RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 RHOXF2Q9BQY4 288 aa2.12□□□□□ -2.07
HMGN1P28-201ENST00000521340 SIKE1Q9BRV8 207 aa2.12□□□□□ -2.07
HMGN1P28-201ENST00000521340 OSBPL11Q9BXB4 747 aa2.12□□□□□ -2.07
HMGN1P28-201ENST00000521340 TM6SF2Q9BZW4 377 aa2.12□□□□□ -2.07
HMGN1P28-201ENST00000521340 IFI27L2Q9H2X8 130 aa2.12□□□□□ -2.07
HMGN1P28-201ENST00000521340 OR51B5Q9H339 312 aa2.12□□□□□ -2.07
HMGN1P28-201ENST00000521340 OR52D1Q9H346 318 aa2.12□□□□□ -2.07
HMGN1P28-201ENST00000521340 HAUS4Q9H6D7 363 aa2.12□□□□□ -2.07
HMGN1P28-201ENST00000521340 ZDHHC4Q9NPG8 344 aa2.12□□□□□ -2.07
HMGN1P28-201ENST00000521340 MCUBQ9NWR8 336 aa2.12□□□□□ -2.07
HMGN1P28-201ENST00000521340 RMND1Q9NWS8 449 aa2.12□□□□□ -2.07
HMGN1P28-201ENST00000521340 TRMT112Q9UI30 125 aaKnown RBP2.12□□□□□ -2.07
HMGN1P28-201ENST00000521340 VAX2Q9UIW0 290 aa2.12□□□□□ -2.07
HMGN1P28-201ENST00000521340 GGA2Q9UJY4 613 aa2.12□□□□□ -2.07
HMGN1P28-201ENST00000521340 BZW2Q9Y6E2 419 aaKnown RBP2.12□□□□□ -2.07
HMGN1P28-201ENST00000521340 GREB1Q4ZG55 1949 aa2.12□□□□□ -2.07
HMGN1P28-201ENST00000521340 PLXNB2O15031 1838 aa2.12□□□□□ -2.07
HMGN1P28-201ENST00000521340 PATJQ8NI35 1801 aa2.12□□□□□ -2.07
HMGN1P28-201ENST00000521340 MYO18AQ92614 2054 aaKnown RBP2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 SMIM26A0A096LP01 95 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 A0A1W2PRF3 423 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 A0A1W2PRM7 423 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 KRBOX1C9JBD0 128 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 NVLO15381 856 aaKnown RBP2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 SNAI2O43623 268 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 HSBP1O75506 76 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 REM1O75628 298 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 SEMA3DO95025 777 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 GLAP06280 429 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 GNRHRP30968 328 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 SSTR5P35346 364 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 PPP1R2P41236 205 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 UBE2AP49459 152 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 VSX2P58304 361 aaPredicted RBP2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 UBE2NP61088 152 aaKnown RBP2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 DYNLL1P63167 89 aaKnown RBP2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 C2orf54Q08AI8 447 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 TCP10Q12799 353 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 ERCC8Q13216 396 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 GINS1Q14691 196 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 DEFB116Q30KQ4 102 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 ZCWPW2Q504Y3 356 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 TTMPQ5BVD1 217 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 FBXW9Q5XUX1 488 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 RWDD4Q6NW29 188 aaKnown RBP2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 SLC16A13Q7RTY0 426 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 FAM19A1Q7Z5A9 133 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 RAB43Q86YS6 212 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 BLIDQ8IZY5 108 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 WDR31Q8NA23 367 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 OR8K1Q8NGG5 319 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 NDNFQ8TB73 568 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 PTX4Q96A99 478 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 NTAN1Q96AB6 310 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 SMARCD1Q96GM5 515 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 ZBED3Q96IU2 234 aaPredicted RBP2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 SPZ1Q9BXG8 430 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 TSGA10Q9BZW7 698 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 PLEKHF2Q9H8W4 249 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 WFDC1Q9HC57 220 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 RGS18Q9NS28 235 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 RBFOX1Q9NWB1 397 aaKnown RBP2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 CES1P1Q9UKY3 287 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 SNX12Q9UMY4 172 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 TFR2Q9UP52 801 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 HYOU1Q9Y4L1 999 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 KLF12Q9Y4X4 402 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 MYO16Q9Y6X6 1858 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 ANKRD36A6QL64 1941 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 PTPRDP23468 1912 aa2.11□□□□□ -2.07
HMGN1P28-201ENST00000521340 IGHV3-72A0A0B4J1Y9 119 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 IGHV1-69DA0A0B4J2H0 117 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 VGLL3A8MV65 326 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 HACD1B0YJ81 288 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 TRIM49D1C9J1S8 452 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 H0YJW9 148 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 K7EN84 100 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 RFXANKO14593 260 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 POLR1CO15160 346 aaPredicted RBP2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 RRP8O43159 456 aaKnown RBP2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 CYTH3O43739 400 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 ZMPSTE24O75844 475 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 IGLV2-8P01709 118 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 TRBV12-3P01733 135 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 OR8U9P0C7N5 309 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 CCL2P13500 99 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 DRD3P35462 400 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 P2RY2P41231 377 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 RBM34P42696 430 aaKnown RBP2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 MNAT1P51948 309 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 AP1S2P56377 157 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 YWHAEP62258 255 aaKnown RBP2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 RPL23P62829 140 aaKnown RBP2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 PAFAH1B2P68402 229 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 LRRC63Q05C16 580 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 TMED1Q13445 227 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 ART3Q13508 389 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 TFDP2Q14188 446 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 IRF4Q15306 451 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 HSP90B2PQ58FF3 399 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms