RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 HPSE2Q8WWQ2 592 aa12.87□□□□□ -0.35
VCAN-211ENST00000513984 FBXW5Q969U6 566 aa12.87□□□□□ -0.35
VCAN-211ENST00000513984 ZNF69Q9UC07 566 aa12.87□□□□□ -0.35
VCAN-211ENST00000513984 PAIP2BQ9ULR5 123 aaKnown RBP12.87□□□□□ -0.35
VCAN-211ENST00000513984 HSF4Q9ULV5 492 aa12.87□□□□□ -0.35
VCAN-211ENST00000513984 CD300LBA8K4G0 201 aa12.86□□□□□ -0.35
VCAN-211ENST00000513984 SMLR1H3BR10 107 aa12.86□□□□□ -0.35
VCAN-211ENST00000513984 TPOP07202 933 aa12.86□□□□□ -0.35
VCAN-211ENST00000513984 GABRR1P24046 479 aa12.86□□□□□ -0.35
VCAN-211ENST00000513984 CXADRP78310 365 aa12.86□□□□□ -0.35
VCAN-211ENST00000513984 IFITM2Q01629 132 aa12.86□□□□□ -0.35
VCAN-211ENST00000513984 NKPD1Q17RQ9 610 aa12.86□□□□□ -0.35
VCAN-211ENST00000513984 PLEKHN1Q494U1 663 aaPredicted RBP12.86□□□□□ -0.35
VCAN-211ENST00000513984 SCGB2B2Q4G0G5 96 aa12.86□□□□□ -0.35
VCAN-211ENST00000513984 VAX1Q5SQQ9 334 aa12.86□□□□□ -0.35
VCAN-211ENST00000513984 ATPAF1Q5TC12 328 aaPredicted RBP12.86□□□□□ -0.35
VCAN-211ENST00000513984 SIGIRRQ6IA17 410 aa12.86□□□□□ -0.35
VCAN-211ENST00000513984 SEM1Q6ZVN7 128 aa12.86□□□□□ -0.35
VCAN-211ENST00000513984 MYPOPQ86VE0 399 aaPredicted RBP12.86□□□□□ -0.35
VCAN-211ENST00000513984 HOGA1Q86XE5 327 aa12.86□□□□□ -0.35
VCAN-211ENST00000513984 CALHM1Q8IU99 346 aa12.86□□□□□ -0.35
VCAN-211ENST00000513984 SPACA3Q8IXA5 215 aa12.86□□□□□ -0.35
VCAN-211ENST00000513984 OR4K15Q8NH41 348 aa12.86□□□□□ -0.35
VCAN-211ENST00000513984 CCDC107Q8WV48 283 aa12.86□□□□□ -0.35
VCAN-211ENST00000513984 CAPSLQ8WWF8 208 aa12.86□□□□□ -0.35
VCAN-211ENST00000513984 HYLS1Q96M11 299 aa12.86□□□□□ -0.35
VCAN-211ENST00000513984 FGF23Q9GZV9 251 aaPredicted RBP12.86□□□□□ -0.35
VCAN-211ENST00000513984 PCDHB16Q9NRJ7 776 aa12.86□□□□□ -0.35
VCAN-211ENST00000513984 SPENQ96T58 3664 aaKnown RBP12.86□□□□□ -0.35
VCAN-211ENST00000513984 DCHS1Q96JQ0 3298 aa12.86□□□□□ -0.35
VCAN-211ENST00000513984 FIGNL2A6NMB9 653 aa12.85□□□□□ -0.35
VCAN-211ENST00000513984 GFRA3O60609 400 aa12.85□□□□□ -0.35
VCAN-211ENST00000513984 CSN2P05814 226 aa12.85□□□□□ -0.35
VCAN-211ENST00000513984 CELA3BP08861 270 aa12.85□□□□□ -0.35
VCAN-211ENST00000513984 CDK10Q15131 360 aa12.85□□□□□ -0.35
VCAN-211ENST00000513984 MICBQ29980 383 aa12.85□□□□□ -0.35
VCAN-211ENST00000513984 OSR2Q8N2R0 312 aa12.85□□□□□ -0.35
VCAN-211ENST00000513984 ZNF611Q8N823 705 aa12.85□□□□□ -0.35
VCAN-211ENST00000513984 Q8NFD4 153 aa12.85□□□□□ -0.35
VCAN-211ENST00000513984 OR52B4Q8NGK2 314 aa12.85□□□□□ -0.35
VCAN-211ENST00000513984 OR51F2Q8NH61 342 aa12.85□□□□□ -0.35
VCAN-211ENST00000513984 ZFAND1Q8TCF1 268 aa12.85□□□□□ -0.35
VCAN-211ENST00000513984 MRGPRFQ96AM1 343 aa12.85□□□□□ -0.35
VCAN-211ENST00000513984 POM121Q96HA1 1249 aa12.85□□□□□ -0.35
VCAN-211ENST00000513984 ZNF436Q9C0F3 470 aaPredicted RBP12.85□□□□□ -0.35
VCAN-211ENST00000513984 CHST6Q9GZX3 395 aa12.85□□□□□ -0.35
VCAN-211ENST00000513984 DLL4Q9NR61 685 aa12.85□□□□□ -0.35
VCAN-211ENST00000513984 UBE2QL1A1L167 161 aa12.85□□□□□ -0.35
VCAN-211ENST00000513984 WDR1O75083 606 aa12.85□□□□□ -0.35
VCAN-211ENST00000513984 CGAP01215 116 aa12.85□□□□□ -0.35
VCAN-211ENST00000513984 CRHP06850 196 aa12.85□□□□□ -0.35
VCAN-211ENST00000513984 SFTPBP07988 381 aa12.85□□□□□ -0.35
VCAN-211ENST00000513984 PTGER4P35408 488 aa12.85□□□□□ -0.35
VCAN-211ENST00000513984 IDH3GP51553 393 aaPredicted RBP12.85□□□□□ -0.35
VCAN-211ENST00000513984 MRPL49Q13405 166 aaKnown RBP12.85□□□□□ -0.35
VCAN-211ENST00000513984 TAF9Q16594 264 aa12.85□□□□□ -0.35
VCAN-211ENST00000513984 FBXW12Q6X9E4 464 aa12.85□□□□□ -0.35
VCAN-211ENST00000513984 C6orf201Q7Z4U5 140 aa12.85□□□□□ -0.35
VCAN-211ENST00000513984 SAXO1Q8IYX7 474 aa12.85□□□□□ -0.35
VCAN-211ENST00000513984 ARRDC1Q8N5I2 433 aa12.85□□□□□ -0.35
VCAN-211ENST00000513984 ZDHHC22Q8N966 263 aa12.85□□□□□ -0.35
VCAN-211ENST00000513984 EMG1Q92979 244 aaKnown RBP12.85□□□□□ -0.35
VCAN-211ENST00000513984 STARD4Q96DR4 205 aa12.85□□□□□ -0.35
VCAN-211ENST00000513984 RANBP3Q9H6Z4 567 aaPredicted RBP12.85□□□□□ -0.35
VCAN-211ENST00000513984 PLEKHJ1Q9NW61 149 aa12.85□□□□□ -0.35
VCAN-211ENST00000513984 A0A1W2PR80 420 aa12.84□□□□□ -0.35
VCAN-211ENST00000513984 SMPD2O60906 423 aa12.84□□□□□ -0.35
VCAN-211ENST00000513984 PMP2P02689 132 aa12.84□□□□□ -0.35
VCAN-211ENST00000513984 IFNA6P05013 189 aa12.84□□□□□ -0.35
VCAN-211ENST00000513984 CBR1P16152 277 aa12.84□□□□□ -0.35
VCAN-211ENST00000513984 CHATP28329 748 aa12.84□□□□□ -0.35
VCAN-211ENST00000513984 PER3P56645 1201 aa12.84□□□□□ -0.35
VCAN-211ENST00000513984 EIF2S3LQ2VIR3 472 aaKnown RBP12.84□□□□□ -0.35
VCAN-211ENST00000513984 SLC25A26Q70HW3 274 aa12.84□□□□□ -0.35
VCAN-211ENST00000513984 MUC20Q8N307 709 aaPredicted RBP12.84□□□□□ -0.35
VCAN-211ENST00000513984 WDR31Q8NA23 367 aa12.84□□□□□ -0.35
VCAN-211ENST00000513984 OR5A2Q8NGI9 324 aa12.84□□□□□ -0.35
VCAN-211ENST00000513984 CDH20Q9HBT6 801 aa12.84□□□□□ -0.35
VCAN-211ENST00000513984 MGAT4CQ9UBM8 478 aa12.84□□□□□ -0.35
VCAN-211ENST00000513984 ZNF629Q9UEG4 869 aaPredicted RBP12.84□□□□□ -0.35
VCAN-211ENST00000513984 PROCRQ9UNN8 238 aa12.84□□□□□ -0.35
VCAN-211ENST00000513984 VSIG4Q9Y279 399 aa12.84□□□□□ -0.35
VCAN-211ENST00000513984 MPC1Q9Y5U8 109 aa12.84□□□□□ -0.35
VCAN-211ENST00000513984 MGAQ8IWI9 3026 aa12.84□□□□□ -0.35
VCAN-211ENST00000513984 FAM172BPA6NC97 362 aa12.83□□□□□ -0.35
VCAN-211ENST00000513984 OR2AT4A6NND4 320 aa12.83□□□□□ -0.35
VCAN-211ENST00000513984 ANKRD30BLA7E2S9 258 aa12.83□□□□□ -0.35
VCAN-211ENST00000513984 RGS13O14921 159 aa12.83□□□□□ -0.35
VCAN-211ENST00000513984 TOXO94900 526 aa12.83□□□□□ -0.35
VCAN-211ENST00000513984 IGKV3-15P01624 115 aa12.83□□□□□ -0.35
VCAN-211ENST00000513984 OR4E1P0C645 316 aa12.83□□□□□ -0.35
VCAN-211ENST00000513984 AMY2BP19961 511 aa12.83□□□□□ -0.35
VCAN-211ENST00000513984 HOXC12P31275 282 aa12.83□□□□□ -0.35
VCAN-211ENST00000513984 GPM6AP51674 278 aa12.83□□□□□ -0.35
VCAN-211ENST00000513984 RBM11P57052 281 aaKnown RBP12.83□□□□□ -0.35
VCAN-211ENST00000513984 TAS2R46P59540 309 aa12.83□□□□□ -0.35
VCAN-211ENST00000513984 TSC22D1Q15714 1073 aa12.83□□□□□ -0.35
VCAN-211ENST00000513984 PIGYQ3MUY2 71 aa12.83□□□□□ -0.35
VCAN-211ENST00000513984 KRTCAP3Q53RY4 240 aa12.83□□□□□ -0.35
VCAN-211ENST00000513984 NKAPLQ5M9Q1 402 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms