENST00000521559 EPG5Q9HCE0 2579 aa2.65□□□□□ -1.99
VPS13B-209ENST00000521559 NUP214P35658 2090 aaPredicted RBP2.65□□□□□ -1.99
VPS13B-209ENST00000521559 ANKRD11Q6UB99 2663 aaPredicted RBP2.65□□□□□ -1.99
VPS13B-209ENST00000521559 CROCCQ5TZA2 2017 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 FRYQ5TBA9 3013 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 FREM2Q5SZK8 3169 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 ARPC4-TTLL3A0A0A6YYG9 625 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 IGLV1-36A0A0B4J1U3 117 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 LOC100130705A0A1B0GUX0 176 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 A0A1W2PPW3 197 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 FAM183AA6NL82 134 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 C12orf71A8MTZ7 269 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 H0YAE9 185 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 H0YJX3 145 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 H7C1C5 153 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 DCTN6O00399 190 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 DLGAP1O14490 977 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 CASKO14936 926 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 SURF4O15260 269 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 TLX2O43763 284 aaPredicted RBP2.64□□□□□ -1.99
VPS13B-209ENST00000521559 PRKYO43930 277 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 RAD51DO75771 328 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 CDK2AP2O75956 126 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 MPZL1O95297 269 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 FARS2O95363 451 aaKnown RBP2.64□□□□□ -1.99
VPS13B-209ENST00000521559 SLC2A10O95528 541 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 SNAP29O95721 258 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 COX6B1P14854 86 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 CBR1P16152 277 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 CTLA4P16410 223 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 ADRA2CP18825 462 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 NPR2P20594 1047 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 MSR1P21757 451 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 PAICSP22234 425 aaKnown RBP2.64□□□□□ -1.99
VPS13B-209ENST00000521559 LAP3P28838 519 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 PYCR1P32322 319 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 GGT2P36268 569 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 ARR3P36575 388 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 UBE2NP61088 152 aaKnown RBP2.64□□□□□ -1.99
VPS13B-209ENST00000521559 SNRPGP62308 76 aaKnown RBP2.64□□□□□ -1.99
VPS13B-209ENST00000521559 LSM6P62312 80 aaKnown RBP2.64□□□□□ -1.99
VPS13B-209ENST00000521559 LCN6P62502 163 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 FMODQ06828 376 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 RIGQ13278 110 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 CRMP1Q14194 572 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 PPA1Q15181 289 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 TAB1Q15750 504 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 SGCAQ16586 387 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 SLC36A2Q495M3 483 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 HIKESHIQ53FT3 197 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 TEX30Q5JUR7 227 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 SLC25A30Q5SVS4 291 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 LINC01590Q5TEZ4 76 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 FAM27BQ5VT28 67 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 AADACL4Q5VUY2 407 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 TTC23Q5W5X9 447 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 PLBD1Q6P4A8 553 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 SKA3Q8IX90 412 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 MMD2Q8IY49 270 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 OR6V1Q8N148 313 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 SLC22A24Q8N4F4 322 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 DHRSXQ8N5I4 330 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 TCEANCQ8N8B7 351 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 CYB561A3Q8NBI2 242 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 ZNF555Q8NEP9 628 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 SDR9C7Q8NEX9 313 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 SLC26A10Q8NG04 563 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 OR10G8Q8NGN5 311 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 OR8J1Q8NGP2 316 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 LINC01560Q8TB33 94 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 C11orf40Q8WZ69 217 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 S100PBPQ96BU1 408 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 MUCL1Q96DR8 90 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 PLEKHA8Q96JA3 519 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 FAM71F1Q96KD3 344 aaPredicted RBP2.64□□□□□ -1.99
VPS13B-209ENST00000521559 TSSK2Q96PF2 358 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 ALKBH3Q96Q83 286 aaPredicted RBP2.64□□□□□ -1.99
VPS13B-209ENST00000521559 IL4I1Q96RQ9 567 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 INTS14Q96SY0 518 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 PITX2Q99697 317 aa2.64□□□□□ -1.99
VPS13B-209ENST00000521559 NKX3-1Q99801 234 aaPredicted RBP2.64□□□□□ -1.99
VPS13B-209ENST00000521559 MED18Q9BUE0 208 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms