RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 ACSM1Q08AH1 577 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 RBM48Q5RL73 367 aaKnown RBP7.33□□□□□ -1.24
NUP54-211ENST00000512151 LINC01590Q5TEZ4 76 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 AADACL4Q5VUY2 407 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 PLBD1Q6P4A8 553 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 C10orf99Q6UWK7 81 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 LYPD4Q6UWN0 246 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 FOXL2NBQ6ZUU3 175 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 THAP5Q7Z6K1 395 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 ADCK1Q86TW2 530 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 ZBTB46Q86UZ6 589 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 TMEM219Q86XT9 240 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 C8orf59Q8N0T1 100 aaPredicted RBP7.33□□□□□ -1.24
NUP54-211ENST00000512151 ZNF555Q8NEP9 628 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 OR51L1Q8NGJ5 315 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 TMEM163Q8TC26 289 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 APH1BQ8WW43 257 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 RBP7Q96R05 134 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 CITED4Q96RK1 184 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 GPR61Q9BZJ8 451 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 FAM234AQ9H0X4 552 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 WDR76Q9H967 626 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 EMC7Q9NPA0 242 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 COA3Q9Y2R0 106 aaPredicted RBP7.33□□□□□ -1.24
NUP54-211ENST00000512151 TSSC4Q9Y5U2 329 aaPredicted RBP7.33□□□□□ -1.24
NUP54-211ENST00000512151 HECTD4Q9Y4D8 3996 aa7.32□□□□□ -1.24
NUP54-211ENST00000512151 TRBV23-1A0A0A0MS06 115 aa7.32□□□□□ -1.24
NUP54-211ENST00000512151 TRAV38-1A0A0B4J264 116 aa7.32□□□□□ -1.24
NUP54-211ENST00000512151 CCDC182A6NF36 153 aa7.32□□□□□ -1.24
NUP54-211ENST00000512151 NKX6-3A6NJ46 265 aa7.32□□□□□ -1.24
NUP54-211ENST00000512151 RIIAD1A6NNX1 92 aa7.32□□□□□ -1.24
NUP54-211ENST00000512151 PRR23D1E9PI22 279 aaPredicted RBP7.32□□□□□ -1.24
NUP54-211ENST00000512151 ZNF701M0R085 212 aaPredicted RBP7.32□□□□□ -1.24
NUP54-211ENST00000512151 NDUFA2O43678 99 aa7.32□□□□□ -1.24
NUP54-211ENST00000512151 WBP4O75554 376 aaKnown RBP7.32□□□□□ -1.24
NUP54-211ENST00000512151 RENP00797 406 aa7.32□□□□□ -1.24
NUP54-211ENST00000512151 IFNGP01579 166 aa7.32□□□□□ -1.24
NUP54-211ENST00000512151 PRR23D2P0DMB1 279 aaPredicted RBP7.32□□□□□ -1.24
NUP54-211ENST00000512151 PSKH1P11801 424 aa7.32□□□□□ -1.24
NUP54-211ENST00000512151 SELLP14151 372 aa7.32□□□□□ -1.24
NUP54-211ENST00000512151 ZNF3P17036 446 aa7.32□□□□□ -1.24
NUP54-211ENST00000512151 SPI1P17947 270 aa7.32□□□□□ -1.24
NUP54-211ENST00000512151 CHATP28329 748 aa7.32□□□□□ -1.24
NUP54-211ENST00000512151 VDAC2P45880 294 aaPredicted RBP7.32□□□□□ -1.24
NUP54-211ENST00000512151 RAB13P51153 203 aa7.32□□□□□ -1.24
NUP54-211ENST00000512151 SLC25A1P53007 311 aa7.32□□□□□ -1.24
NUP54-211ENST00000512151 GABARAPL2P60520 117 aa7.32□□□□□ -1.24
NUP54-211ENST00000512151 CDC42P60953 191 aa7.32□□□□□ -1.24
NUP54-211ENST00000512151 PCBD1P61457 104 aa7.32□□□□□ -1.24
NUP54-211ENST00000512151 LSAMPQ13449 338 aa7.32□□□□□ -1.24
NUP54-211ENST00000512151 CNN3Q15417 329 aaKnown RBP7.32□□□□□ -1.24
NUP54-211ENST00000512151 KCNJ8Q15842 424 aa7.32□□□□□ -1.24
NUP54-211ENST00000512151 AANATQ16613 207 aa7.32□□□□□ -1.24
NUP54-211ENST00000512151 C11orf91Q3C1V1 193 aa7.32□□□□□ -1.24
NUP54-211ENST00000512151 LIAT1Q6ZQX7 453 aa7.32□□□□□ -1.24
NUP54-211ENST00000512151 ZNF826PQ6ZT77 177 aa7.32□□□□□ -1.24
NUP54-211ENST00000512151 HDDC2Q7Z4H3 204 aa7.32□□□□□ -1.24
NUP54-211ENST00000512151 CMTM4Q8IZR5 234 aa7.32□□□□□ -1.24
NUP54-211ENST00000512151 DYNAPQ8N1N2 210 aa7.32□□□□□ -1.24
NUP54-211ENST00000512151 FAM216BQ8N7L0 139 aa7.32□□□□□ -1.24
NUP54-211ENST00000512151 CELF2-AS1Q8N7Q2 184 aa7.32□□□□□ -1.24
NUP54-211ENST00000512151 RHOXF1Q8NHV9 184 aa7.32□□□□□ -1.24
NUP54-211ENST00000512151 FBLIM1Q8WUP2 373 aa7.32□□□□□ -1.24
NUP54-211ENST00000512151 ERGIC1Q969X5 290 aa7.32□□□□□ -1.24
NUP54-211ENST00000512151 OTULINQ96BN8 352 aa7.32□□□□□ -1.24
NUP54-211ENST00000512151 CCL13Q99616 98 aa7.32□□□□□ -1.24
NUP54-211ENST00000512151 OR51V1Q9H2C8 321 aa7.32□□□□□ -1.24
NUP54-211ENST00000512151 RERGLQ9H628 205 aa7.32□□□□□ -1.24
NUP54-211ENST00000512151 VCX3AQ9NNX9 186 aa7.32□□□□□ -1.24
NUP54-211ENST00000512151 TMEM100Q9NV29 134 aa7.32□□□□□ -1.24
NUP54-211ENST00000512151 MRPL22Q9NWU5 206 aaKnown RBP7.32□□□□□ -1.24
NUP54-211ENST00000512151 KAAG1Q9UBP8 84 aa7.32□□□□□ -1.24
NUP54-211ENST00000512151 ABCA13Q86UQ4 5058 aa7.31□□□□□ -1.24
NUP54-211ENST00000512151 DNAH10Q8IVF4 4471 aa7.31□□□□□ -1.24
NUP54-211ENST00000512151 A6NDX4 124 aa7.31□□□□□ -1.24
NUP54-211ENST00000512151 TVP23AA6NH52 213 aa7.31□□□□□ -1.24
NUP54-211ENST00000512151 ENTPD6O75354 484 aa7.31□□□□□ -1.24
NUP54-211ENST00000512151 PEX14O75381 377 aa7.31□□□□□ -1.24
NUP54-211ENST00000512151 KHDRBS3O75525 346 aaKnown RBP7.31□□□□□ -1.24
NUP54-211ENST00000512151 JUNBP17275 347 aaPredicted RBP7.31□□□□□ -1.24
NUP54-211ENST00000512151 AMY2BP19961 511 aa7.31□□□□□ -1.24
NUP54-211ENST00000512151 SMCPP49901 116 aaPredicted RBP7.31□□□□□ -1.24
NUP54-211ENST00000512151 SNRPGP62308 76 aaKnown RBP7.31□□□□□ -1.24
NUP54-211ENST00000512151 IL5RAQ01344 420 aa7.31□□□□□ -1.24
NUP54-211ENST00000512151 SMN1Q16637 294 aaKnown RBP7.31□□□□□ -1.24
NUP54-211ENST00000512151 MEP1BQ16820 701 aa7.31□□□□□ -1.24
NUP54-211ENST00000512151 PLA1AQ53H76 456 aa7.31□□□□□ -1.24
NUP54-211ENST00000512151 NXNL2Q5VZ03 156 aa7.31□□□□□ -1.24
NUP54-211ENST00000512151 ZNF773Q6PK81 442 aa7.31□□□□□ -1.24
NUP54-211ENST00000512151 GCSAMQ8N6F7 178 aa7.31□□□□□ -1.24
NUP54-211ENST00000512151 DTX3Q8N9I9 347 aa7.31□□□□□ -1.24
NUP54-211ENST00000512151 ZNF511Q8NB15 262 aa7.31□□□□□ -1.24
NUP54-211ENST00000512151 OR8J1Q8NGP2 316 aa7.31□□□□□ -1.24
NUP54-211ENST00000512151 CNIH3Q8TBE1 160 aa7.31□□□□□ -1.24
NUP54-211ENST00000512151 FNDC8Q8TC99 324 aa7.31□□□□□ -1.24
NUP54-211ENST00000512151 TRUB1Q8WWH5 349 aaKnown RBP7.31□□□□□ -1.24
NUP54-211ENST00000512151 SEH1LQ96EE3 360 aa7.31□□□□□ -1.24
NUP54-211ENST00000512151 TEAD3Q99594 435 aa7.31□□□□□ -1.24
NUP54-211ENST00000512151 PRSS22Q9GZN4 317 aa7.31□□□□□ -1.24
NUP54-211ENST00000512151 TRIM36Q9NQ86 728 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms