RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 SPSB1Q96BD6 273 aa21.68■■□□□ 1.06
DDR1-279ENST00000515529 CDCA4Q9BXL8 241 aa21.68■■□□□ 1.06
DDR1-279ENST00000515529 PKIBQ9C010 78 aa21.68■■□□□ 1.06
DDR1-279ENST00000515529 WDR13Q9H1Z4 485 aa21.68■■□□□ 1.06
DDR1-279ENST00000515529 ZCCHC4Q9H5U6 513 aa21.68■■□□□ 1.06
DDR1-279ENST00000515529 ZNF281Q9Y2X9 895 aa21.68■■□□□ 1.06
DDR1-279ENST00000515529 SONP18583 2426 aaKnown RBP21.67■■□□□ 1.06
DDR1-279ENST00000515529 NKX6-3A6NJ46 265 aa21.67■■□□□ 1.06
DDR1-279ENST00000515529 RGS10O43665 173 aa21.67■■□□□ 1.06
DDR1-279ENST00000515529 LALBAP00709 142 aa21.67■■□□□ 1.06
DDR1-279ENST00000515529 GATA3P23771 443 aa21.67■■□□□ 1.06
DDR1-279ENST00000515529 AZGP1P25311 298 aaKnown RBP21.67■■□□□ 1.06
DDR1-279ENST00000515529 ZFP36P26651 326 aaKnown RBP21.67■■□□□ 1.06
DDR1-279ENST00000515529 SOX2P48431 317 aa21.67■■□□□ 1.06
DDR1-279ENST00000515529 NPY4RP50391 375 aa21.67■■□□□ 1.06
DDR1-279ENST00000515529 MTCP1P56278 107 aa21.67■■□□□ 1.06
DDR1-279ENST00000515529 SLC35A2P78381 396 aa21.67■■□□□ 1.06
DDR1-279ENST00000515529 RBM48Q5RL73 367 aaKnown RBP21.67■■□□□ 1.06
DDR1-279ENST00000515529 SLC36A1Q7Z2H8 476 aa21.67■■□□□ 1.06
DDR1-279ENST00000515529 ANGPTL5Q86XS5 388 aa21.67■■□□□ 1.06
DDR1-279ENST00000515529 ZFP41Q8N8Y5 198 aa21.67■■□□□ 1.06
DDR1-279ENST00000515529 ZNF485Q8NCK3 441 aa21.67■■□□□ 1.06
DDR1-279ENST00000515529 RPS4Y2Q8TD47 263 aa21.67■■□□□ 1.06
DDR1-279ENST00000515529 CCDC90BQ9GZT6 254 aa21.67■■□□□ 1.06
DDR1-279ENST00000515529 SNTG1Q9NSN8 517 aa21.67■■□□□ 1.06
DDR1-279ENST00000515529 RASL12Q9NYN1 266 aa21.67■■□□□ 1.06
DDR1-279ENST00000515529 SIRT4Q9Y6E7 314 aaPredicted RBP21.67■■□□□ 1.06
DDR1-279ENST00000515529 PNMA8CA0A1B0GUJ8 204 aa21.66■■□□□ 1.06
DDR1-279ENST00000515529 A8MXK9 166 aa21.66■■□□□ 1.06
DDR1-279ENST00000515529 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP21.66■■□□□ 1.06
DDR1-279ENST00000515529 TMPRSS2O15393 492 aa21.66■■□□□ 1.06
DDR1-279ENST00000515529 SYNGR1O43759 233 aa21.66■■□□□ 1.06
DDR1-279ENST00000515529 CYB5AP00167 134 aa21.66■■□□□ 1.06
DDR1-279ENST00000515529 PLATP00750 562 aa21.66■■□□□ 1.06
DDR1-279ENST00000515529 CRHBPP24387 322 aa21.66■■□□□ 1.06
DDR1-279ENST00000515529 EEF1B2P24534 225 aaKnown RBP21.66■■□□□ 1.06
DDR1-279ENST00000515529 SMIM21Q3B7S5 101 aa21.66■■□□□ 1.06
DDR1-279ENST00000515529 DMKNQ6E0U4 476 aaPredicted RBP21.66■■□□□ 1.06
DDR1-279ENST00000515529 LHFPL2Q6ZUX7 228 aa21.66■■□□□ 1.06
DDR1-279ENST00000515529 POC1AQ8NBT0 407 aa21.66■■□□□ 1.06
DDR1-279ENST00000515529 GHSRQ92847 366 aa21.66■■□□□ 1.06
DDR1-279ENST00000515529 SEH1LQ96EE3 360 aa21.66■■□□□ 1.06
DDR1-279ENST00000515529 OPALINQ96PE5 141 aa21.66■■□□□ 1.06
DDR1-279ENST00000515529 PAK1IP1Q9NWT1 392 aaPredicted RBP21.66■■□□□ 1.06
DDR1-279ENST00000515529 NLKQ9UBE8 527 aa21.66■■□□□ 1.06
DDR1-279ENST00000515529 FN1P02751 2386 aaKnown RBP21.66■■□□□ 1.06
DDR1-279ENST00000515529 NXPH2O95156 264 aa21.65■■□□□ 1.06
DDR1-279ENST00000515529 MPZP25189 248 aa21.65■■□□□ 1.06
DDR1-279ENST00000515529 IL24Q13007 206 aa21.65■■□□□ 1.06
DDR1-279ENST00000515529 CALHM1Q8IU99 346 aa21.65■■□□□ 1.06
DDR1-279ENST00000515529 PARP16Q8N5Y8 322 aa21.65■■□□□ 1.06
DDR1-279ENST00000515529 OR5T2Q8NGG2 359 aa21.65■■□□□ 1.06
DDR1-279ENST00000515529 RGP1Q92546 391 aaPredicted RBP21.65■■□□□ 1.06
DDR1-279ENST00000515529 CCL13Q99616 98 aa21.65■■□□□ 1.06
DDR1-279ENST00000515529 DUSP21Q9H596 190 aa21.65■■□□□ 1.06
DDR1-279ENST00000515529 PPIAL4CA0A0B4J2A2 164 aa21.64■■□□□ 1.05
DDR1-279ENST00000515529 IGKV1-9A0A0C4DH69 117 aa21.64■■□□□ 1.05
DDR1-279ENST00000515529 J3QLI3 93 aa21.64■■□□□ 1.05
DDR1-279ENST00000515529 HCKP08631 526 aa21.64■■□□□ 1.05
DDR1-279ENST00000515529 PGA5P0DJD9 388 aa21.64■■□□□ 1.05
DDR1-279ENST00000515529 POU3F4P49335 361 aa21.64■■□□□ 1.05
DDR1-279ENST00000515529 BDH1Q02338 343 aa21.64■■□□□ 1.05
DDR1-279ENST00000515529 YIF1BQ5BJH7 314 aa21.64■■□□□ 1.05
DDR1-279ENST00000515529 WDR25Q64LD2 544 aaPredicted RBP21.64■■□□□ 1.05
DDR1-279ENST00000515529 STUMQ69YW2 141 aa21.64■■□□□ 1.05
DDR1-279ENST00000515529 IL17RELQ6ZVW7 336 aa21.64■■□□□ 1.05
DDR1-279ENST00000515529 TEX29Q8N6K0 151 aa21.64■■□□□ 1.05
DDR1-279ENST00000515529 SGCDQ92629 289 aa21.64■■□□□ 1.05
DDR1-279ENST00000515529 ZNF488Q96MN9 340 aa21.64■■□□□ 1.05
DDR1-279ENST00000515529 KAAG1Q9UBP8 84 aa21.64■■□□□ 1.05
DDR1-279ENST00000515529 CTSZQ9UBR2 303 aa21.64■■□□□ 1.05
DDR1-279ENST00000515529 POLR3KQ9Y2Y1 108 aaPredicted RBP21.64■■□□□ 1.05
DDR1-279ENST00000515529 OR2AT4A6NND4 320 aa21.63■■□□□ 1.05
DDR1-279ENST00000515529 KIAA1324LA8MWY0 1029 aaPredicted RBP21.63■■□□□ 1.05
DDR1-279ENST00000515529 TNFRSF13BO14836 293 aaPredicted RBP21.63■■□□□ 1.05
DDR1-279ENST00000515529 MAGEB3O15480 346 aa21.63■■□□□ 1.05
DDR1-279ENST00000515529 SULT1B1O43704 296 aa21.63■■□□□ 1.05
DDR1-279ENST00000515529 MT-ND2P03891 347 aa21.63■■□□□ 1.05
DDR1-279ENST00000515529 CELP19835 753 aa21.63■■□□□ 1.05
DDR1-279ENST00000515529 RAB3AP20336 220 aa21.63■■□□□ 1.05
DDR1-279ENST00000515529 SRP14P37108 136 aaKnown RBP21.63■■□□□ 1.05
DDR1-279ENST00000515529 GABRA2P47869 451 aa21.63■■□□□ 1.05
DDR1-279ENST00000515529 MED22Q15528 200 aa21.63■■□□□ 1.05
DDR1-279ENST00000515529 BTNL3Q6UXE8 466 aa21.63■■□□□ 1.05
DDR1-279ENST00000515529 SLC25A26Q70HW3 274 aa21.63■■□□□ 1.05
DDR1-279ENST00000515529 TMEM106AQ96A25 262 aa21.63■■□□□ 1.05
DDR1-279ENST00000515529 CPNE2Q96FN4 548 aaPredicted RBP21.63■■□□□ 1.05
DDR1-279ENST00000515529 DNTTIP1Q9H147 329 aa21.63■■□□□ 1.05
DDR1-279ENST00000515529 IGKV1-27A0A075B6S5 117 aa21.62■■□□□ 1.05
DDR1-279ENST00000515529 DENRO43583 198 aaKnown RBP21.62■■□□□ 1.05
DDR1-279ENST00000515529 NDUFB3O43676 98 aa21.62■■□□□ 1.05
DDR1-279ENST00000515529 NOS1APO75052 506 aaPredicted RBP21.62■■□□□ 1.05
DDR1-279ENST00000515529 PPP3R1P63098 170 aa21.62■■□□□ 1.05
DDR1-279ENST00000515529 SPHARQ15513 63 aa21.62■■□□□ 1.05
DDR1-279ENST00000515529 CD276Q5ZPR3 534 aa21.62■■□□□ 1.05
DDR1-279ENST00000515529 ACP7Q6ZNF0 438 aa21.62■■□□□ 1.05
DDR1-279ENST00000515529 PRSS48Q7RTY5 328 aa21.62■■□□□ 1.05
DDR1-279ENST00000515529 MKXQ8IYA7 352 aa21.62■■□□□ 1.05
DDR1-279ENST00000515529 ST8SIA4Q92187 359 aa21.62■■□□□ 1.05
DDR1-279ENST00000515529 SLAMF9Q96A28 289 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms