RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 UQCC2Q9BRT2 126 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 PIMREGQ9BSJ6 248 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 C1QTNF6Q9BXI9 259 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 KRTAP4-2Q9BYR5 136 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 DNTTIP1Q9H147 329 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 ZCCHC4Q9H5U6 513 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 PLEKHF2Q9H8W4 249 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 SCPEP1Q9HB40 452 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 BRD7Q9NPI1 651 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 PCDHB16Q9NRJ7 776 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 CENPMQ9NSP4 180 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 HAO2Q9NYQ3 351 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 PIPOXQ9P0Z9 390 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 ABRACLQ9P1F3 81 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 DUX4Q9UBX2 424 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 CYB5R1Q9UHQ9 305 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 DUSP13Q9UII6 198 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 GDF2Q9UK05 429 aaPredicted RBP4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 IKZF2Q9UKS7 526 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 PCNX3Q9H6A9 2034 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 TRAV1-2A0A0B4J238 106 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 LOC390937A0A1W2PQ73 354 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 OR6C68A6NDL8 312 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 GGT3PA6NGU5 568 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 ZNF98A6NK75 572 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 SNRPGP15A8MWD9 76 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 SHISA9B4DS77 424 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 MCRIP1C9JLW8 97 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 F5H5K5 113 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 H3BUI4 141 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 L7N2F9 121 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 DNASE2O00115 360 aaPredicted RBP4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 SSNA1O43805 119 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 SELENOFO60613 162 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 OR2A4O95047 310 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 SERPINA3P01011 423 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 LCATP04180 440 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 ANXA2P07355 339 aaKnown RBP4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 MMP7P09237 267 aaPredicted RBP4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 ZNF35P13682 527 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 FOSL1P15407 271 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 CELP19835 753 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 CXCL2P19875 107 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 CPT2P23786 658 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 GIFP27352 417 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 MAPK3P27361 379 aaPredicted RBP4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 NTF4P34130 210 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 CCR9P51686 369 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 TAS2R43P59537 309 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 TSPAN5P62079 268 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 NKX6-1P78426 367 aaPredicted RBP4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 MADCAM1Q13477 382 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 FHL1Q13642 323 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 SNTB1Q13884 538 aaKnown RBP4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 GGTLC2Q14390 218 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 TESK1Q15569 626 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 PHYHD1Q5SRE7 291 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 MBNL2Q5VZF2 373 aaKnown RBP4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 OLFML2AQ68BL7 652 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 ZNF774Q6NX45 483 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 SFXN4Q6P4A7 337 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 LYPD4Q6UWN0 246 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 PGAP1Q75T13 922 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 LINGO2Q7L985 606 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 NR2C2APQ86WQ0 139 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 SAMD12Q8N8I0 201 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 DTX3Q8N9I9 347 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 CYB561A3Q8NBI2 242 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 OR11L1Q8NGX0 322 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 OR13G1Q8NGZ3 307 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 OTOSQ8NHW6 89 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 THEM6Q8WUY1 208 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 SMIM4Q8WVI0 70 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 ASB13Q8WXK3 278 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 ERGIC1Q969X5 290 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 ORAI1Q96D31 301 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 SLAMF6Q96DU3 332 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 FBXO17Q96EF6 278 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 PGAM5Q96HS1 289 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 OR2A7Q96R45 310 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 GPA33Q99795 319 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 TMED9Q9BVK6 235 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 KRTAP4-9Q9BYQ8 210 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 PLA2G12AQ9BZM1 189 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 NMNAT2Q9BZQ4 307 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 COMMD4Q9H0A8 199 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 SAP30LQ9HAJ7 183 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 HINT3Q9NQE9 182 aaKnown RBP4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 BABAM2Q9NXR7 383 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 COPS3Q9UNS2 423 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 PLEKHA6Q9Y2H5 1048 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 PKDREJQ9NTG1 2253 aa4.86□□□□□ -1.63
CTNNA1-220ENST00000520260 NAV2Q8IVL1 2488 aa4.85□□□□□ -1.63
CTNNA1-220ENST00000520260 DAPL1A0PJW8 107 aa4.85□□□□□ -1.63
CTNNA1-220ENST00000520260 PQLC2LA1A4F0 135 aa4.85□□□□□ -1.63
CTNNA1-220ENST00000520260 E7EQL1 145 aa4.85□□□□□ -1.63
CTNNA1-220ENST00000520260 PDCD5O14737 125 aa4.85□□□□□ -1.63
CTNNA1-220ENST00000520260 PLPP2O43688 288 aa4.85□□□□□ -1.63
CTNNA1-220ENST00000520260 SULT1B1O43704 296 aa4.85□□□□□ -1.63
CTNNA1-220ENST00000520260 GMDSO60547 372 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms