RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 ECH1Q13011 328 aa5.4□□□□□ -1.54
COPS4-209ENST00000511653 FAM189A2Q15884 450 aa5.4□□□□□ -1.54
COPS4-209ENST00000511653 C8orf82Q6P1X6 216 aaPredicted RBP5.4□□□□□ -1.54
COPS4-209ENST00000511653 C1orf122Q6ZSJ8 110 aa5.4□□□□□ -1.54
COPS4-209ENST00000511653 AMIGO2Q86SJ2 522 aa5.4□□□□□ -1.54
COPS4-209ENST00000511653 CYP4Z1Q86W10 505 aa5.4□□□□□ -1.54
COPS4-209ENST00000511653 LYG1Q8N1E2 194 aa5.4□□□□□ -1.54
COPS4-209ENST00000511653 GALNT4Q8N4A0 578 aa5.4□□□□□ -1.54
COPS4-209ENST00000511653 OR51L1Q8NGJ5 315 aa5.4□□□□□ -1.54
COPS4-209ENST00000511653 OR2AJ1Q8NGZ0 328 aa5.4□□□□□ -1.54
COPS4-209ENST00000511653 LRRC29Q8WV35 223 aa5.4□□□□□ -1.54
COPS4-209ENST00000511653 C17orf50Q8WW18 174 aa5.4□□□□□ -1.54
COPS4-209ENST00000511653 FAM162AQ96A26 154 aa5.4□□□□□ -1.54
COPS4-209ENST00000511653 IFT27Q9BW83 186 aa5.4□□□□□ -1.54
COPS4-209ENST00000511653 SLC22A4Q9H015 551 aa5.4□□□□□ -1.54
COPS4-209ENST00000511653 PPA2Q9H2U2 334 aa5.4□□□□□ -1.54
COPS4-209ENST00000511653 DPAGT1Q9H3H5 408 aa5.4□□□□□ -1.54
COPS4-209ENST00000511653 MRPL15Q9P015 296 aaKnown RBP5.4□□□□□ -1.54
COPS4-209ENST00000511653 FAM96BQ9Y3D0 163 aa5.4□□□□□ -1.54
COPS4-209ENST00000511653 N6AMT1Q9Y5N5 214 aa5.4□□□□□ -1.54
COPS4-209ENST00000511653 V9GYQ6 96 aa5.4□□□□□ -1.54
COPS4-209ENST00000511653 MEIOCA2RUB1 952 aa5.4□□□□□ -1.55
COPS4-209ENST00000511653 BHLHE40O14503 412 aa5.4□□□□□ -1.55
COPS4-209ENST00000511653 ECDO95905 644 aaPredicted RBP5.4□□□□□ -1.55
COPS4-209ENST00000511653 OPN1MWP04001 364 aa5.4□□□□□ -1.55
COPS4-209ENST00000511653 HNRNPCP07910 306 aaKnown RBP eCLIP5.4□□□□□ -1.55
COPS4-209ENST00000511653 OPN1MW2P0DN77 364 aa5.4□□□□□ -1.55
COPS4-209ENST00000511653 OPN1MW3P0DN78 364 aa5.4□□□□□ -1.55
COPS4-209ENST00000511653 TROVE2P10155 538 aaKnown RBP eCLIP5.4□□□□□ -1.55
COPS4-209ENST00000511653 SLC6A6P31641 620 aa5.4□□□□□ -1.55
COPS4-209ENST00000511653 GABRA5P31644 462 aa5.4□□□□□ -1.55
COPS4-209ENST00000511653 GMFBP60983 142 aa5.4□□□□□ -1.55
COPS4-209ENST00000511653 HERPUD1Q15011 391 aa5.4□□□□□ -1.55
COPS4-209ENST00000511653 ZSCAN26Q16670 478 aa5.4□□□□□ -1.55
COPS4-209ENST00000511653 SLC36A3Q495N2 470 aa5.4□□□□□ -1.55
COPS4-209ENST00000511653 METAP1DQ6UB28 335 aaPredicted RBP5.4□□□□□ -1.55
COPS4-209ENST00000511653 WDR82Q6UXN9 313 aa5.4□□□□□ -1.55
COPS4-209ENST00000511653 ARPINQ7Z6K5 226 aa5.4□□□□□ -1.55
COPS4-209ENST00000511653 CYB561A3Q8NBI2 242 aa5.4□□□□□ -1.55
COPS4-209ENST00000511653 OR5T2Q8NGG2 359 aa5.4□□□□□ -1.55
COPS4-209ENST00000511653 SPTSSAQ969W0 71 aa5.4□□□□□ -1.55
COPS4-209ENST00000511653 DCTN5Q9BTE1 182 aa5.4□□□□□ -1.55
COPS4-209ENST00000511653 KRTAP9-9Q9BYP9 154 aa5.4□□□□□ -1.55
COPS4-209ENST00000511653 KRTAP9-4Q9BYQ2 154 aa5.4□□□□□ -1.55
COPS4-209ENST00000511653 NSRP1Q9H0G5 558 aaKnown RBP5.4□□□□□ -1.55
COPS4-209ENST00000511653 WDR13Q9H1Z4 485 aa5.4□□□□□ -1.55
COPS4-209ENST00000511653 HSF4Q9ULV5 492 aa5.4□□□□□ -1.55
COPS4-209ENST00000511653 PRPF19Q9UMS4 504 aaKnown RBP5.4□□□□□ -1.55
COPS4-209ENST00000511653 NOP16Q9Y3C1 178 aaKnown RBP5.4□□□□□ -1.55
COPS4-209ENST00000511653 COMMD3-BMI1R4GMX3 469 aa5.4□□□□□ -1.55
COPS4-209ENST00000511653 BTBD17A6NE02 478 aa5.39□□□□□ -1.55
COPS4-209ENST00000511653 ANKRD61A6NGH8 418 aa5.39□□□□□ -1.55
COPS4-209ENST00000511653 H3BUX3 64 aa5.39□□□□□ -1.55
COPS4-209ENST00000511653 COX4I1P13073 169 aa5.39□□□□□ -1.55
COPS4-209ENST00000511653 DUSP1P28562 367 aa5.39□□□□□ -1.55
COPS4-209ENST00000511653 TGFBR2P37173 567 aa5.39□□□□□ -1.55
COPS4-209ENST00000511653 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.39□□□□□ -1.55
COPS4-209ENST00000511653 LY6EQ16553 131 aa5.39□□□□□ -1.55
COPS4-209ENST00000511653 DGUOKQ16854 277 aa5.39□□□□□ -1.55
COPS4-209ENST00000511653 MICBQ29980 383 aa5.39□□□□□ -1.55
COPS4-209ENST00000511653 KLHL12Q53G59 568 aa5.39□□□□□ -1.55
COPS4-209ENST00000511653 STUMQ69YW2 141 aa5.39□□□□□ -1.55
COPS4-209ENST00000511653 HCP5Q6MZN7 132 aa5.39□□□□□ -1.55
COPS4-209ENST00000511653 DRAM2Q6UX65 266 aa5.39□□□□□ -1.55
COPS4-209ENST00000511653 SLC16A9Q7RTY1 509 aa5.39□□□□□ -1.55
COPS4-209ENST00000511653 DCXRQ7Z4W1 244 aa5.39□□□□□ -1.55
COPS4-209ENST00000511653 ZDHHC21Q8IVQ6 265 aa5.39□□□□□ -1.55
COPS4-209ENST00000511653 KLHDC1Q8N7A1 406 aa5.39□□□□□ -1.55
COPS4-209ENST00000511653 PROKR2Q8NFJ6 384 aa5.39□□□□□ -1.55
COPS4-209ENST00000511653 OR1M1Q8NGA1 313 aa5.39□□□□□ -1.55
COPS4-209ENST00000511653 OR9Q1Q8NGQ5 310 aa5.39□□□□□ -1.55
COPS4-209ENST00000511653 H1FXQ92522 213 aaKnown RBP5.39□□□□□ -1.55
COPS4-209ENST00000511653 RORBQ92753 470 aa5.39□□□□□ -1.55
COPS4-209ENST00000511653 DDOQ99489 341 aa5.39□□□□□ -1.55
COPS4-209ENST00000511653 KCTD14Q9BQ13 255 aaPredicted RBP5.39□□□□□ -1.55
COPS4-209ENST00000511653 COPS4Q9BT78 406 aa5.39□□□□□ -1.55
COPS4-209ENST00000511653 KLK15Q9H2R5 256 aa5.39□□□□□ -1.55
COPS4-209ENST00000511653 EGLN3Q9H6Z9 239 aa5.39□□□□□ -1.55
COPS4-209ENST00000511653 ELL3Q9HB65 397 aaPredicted RBP5.39□□□□□ -1.55
COPS4-209ENST00000511653 SNTG1Q9NSN8 517 aa5.39□□□□□ -1.55
COPS4-209ENST00000511653 ABCD2Q9UBJ2 740 aa5.39□□□□□ -1.55
COPS4-209ENST00000511653 FAM32AQ9Y421 112 aaKnown RBP5.39□□□□□ -1.55
COPS4-209ENST00000511653 SACSQ9NZJ4 4579 aa5.39□□□□□ -1.55
COPS4-209ENST00000511653 KIAA2026Q5HYC2 2103 aa5.38□□□□□ -1.55
COPS4-209ENST00000511653 HUWE1Q7Z6Z7 4374 aaKnown RBP5.38□□□□□ -1.55
COPS4-209ENST00000511653 hCG_38984A0A1B0GV85 526 aa5.38□□□□□ -1.55
COPS4-209ENST00000511653 CDIPTO14735 213 aa5.38□□□□□ -1.55
COPS4-209ENST00000511653 CHST1O43916 411 aa5.38□□□□□ -1.55
COPS4-209ENST00000511653 PAHP00439 452 aa5.38□□□□□ -1.55
COPS4-209ENST00000511653 SEMG1P04279 462 aa5.38□□□□□ -1.55
COPS4-209ENST00000511653 GYPBP06028 91 aa5.38□□□□□ -1.55
COPS4-209ENST00000511653 SPARCP09486 303 aa5.38□□□□□ -1.55
COPS4-209ENST00000511653 MUC1P15941 1255 aaPredicted RBP5.38□□□□□ -1.55
COPS4-209ENST00000511653 ZNF823P16415 610 aa5.38□□□□□ -1.55
COPS4-209ENST00000511653 EEF1B2P24534 225 aaKnown RBP5.38□□□□□ -1.55
COPS4-209ENST00000511653 GSSP48637 474 aa5.38□□□□□ -1.55
COPS4-209ENST00000511653 TGM4P49221 684 aa5.38□□□□□ -1.55
COPS4-209ENST00000511653 NUDT2P50583 147 aa5.38□□□□□ -1.55
COPS4-209ENST00000511653 FAM3AP98173 230 aa5.38□□□□□ -1.55
COPS4-209ENST00000511653 SPIBQ01892 262 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms