RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 DNTTIP1Q9H147 329 aa17.11■□□□□ 0.33
TRIM35-203ENST00000521253 NUP50Q9UKX7 468 aa17.11■□□□□ 0.33
TRIM35-203ENST00000521253 SLC7A11Q9UPY5 501 aa17.11■□□□□ 0.33
TRIM35-203ENST00000521253 FAM230AA0A1W2PPH8 454 aa17.1■□□□□ 0.33
TRIM35-203ENST00000521253 NKX6-3A6NJ46 265 aa17.1■□□□□ 0.33
TRIM35-203ENST00000521253 OR2AT4A6NND4 320 aa17.1■□□□□ 0.33
TRIM35-203ENST00000521253 E9PI62 339 aa17.1■□□□□ 0.33
TRIM35-203ENST00000521253 H0YAE9 185 aa17.1■□□□□ 0.33
TRIM35-203ENST00000521253 SERPINA3P01011 423 aa17.1■□□□□ 0.33
TRIM35-203ENST00000521253 PGA5P0DJD9 388 aa17.1■□□□□ 0.33
TRIM35-203ENST00000521253 FGF12P61328 243 aa17.1■□□□□ 0.33
TRIM35-203ENST00000521253 ZNF788Q6ZQV5 615 aa17.1■□□□□ 0.33
TRIM35-203ENST00000521253 ANGPTL5Q86XS5 388 aa17.1■□□□□ 0.33
TRIM35-203ENST00000521253 CALHM1Q8IU99 346 aa17.1■□□□□ 0.33
TRIM35-203ENST00000521253 OR51A4Q8NGJ6 313 aa17.1■□□□□ 0.33
TRIM35-203ENST00000521253 OR10AC1Q8NH08 325 aa17.1■□□□□ 0.33
TRIM35-203ENST00000521253 ZNF418Q8TF45 676 aaPredicted RBP17.1■□□□□ 0.33
TRIM35-203ENST00000521253 GAFA1Q96PS6 74 aa17.1■□□□□ 0.33
TRIM35-203ENST00000521253 SLC6A7Q99884 636 aa17.1■□□□□ 0.33
TRIM35-203ENST00000521253 HHLA2Q9UM44 414 aa17.1■□□□□ 0.33
TRIM35-203ENST00000521253 POLDIP2Q9Y2S7 368 aa17.1■□□□□ 0.33
TRIM35-203ENST00000521253 IGKV1D-17A0A075B6S4 117 aa17.09■□□□□ 0.33
TRIM35-203ENST00000521253 A0A0A6YYJ9 748 aa17.09■□□□□ 0.33
TRIM35-203ENST00000521253 NDUFB3O43676 98 aa17.09■□□□□ 0.33
TRIM35-203ENST00000521253 NOS1APO75052 506 aaPredicted RBP17.09■□□□□ 0.33
TRIM35-203ENST00000521253 ECDO95905 644 aaPredicted RBP17.09■□□□□ 0.33
TRIM35-203ENST00000521253 LIPFP07098 398 aa17.09■□□□□ 0.33
TRIM35-203ENST00000521253 IGHV4-38-2P0DP08 117 aa17.09■□□□□ 0.33
TRIM35-203ENST00000521253 PSG2P11465 335 aa17.09■□□□□ 0.33
TRIM35-203ENST00000521253 MPZP25189 248 aa17.09■□□□□ 0.33
TRIM35-203ENST00000521253 DCKP27707 260 aa17.09■□□□□ 0.33
TRIM35-203ENST00000521253 SLC34A1Q06495 639 aa17.09■□□□□ 0.33
TRIM35-203ENST00000521253 MRPL28Q13084 256 aaKnown RBP17.09■□□□□ 0.33
TRIM35-203ENST00000521253 C11orf91Q3C1V1 193 aa17.09■□□□□ 0.33
TRIM35-203ENST00000521253 ACP7Q6ZNF0 438 aa17.09■□□□□ 0.33
TRIM35-203ENST00000521253 PHC2Q8IXK0 858 aa17.09■□□□□ 0.33
TRIM35-203ENST00000521253 BPIFB2Q8N4F0 458 aa17.09■□□□□ 0.33
TRIM35-203ENST00000521253 ZNF676Q8N7Q3 588 aa17.09■□□□□ 0.33
TRIM35-203ENST00000521253 PNLDC1Q8NA58 520 aaKnown RBP17.09■□□□□ 0.33
TRIM35-203ENST00000521253 PP6455Q8WZ26 134 aa17.09■□□□□ 0.33
TRIM35-203ENST00000521253 FGGYQ96C11 551 aa17.09■□□□□ 0.33
TRIM35-203ENST00000521253 NRIP2Q9BQI9 281 aa17.09■□□□□ 0.33
TRIM35-203ENST00000521253 PKIBQ9C010 78 aa17.09■□□□□ 0.33
TRIM35-203ENST00000521253 VCXQ9H320 206 aa17.09■□□□□ 0.33
TRIM35-203ENST00000521253 RASL12Q9NYN1 266 aa17.09■□□□□ 0.33
TRIM35-203ENST00000521253 ZNF69Q9UC07 566 aa17.09■□□□□ 0.33
TRIM35-203ENST00000521253 RPUSD1Q9UJJ7 312 aaKnown RBP17.09■□□□□ 0.33
TRIM35-203ENST00000521253 ZNF222Q9UK12 451 aa17.09■□□□□ 0.33
TRIM35-203ENST00000521253 HSPE1-MOB4S4R3N1 261 aa17.09■□□□□ 0.33
TRIM35-203ENST00000521253 IGKV1-27A0A075B6S5 117 aa17.08■□□□□ 0.32
TRIM35-203ENST00000521253 IGHV3OR16-10A0A075B7F0 116 aa17.08■□□□□ 0.32
TRIM35-203ENST00000521253 ZNF879B4DU55 563 aa17.08■□□□□ 0.32
TRIM35-203ENST00000521253 SIGLEC5O15389 551 aa17.08■□□□□ 0.32
TRIM35-203ENST00000521253 VENTXO95231 258 aa17.08■□□□□ 0.32
TRIM35-203ENST00000521253 ACAA1P09110 424 aaPredicted RBP17.08■□□□□ 0.32
TRIM35-203ENST00000521253 ZNF20P17024 532 aa17.08■□□□□ 0.32
TRIM35-203ENST00000521253 FPR2P25090 351 aa17.08■□□□□ 0.32
TRIM35-203ENST00000521253 GABRA2P47869 451 aa17.08■□□□□ 0.32
TRIM35-203ENST00000521253 ETV1P50549 477 aa17.08■□□□□ 0.32
TRIM35-203ENST00000521253 FUT6P51993 359 aa17.08■□□□□ 0.32
TRIM35-203ENST00000521253 GBX2P52951 348 aaPredicted RBP17.08■□□□□ 0.32
TRIM35-203ENST00000521253 IL13RA1P78552 427 aa17.08■□□□□ 0.32
TRIM35-203ENST00000521253 DGUOKQ16854 277 aa17.08■□□□□ 0.32
TRIM35-203ENST00000521253 LRRC10Q5BKY1 277 aa17.08■□□□□ 0.32
TRIM35-203ENST00000521253 USP43Q70EL4 1123 aa17.08■□□□□ 0.32
TRIM35-203ENST00000521253 C8orf59Q8N0T1 100 aaPredicted RBP17.08■□□□□ 0.32
TRIM35-203ENST00000521253 BATF2Q8N1L9 274 aa17.08■□□□□ 0.32
TRIM35-203ENST00000521253 MED30Q96HR3 178 aa17.08■□□□□ 0.32
TRIM35-203ENST00000521253 DIMT1Q9UNQ2 313 aaKnown RBP17.08■□□□□ 0.32
TRIM35-203ENST00000521253 TRAV40A0A0B4J280 105 aa17.07■□□□□ 0.32
TRIM35-203ENST00000521253 IGKV1-9A0A0C4DH69 117 aa17.07■□□□□ 0.32
TRIM35-203ENST00000521253 IRGMA1A4Y4 181 aa17.07■□□□□ 0.32
TRIM35-203ENST00000521253 ZFPL1O95159 310 aa17.07■□□□□ 0.32
TRIM35-203ENST00000521253 HILS1P60008 231 aa17.07■□□□□ 0.32
TRIM35-203ENST00000521253 IL24Q13007 206 aa17.07■□□□□ 0.32
TRIM35-203ENST00000521253 CNN3Q15417 329 aaKnown RBP17.07■□□□□ 0.32
TRIM35-203ENST00000521253 SMIM21Q3B7S5 101 aa17.07■□□□□ 0.32
TRIM35-203ENST00000521253 LAIR2Q6ISS4 152 aa17.07■□□□□ 0.32
TRIM35-203ENST00000521253 UTS2BQ765I0 119 aa17.07■□□□□ 0.32
TRIM35-203ENST00000521253 OR13C3Q8NGS6 347 aa17.07■□□□□ 0.32
TRIM35-203ENST00000521253 NRG4Q8WWG1 115 aa17.07■□□□□ 0.32
TRIM35-203ENST00000521253 BORCS8Q96FH0 119 aa17.07■□□□□ 0.32
TRIM35-203ENST00000521253 PDCD1LG2Q9BQ51 273 aa17.07■□□□□ 0.32
TRIM35-203ENST00000521253 PCGF1Q9BSM1 259 aa17.07■□□□□ 0.32
TRIM35-203ENST00000521253 SUCNR1Q9BXA5 334 aa17.07■□□□□ 0.32
TRIM35-203ENST00000521253 TMEM212A6NML5 194 aa17.06■□□□□ 0.32
TRIM35-203ENST00000521253 GPR37O15354 613 aa17.06■□□□□ 0.32
TRIM35-203ENST00000521253 NXPH2O95156 264 aa17.06■□□□□ 0.32
TRIM35-203ENST00000521253 SFTPBP07988 381 aa17.06■□□□□ 0.32
TRIM35-203ENST00000521253 CCDC159P0C7I6 412 aa17.06■□□□□ 0.32
TRIM35-203ENST00000521253 MMP9P14780 707 aa17.06■□□□□ 0.32
TRIM35-203ENST00000521253 GTF2A1P52655 376 aaPredicted RBP17.06■□□□□ 0.32
TRIM35-203ENST00000521253 OR2G6Q5TZ20 316 aa17.06■□□□□ 0.32
TRIM35-203ENST00000521253 BCL6BQ8N143 479 aaPredicted RBP17.06■□□□□ 0.32
TRIM35-203ENST00000521253 LY6G5BQ8NDX9 201 aa17.06■□□□□ 0.32
TRIM35-203ENST00000521253 HAVCR2Q8TDQ0 301 aa17.06■□□□□ 0.32
TRIM35-203ENST00000521253 TFAP2CQ92754 450 aa17.06■□□□□ 0.32
TRIM35-203ENST00000521253 SDSLQ96GA7 329 aa17.06■□□□□ 0.32
TRIM35-203ENST00000521253 HES4Q9HCC6 221 aa17.06■□□□□ 0.32
TRIM35-203ENST00000521253 SLC25A10Q9UBX3 287 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms