RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 SLC7A11Q9UPY5 501 aa10.59□□□□□ -0.71
CLCN3-210ENST00000515420 MYRFQ9Y2G1 1151 aa10.59□□□□□ -0.71
CLCN3-210ENST00000515420 H0YAE9 185 aa10.58□□□□□ -0.72
CLCN3-210ENST00000515420 J3QLW9 94 aa10.58□□□□□ -0.72
CLCN3-210ENST00000515420 MMP9P14780 707 aa10.58□□□□□ -0.72
CLCN3-210ENST00000515420 ZNF19P17023 458 aa10.58□□□□□ -0.72
CLCN3-210ENST00000515420 AMY2BP19961 511 aa10.58□□□□□ -0.72
CLCN3-210ENST00000515420 DCKP27707 260 aa10.58□□□□□ -0.72
CLCN3-210ENST00000515420 FUT6P51993 359 aa10.58□□□□□ -0.72
CLCN3-210ENST00000515420 NANOS3P60323 173 aaKnown RBP10.58□□□□□ -0.72
CLCN3-210ENST00000515420 FGF12P61328 243 aa10.58□□□□□ -0.72
CLCN3-210ENST00000515420 ADARB1P78563 741 aaKnown RBP10.58□□□□□ -0.72
CLCN3-210ENST00000515420 IL24Q13007 206 aa10.58□□□□□ -0.72
CLCN3-210ENST00000515420 ALKBH1Q13686 389 aaKnown RBP10.58□□□□□ -0.72
CLCN3-210ENST00000515420 CNN3Q15417 329 aaKnown RBP10.58□□□□□ -0.72
CLCN3-210ENST00000515420 DMRTC1Q5HYR2 192 aa10.58□□□□□ -0.72
CLCN3-210ENST00000515420 ACP7Q6ZNF0 438 aa10.58□□□□□ -0.72
CLCN3-210ENST00000515420 LHFPL3Q86UP9 236 aa10.58□□□□□ -0.72
CLCN3-210ENST00000515420 KIR3DL3Q8N743 410 aa10.58□□□□□ -0.72
CLCN3-210ENST00000515420 FAM216BQ8N7L0 139 aa10.58□□□□□ -0.72
CLCN3-210ENST00000515420 LY6G5BQ8NDX9 201 aa10.58□□□□□ -0.72
CLCN3-210ENST00000515420 DNAAF1Q8NEP3 725 aa10.58□□□□□ -0.72
CLCN3-210ENST00000515420 OR52I1Q8NGK6 324 aa10.58□□□□□ -0.72
CLCN3-210ENST00000515420 CYGBQ8WWM9 190 aa10.58□□□□□ -0.72
CLCN3-210ENST00000515420 ST8SIA4Q92187 359 aa10.58□□□□□ -0.72
CLCN3-210ENST00000515420 SEH1LQ96EE3 360 aa10.58□□□□□ -0.72
CLCN3-210ENST00000515420 GAFA1Q96PS6 74 aa10.58□□□□□ -0.72
CLCN3-210ENST00000515420 SLC6A7Q99884 636 aa10.58□□□□□ -0.72
CLCN3-210ENST00000515420 NRIP2Q9BQI9 281 aa10.58□□□□□ -0.72
CLCN3-210ENST00000515420 C19orf24Q9BVV8 132 aa10.58□□□□□ -0.72
CLCN3-210ENST00000515420 VCXQ9H320 206 aa10.58□□□□□ -0.72
CLCN3-210ENST00000515420 HES4Q9HCC6 221 aa10.58□□□□□ -0.72
CLCN3-210ENST00000515420 AMBNQ9NP70 447 aa10.58□□□□□ -0.72
CLCN3-210ENST00000515420 ZNF222Q9UK12 451 aa10.58□□□□□ -0.72
CLCN3-210ENST00000515420 KPTNQ9Y664 436 aa10.58□□□□□ -0.72
CLCN3-210ENST00000515420 DNHD1Q96M86 4753 aa10.58□□□□□ -0.72
CLCN3-210ENST00000515420 IGKV1D-17A0A075B6S4 117 aa10.57□□□□□ -0.72
CLCN3-210ENST00000515420 TRAV40A0A0B4J280 105 aa10.57□□□□□ -0.72
CLCN3-210ENST00000515420 TMEM212A6NML5 194 aa10.57□□□□□ -0.72
CLCN3-210ENST00000515420 OR4C45A6NMZ5 311 aa10.57□□□□□ -0.72
CLCN3-210ENST00000515420 TRIM77I1YAP6 450 aa10.57□□□□□ -0.72
CLCN3-210ENST00000515420 VENTXO95231 258 aa10.57□□□□□ -0.72
CLCN3-210ENST00000515420 CCDC159P0C7I6 412 aa10.57□□□□□ -0.72
CLCN3-210ENST00000515420 PSG2P11465 335 aa10.57□□□□□ -0.72
CLCN3-210ENST00000515420 ERVK11-1P61568 191 aa10.57□□□□□ -0.72
CLCN3-210ENST00000515420 PDCD1Q15116 288 aa10.57□□□□□ -0.72
CLCN3-210ENST00000515420 UBE2V2Q15819 145 aa10.57□□□□□ -0.72
CLCN3-210ENST00000515420 METTL11BQ5VVY1 283 aa10.57□□□□□ -0.72
CLCN3-210ENST00000515420 OR5T2Q8NGG2 359 aa10.57□□□□□ -0.72
CLCN3-210ENST00000515420 BORCS8Q96FH0 119 aa10.57□□□□□ -0.72
CLCN3-210ENST00000515420 SDSLQ96GA7 329 aa10.57□□□□□ -0.72
CLCN3-210ENST00000515420 WDFY2Q96P53 400 aa10.57□□□□□ -0.72
CLCN3-210ENST00000515420 DCTN5Q9BTE1 182 aa10.57□□□□□ -0.72
CLCN3-210ENST00000515420 MS4A7Q9GZW8 240 aaPredicted RBP10.57□□□□□ -0.72
CLCN3-210ENST00000515420 SIRPDQ9H106 197 aa10.57□□□□□ -0.72
CLCN3-210ENST00000515420 RASSF4Q9H2L5 321 aa10.57□□□□□ -0.72
CLCN3-210ENST00000515420 CNTD2Q9H8S5 307 aa10.57□□□□□ -0.72
CLCN3-210ENST00000515420 ZMAT3Q9HA38 289 aaKnown RBP10.57□□□□□ -0.72
CLCN3-210ENST00000515420 SNTG1Q9NSN8 517 aa10.57□□□□□ -0.72
CLCN3-210ENST00000515420 SLC25A10Q9UBX3 287 aaPredicted RBP10.57□□□□□ -0.72
CLCN3-210ENST00000515420 ZNF69Q9UC07 566 aa10.57□□□□□ -0.72
CLCN3-210ENST00000515420 STAB1Q9NY15 2570 aa10.56□□□□□ -0.72
CLCN3-210ENST00000515420 A0A1B0GW55 424 aa10.56□□□□□ -0.72
CLCN3-210ENST00000515420 A6NIN4 97 aa10.56□□□□□ -0.72
CLCN3-210ENST00000515420 SYNGR1O43759 233 aa10.56□□□□□ -0.72
CLCN3-210ENST00000515420 TOX4O94842 621 aa10.56□□□□□ -0.72
CLCN3-210ENST00000515420 DUX4L2P0CJ85 424 aa10.56□□□□□ -0.72
CLCN3-210ENST00000515420 DUX4L3P0CJ86 424 aa10.56□□□□□ -0.72
CLCN3-210ENST00000515420 DUX4L4P0CJ87 422 aa10.56□□□□□ -0.72
CLCN3-210ENST00000515420 DUX4L5P0CJ88 424 aa10.56□□□□□ -0.72
CLCN3-210ENST00000515420 DUX4L6P0CJ89 424 aa10.56□□□□□ -0.72
CLCN3-210ENST00000515420 DUX4L7P0CJ90 424 aa10.56□□□□□ -0.72
CLCN3-210ENST00000515420 LIMS3P0CW19 117 aa10.56□□□□□ -0.72
CLCN3-210ENST00000515420 LIMS4P0CW20 117 aa10.56□□□□□ -0.72
CLCN3-210ENST00000515420 IGHV4-38-2P0DP08 117 aa10.56□□□□□ -0.72
CLCN3-210ENST00000515420 ZNF20P17024 532 aa10.56□□□□□ -0.72
CLCN3-210ENST00000515420 PRKACBP22694 351 aa10.56□□□□□ -0.72
CLCN3-210ENST00000515420 CAPGP40121 348 aa10.56□□□□□ -0.72
CLCN3-210ENST00000515420 RBP2P50120 134 aa10.56□□□□□ -0.72
CLCN3-210ENST00000515420 GBX2P52951 348 aaPredicted RBP10.56□□□□□ -0.72
CLCN3-210ENST00000515420 GMFBP60983 142 aa10.56□□□□□ -0.72
CLCN3-210ENST00000515420 ELF3P78545 371 aaPredicted RBP10.56□□□□□ -0.72
CLCN3-210ENST00000515420 IKZF1Q13422 519 aa10.56□□□□□ -0.72
CLCN3-210ENST00000515420 MED21Q13503 144 aa10.56□□□□□ -0.72
CLCN3-210ENST00000515420 SMN1Q16637 294 aaKnown RBP10.56□□□□□ -0.72
CLCN3-210ENST00000515420 CCDC58Q4VC31 144 aa10.56□□□□□ -0.72
CLCN3-210ENST00000515420 GPR157Q5UAW9 335 aa10.56□□□□□ -0.72
CLCN3-210ENST00000515420 DUX4L9Q6RFH8 374 aaPredicted RBP10.56□□□□□ -0.72
CLCN3-210ENST00000515420 RBMS3Q6XE24 437 aaKnown RBP10.56□□□□□ -0.72
CLCN3-210ENST00000515420 CALHM1Q8IU99 346 aa10.56□□□□□ -0.72
CLCN3-210ENST00000515420 Q8IYB0 196 aa10.56□□□□□ -0.72
CLCN3-210ENST00000515420 CMTM4Q8IZR5 234 aa10.56□□□□□ -0.72
CLCN3-210ENST00000515420 RDH10Q8IZV5 341 aa10.56□□□□□ -0.72
CLCN3-210ENST00000515420 ZNF561Q8N587 486 aa10.56□□□□□ -0.72
CLCN3-210ENST00000515420 ZNF676Q8N7Q3 588 aa10.56□□□□□ -0.72
CLCN3-210ENST00000515420 CNIH3Q8TBE1 160 aa10.56□□□□□ -0.72
CLCN3-210ENST00000515420 FAM216AQ8WUB2 273 aa10.56□□□□□ -0.72
CLCN3-210ENST00000515420 SPSB1Q96BD6 273 aa10.56□□□□□ -0.72
CLCN3-210ENST00000515420 ADAT3Q96EY9 351 aaPredicted RBP10.56□□□□□ -0.72
CLCN3-210ENST00000515420 COMMD4Q9H0A8 199 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms