RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 PTTG3PQ9NZH4 202 aa12.44□□□□□ -0.42
CLN8-204ENST00000519254 CRIM1Q9NZV1 1036 aa12.44□□□□□ -0.42
CLN8-204ENST00000519254 KCNN3Q9UGI6 736 aa12.44□□□□□ -0.42
CLN8-204ENST00000519254 RALYQ9UKM9 306 aaKnown RBP12.44□□□□□ -0.42
CLN8-204ENST00000519254 FLVCR2Q9UPI3 526 aa12.44□□□□□ -0.42
CLN8-204ENST00000519254 IGHV1-18A0A0C4DH31 117 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 C7orf66A4D0T2 115 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 A8MV72 311 aaPredicted RBP12.43□□□□□ -0.42
CLN8-204ENST00000519254 M0R1B8 84 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 ZG16O60844 167 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 IGKV3-15P01624 115 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 CECR9P0C854 216 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 AKAIN1P0CW23 69 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 MGMTP16455 207 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 SERPINA2P20848 420 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 RBP2P50120 134 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 MALLQ13021 153 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 SNTB1Q13884 538 aaKnown RBP12.43□□□□□ -0.42
CLN8-204ENST00000519254 ASCL4Q6XD76 172 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 LHFPL2Q6ZUX7 228 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 C22orf34Q6ZV56 151 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 TMEM229BQ8NBD8 167 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 OR56B4Q8NH76 319 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 BORCS8Q96FH0 119 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 CYYR1Q96J86 154 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 URM1Q9BTM9 101 aaKnown RBP12.43□□□□□ -0.42
CLN8-204ENST00000519254 C20orf85Q9H1P6 137 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 GHITMQ9H3K2 345 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 NEK6Q9HC98 313 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 NKIRAS2Q9NYR9 191 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 KCNK7Q9Y2U2 307 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 ZFYVE26Q68DK2 2539 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 ZNF850A8MQ14 1090 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 FOXI3A8MTJ6 420 aaPredicted RBP12.43□□□□□ -0.42
CLN8-204ENST00000519254 PYCARD-AS1I3L0S3 204 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 SPRY1O43609 319 aaPredicted RBP12.43□□□□□ -0.42
CLN8-204ENST00000519254 SSX5O60225 188 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 TMEM225BP0DP42 221 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 GRNP28799 593 aaKnown RBP12.43□□□□□ -0.42
CLN8-204ENST00000519254 FAUP35544 74 aaKnown RBP12.43□□□□□ -0.42
CLN8-204ENST00000519254 FUT6P51993 359 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 FAM189A2Q15884 450 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 ATAD3CQ5T2N8 411 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 PLCXD3Q63HM9 321 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 STEAP1BQ6NZ63 245 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 MRPL21Q7Z2W9 205 aaKnown RBP12.43□□□□□ -0.42
CLN8-204ENST00000519254 WFDC8Q8IUA0 241 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 OR56B1Q8NGI3 324 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 OR51T1Q8NGJ9 327 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 OR8S1Q8NH09 359 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 NUDCD2Q8WVJ2 157 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 RAB3CQ96E17 227 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 TECTBQ96PL2 329 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 S100A13Q99584 98 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 TM2D1Q9BX74 207 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 KCNJ16Q9NPI9 418 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 ZNF107Q9UII5 783 aaPredicted RBP12.43□□□□□ -0.42
CLN8-204ENST00000519254 GPR160Q9UJ42 338 aa12.43□□□□□ -0.42
CLN8-204ENST00000519254 ANGPTL7O43827 346 aa12.42□□□□□ -0.42
CLN8-204ENST00000519254 NDUFB6O95139 128 aa12.42□□□□□ -0.42
CLN8-204ENST00000519254 GSTP1P09211 210 aaKnown RBP12.42□□□□□ -0.42
CLN8-204ENST00000519254 HIST1H1DP16402 221 aaKnown RBP12.42□□□□□ -0.42
CLN8-204ENST00000519254 TAS2R19P59542 299 aa12.42□□□□□ -0.42
CLN8-204ENST00000519254 RRAS2P62070 204 aaPredicted RBP12.42□□□□□ -0.42
CLN8-204ENST00000519254 RFPL4BQ6ZWI9 263 aa12.42□□□□□ -0.42
CLN8-204ENST00000519254 TRAPPC6BQ86SZ2 158 aa12.42□□□□□ -0.42
CLN8-204ENST00000519254 CPNE2Q96FN4 548 aaPredicted RBP12.42□□□□□ -0.42
CLN8-204ENST00000519254 OR10A4Q9H209 315 aa12.42□□□□□ -0.42
CLN8-204ENST00000519254 ELL3Q9HB65 397 aaPredicted RBP12.42□□□□□ -0.42
CLN8-204ENST00000519254 SLC7A11Q9UPY5 501 aa12.42□□□□□ -0.42
CLN8-204ENST00000519254 ICMTO60725 284 aa12.41□□□□□ -0.42
CLN8-204ENST00000519254 PEX14O75381 377 aa12.41□□□□□ -0.42
CLN8-204ENST00000519254 CST4P01036 141 aa12.41□□□□□ -0.42
CLN8-204ENST00000519254 IGLV1-44P01699 117 aa12.41□□□□□ -0.42
CLN8-204ENST00000519254 CD74P04233 296 aa12.41□□□□□ -0.42
CLN8-204ENST00000519254 ATP1B3P54709 279 aa12.41□□□□□ -0.42
CLN8-204ENST00000519254 SPATA46Q5T0L3 261 aa12.41□□□□□ -0.42
CLN8-204ENST00000519254 ZNF782Q6ZMW2 699 aaPredicted RBP12.41□□□□□ -0.42
CLN8-204ENST00000519254 RNASE6Q93091 150 aaKnown RBP12.41□□□□□ -0.42
CLN8-204ENST00000519254 LRRC46Q96FV0 321 aa12.41□□□□□ -0.42
CLN8-204ENST00000519254 ARHGAP5-AS1Q96IT6 56 aa12.41□□□□□ -0.42
CLN8-204ENST00000519254 FGF23Q9GZV9 251 aaPredicted RBP12.41□□□□□ -0.42
CLN8-204ENST00000519254 METTL9Q9H1A3 318 aa12.41□□□□□ -0.42
CLN8-204ENST00000519254 OPA3Q9H6K4 179 aa12.41□□□□□ -0.42
CLN8-204ENST00000519254 EIF3KQ9UBQ5 218 aaKnown RBP12.41□□□□□ -0.42
CLN8-204ENST00000519254 ZNF221Q9UK13 617 aa12.41□□□□□ -0.42
CLN8-204ENST00000519254 IGKV1-12A0A0C4DH73 117 aa12.41□□□□□ -0.42
CLN8-204ENST00000519254 MFNGO00587 321 aa12.41□□□□□ -0.42
CLN8-204ENST00000519254 ARPC1BO15143 372 aaKnown RBP12.41□□□□□ -0.42
CLN8-204ENST00000519254 CYB5AP00167 134 aa12.41□□□□□ -0.42
CLN8-204ENST00000519254 PLATP00750 562 aa12.41□□□□□ -0.42
CLN8-204ENST00000519254 IGKV1D-12P01611 117 aa12.41□□□□□ -0.42
CLN8-204ENST00000519254 RCVRNP35243 200 aa12.41□□□□□ -0.42
CLN8-204ENST00000519254 PDZK1IP1Q13113 114 aa12.41□□□□□ -0.42
CLN8-204ENST00000519254 PRDX4Q13162 271 aa12.41□□□□□ -0.42
CLN8-204ENST00000519254 GVQW1Q8N7I0 195 aa12.41□□□□□ -0.42
CLN8-204ENST00000519254 CSNK2A3Q8NEV1 391 aa12.41□□□□□ -0.42
CLN8-204ENST00000519254 OR4S1Q8NGB4 309 aa12.41□□□□□ -0.42
CLN8-204ENST00000519254 OR51S1Q8NGJ8 323 aa12.41□□□□□ -0.42
CLN8-204ENST00000519254 GIMAP1Q8WWP7 306 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms