RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 CRMP1Q14194 572 aa11.16□□□□□ -0.62
DDR1-260ENST00000507533 LHFPL4Q7Z7J7 247 aa11.16□□□□□ -0.62
DDR1-260ENST00000507533 DYNAPQ8N1N2 210 aa11.16□□□□□ -0.62
DDR1-260ENST00000507533 SLC26A10Q8NG04 563 aa11.16□□□□□ -0.62
DDR1-260ENST00000507533 OR2T4Q8NH00 348 aa11.16□□□□□ -0.62
DDR1-260ENST00000507533 RPS4Y2Q8TD47 263 aa11.16□□□□□ -0.62
DDR1-260ENST00000507533 ASCL2Q99929 193 aa11.16□□□□□ -0.62
DDR1-260ENST00000507533 TEX12Q9BXU0 123 aa11.16□□□□□ -0.62
DDR1-260ENST00000507533 WDR13Q9H1Z4 485 aa11.16□□□□□ -0.62
DDR1-260ENST00000507533 CYB5R1Q9UHQ9 305 aa11.16□□□□□ -0.62
DDR1-260ENST00000507533 ENOPH1Q9UHY7 261 aa11.16□□□□□ -0.62
DDR1-260ENST00000507533 N6AMT1Q9Y5N5 214 aa11.16□□□□□ -0.62
DDR1-260ENST00000507533 SIGLEC5O15389 551 aa11.15□□□□□ -0.62
DDR1-260ENST00000507533 BAG2O95816 211 aa11.15□□□□□ -0.62
DDR1-260ENST00000507533 ACAA1P09110 424 aaPredicted RBP11.15□□□□□ -0.62
DDR1-260ENST00000507533 COX7A1P24310 79 aa11.15□□□□□ -0.62
DDR1-260ENST00000507533 DDOSTP39656 456 aa11.15□□□□□ -0.62
DDR1-260ENST00000507533 SLC25A1P53007 311 aa11.15□□□□□ -0.62
DDR1-260ENST00000507533 DGCR2P98153 550 aa11.15□□□□□ -0.62
DDR1-260ENST00000507533 PTGES3Q15185 160 aaKnown RBP11.15□□□□□ -0.62
DDR1-260ENST00000507533 TMEM236Q5W0B7 351 aa11.15□□□□□ -0.62
DDR1-260ENST00000507533 UNQ9370/PRO34162Q6UXP9 181 aa11.15□□□□□ -0.62
DDR1-260ENST00000507533 ANGPTL6Q8NI99 470 aa11.15□□□□□ -0.62
DDR1-260ENST00000507533 CIB1Q99828 191 aa11.15□□□□□ -0.62
DDR1-260ENST00000507533 NMNAT2Q9BZQ4 307 aa11.15□□□□□ -0.62
DDR1-260ENST00000507533 USE1Q9NZ43 259 aa11.15□□□□□ -0.62
DDR1-260ENST00000507533 ZMAT5Q9UDW3 170 aaKnown RBP11.15□□□□□ -0.62
DDR1-260ENST00000507533 FAM90A8PA6NJQ4 464 aa11.14□□□□□ -0.63
DDR1-260ENST00000507533 PYCR1P32322 319 aa11.14□□□□□ -0.63
DDR1-260ENST00000507533 GABRA2P47869 451 aa11.14□□□□□ -0.63
DDR1-260ENST00000507533 KHDC1LQ5JSQ8 128 aa11.14□□□□□ -0.63
DDR1-260ENST00000507533 DRAM2Q6UX65 266 aa11.14□□□□□ -0.63
DDR1-260ENST00000507533 MRPL41Q8IXM3 137 aaKnown RBP11.14□□□□□ -0.63
DDR1-260ENST00000507533 PROKR2Q8NFJ6 384 aa11.14□□□□□ -0.63
DDR1-260ENST00000507533 TFAP2CQ92754 450 aa11.14□□□□□ -0.63
DDR1-260ENST00000507533 MCRIP2Q9BUT9 160 aaKnown RBP11.14□□□□□ -0.63
DDR1-260ENST00000507533 C9orf16Q9BUW7 83 aa11.14□□□□□ -0.63
DDR1-260ENST00000507533 TLNRD1Q9H1K6 362 aa11.14□□□□□ -0.63
DDR1-260ENST00000507533 OPA3Q9H6K4 179 aa11.14□□□□□ -0.63
DDR1-260ENST00000507533 ZAR1LA6NP61 321 aa11.13□□□□□ -0.63
DDR1-260ENST00000507533 EI24O14681 340 aa11.13□□□□□ -0.63
DDR1-260ENST00000507533 RHBDL1O75783 438 aa11.13□□□□□ -0.63
DDR1-260ENST00000507533 ALPLP05186 524 aa11.13□□□□□ -0.63
DDR1-260ENST00000507533 SPI1P17947 270 aa11.13□□□□□ -0.63
DDR1-260ENST00000507533 EPHA2P29317 976 aa11.13□□□□□ -0.63
DDR1-260ENST00000507533 ALDH3A2P51648 485 aa11.13□□□□□ -0.63
DDR1-260ENST00000507533 SNAPC1Q16533 368 aa11.13□□□□□ -0.63
DDR1-260ENST00000507533 SLX4IPQ5VYV7 408 aa11.13□□□□□ -0.63
DDR1-260ENST00000507533 CBR4Q8N4T8 237 aa11.13□□□□□ -0.63
DDR1-260ENST00000507533 ZNRF1Q8ND25 227 aa11.13□□□□□ -0.63
DDR1-260ENST00000507533 TMEM185AQ8NFB2 350 aa11.13□□□□□ -0.63
DDR1-260ENST00000507533 OR4X2Q8NGF9 303 aa11.13□□□□□ -0.63
DDR1-260ENST00000507533 OR10Z1Q8NGY1 313 aa11.13□□□□□ -0.63
DDR1-260ENST00000507533 ZNRF4Q8WWF5 429 aa11.13□□□□□ -0.63
DDR1-260ENST00000507533 GABARAPL3Q9BY60 117 aa11.13□□□□□ -0.63
DDR1-260ENST00000507533 PRRG3Q9BZD7 231 aa11.13□□□□□ -0.63
DDR1-260ENST00000507533 PPP1R3EQ9H7J1 279 aa11.13□□□□□ -0.63
DDR1-260ENST00000507533 C19orf12Q9NSK7 152 aa11.13□□□□□ -0.63
DDR1-260ENST00000507533 TVP23BQ9NYZ1 205 aa11.13□□□□□ -0.63
DDR1-260ENST00000507533 LSM4Q9Y4Z0 139 aaKnown RBP11.13□□□□□ -0.63
DDR1-260ENST00000507533 FAM183AA6NL82 134 aa11.12□□□□□ -0.63
DDR1-260ENST00000507533 OR2AT4A6NND4 320 aa11.12□□□□□ -0.63
DDR1-260ENST00000507533 PRR23D1E9PI22 279 aaPredicted RBP11.12□□□□□ -0.63
DDR1-260ENST00000507533 H0YHG0 523 aa11.12□□□□□ -0.63
DDR1-260ENST00000507533 AKR7A2O43488 359 aa11.12□□□□□ -0.63
DDR1-260ENST00000507533 GYPBP06028 91 aa11.12□□□□□ -0.63
DDR1-260ENST00000507533 PRR23D2P0DMB1 279 aaPredicted RBP11.12□□□□□ -0.63
DDR1-260ENST00000507533 CLUP10909 449 aa11.12□□□□□ -0.63
DDR1-260ENST00000507533 SLC2A1P11166 492 aa11.12□□□□□ -0.63
DDR1-260ENST00000507533 LYL1P12980 280 aa11.12□□□□□ -0.63
DDR1-260ENST00000507533 ZNF823P16415 610 aa11.12□□□□□ -0.63
DDR1-260ENST00000507533 FMO3P31513 532 aa11.12□□□□□ -0.63
DDR1-260ENST00000507533 OTX1P32242 354 aaPredicted RBP11.12□□□□□ -0.63
DDR1-260ENST00000507533 POLR2IP36954 125 aaKnown RBP11.12□□□□□ -0.63
DDR1-260ENST00000507533 GNALP38405 381 aa11.12□□□□□ -0.63
DDR1-260ENST00000507533 RPS27P42677 84 aaKnown RBP11.12□□□□□ -0.63
DDR1-260ENST00000507533 PRKXP51817 358 aa11.12□□□□□ -0.63
DDR1-260ENST00000507533 BLVRAP53004 296 aa11.12□□□□□ -0.63
DDR1-260ENST00000507533 ERVFRD-1P60508 538 aa11.12□□□□□ -0.63
DDR1-260ENST00000507533 SSX2Q16385 188 aa11.12□□□□□ -0.63
DDR1-260ENST00000507533 C12orf73Q69YU5 71 aa11.12□□□□□ -0.63
DDR1-260ENST00000507533 ZBTB49Q6ZSB9 765 aa11.12□□□□□ -0.63
DDR1-260ENST00000507533 CPOQ8IVL8 374 aa11.12□□□□□ -0.63
DDR1-260ENST00000507533 C11orf42Q8N5U0 333 aa11.12□□□□□ -0.63
DDR1-260ENST00000507533 Q8NFD4 153 aa11.12□□□□□ -0.63
DDR1-260ENST00000507533 OR51L1Q8NGJ5 315 aa11.12□□□□□ -0.63
DDR1-260ENST00000507533 RPL3LQ92901 407 aaKnown RBP11.12□□□□□ -0.63
DDR1-260ENST00000507533 SPSB4Q96A44 273 aa11.12□□□□□ -0.63
DDR1-260ENST00000507533 OTULINQ96BN8 352 aa11.12□□□□□ -0.63
DDR1-260ENST00000507533 FOXRED1Q96CU9 486 aaPredicted RBP11.12□□□□□ -0.63
DDR1-260ENST00000507533 RIBC2Q9H4K1 309 aa11.12□□□□□ -0.63
DDR1-260ENST00000507533 MED20Q9H944 212 aa11.12□□□□□ -0.63
DDR1-260ENST00000507533 PALMDQ9NP74 551 aa11.12□□□□□ -0.63
DDR1-260ENST00000507533 MRPL22Q9NWU5 206 aaKnown RBP11.12□□□□□ -0.63
DDR1-260ENST00000507533 NLKQ9UBE8 527 aa11.12□□□□□ -0.63
DDR1-260ENST00000507533 KCNG2Q9UJ96 466 aa11.12□□□□□ -0.63
DDR1-260ENST00000507533 ORC6Q9Y5N6 252 aa11.12□□□□□ -0.63
DDR1-260ENST00000507533 hCG_1809904A0A1W2PP81 198 aa11.11□□□□□ -0.63
DDR1-260ENST00000507533 A0A1W2PPE2 198 aa11.11□□□□□ -0.63
DDR1-260ENST00000507533 A0A1W2PPH5 198 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms