RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 RELBQ01201 579 aa11.83□□□□□ -0.52
HMGCS1-203ENST00000507004 TMEM42Q69YG0 159 aa11.83□□□□□ -0.52
HMGCS1-203ENST00000507004 C12orf73Q69YU5 71 aa11.83□□□□□ -0.52
HMGCS1-203ENST00000507004 KDM4DQ6B0I6 523 aa11.83□□□□□ -0.52
HMGCS1-203ENST00000507004 C11orf88Q6PI97 169 aa11.83□□□□□ -0.52
HMGCS1-203ENST00000507004 ACP7Q6ZNF0 438 aa11.83□□□□□ -0.52
HMGCS1-203ENST00000507004 Q6ZSR3 168 aa11.83□□□□□ -0.52
HMGCS1-203ENST00000507004 CALHM1Q8IU99 346 aa11.83□□□□□ -0.52
HMGCS1-203ENST00000507004 Q8N7P7 452 aa11.83□□□□□ -0.52
HMGCS1-203ENST00000507004 OR2T27Q8NH04 317 aa11.83□□□□□ -0.52
HMGCS1-203ENST00000507004 TNFRSF14Q92956 283 aa11.83□□□□□ -0.52
HMGCS1-203ENST00000507004 C10orf35Q96D05 121 aa11.83□□□□□ -0.52
HMGCS1-203ENST00000507004 DUS3LQ96G46 650 aaKnown RBP11.83□□□□□ -0.52
HMGCS1-203ENST00000507004 CADM1Q9BY67 442 aaKnown RBP11.83□□□□□ -0.52
HMGCS1-203ENST00000507004 FGF23Q9GZV9 251 aaPredicted RBP11.83□□□□□ -0.52
HMGCS1-203ENST00000507004 HEXA-AS1Q9H8Q6 139 aa11.83□□□□□ -0.52
HMGCS1-203ENST00000507004 ADGRL4Q9HBW9 690 aa11.83□□□□□ -0.52
HMGCS1-203ENST00000507004 RAB18Q9NP72 206 aa11.83□□□□□ -0.52
HMGCS1-203ENST00000507004 OR52A1Q9UKL2 312 aa11.83□□□□□ -0.52
HMGCS1-203ENST00000507004 GTF2A1LQ9UNN4 478 aa11.83□□□□□ -0.52
HMGCS1-203ENST00000507004 COPS3Q9UNS2 423 aa11.83□□□□□ -0.52
HMGCS1-203ENST00000507004 SLC7A11Q9UPY5 501 aa11.83□□□□□ -0.52
HMGCS1-203ENST00000507004 MAB21L2Q9Y586 359 aa11.83□□□□□ -0.52
HMGCS1-203ENST00000507004 AP4S1Q9Y587 144 aa11.83□□□□□ -0.52
HMGCS1-203ENST00000507004 V9GYS6 101 aa11.83□□□□□ -0.52
HMGCS1-203ENST00000507004 MEIOCA2RUB1 952 aa11.82□□□□□ -0.52
HMGCS1-203ENST00000507004 GATBO75879 557 aaKnown RBP11.82□□□□□ -0.52
HMGCS1-203ENST00000507004 SULT1C4O75897 302 aa11.82□□□□□ -0.52
HMGCS1-203ENST00000507004 TSPAN9O75954 239 aa11.82□□□□□ -0.52
HMGCS1-203ENST00000507004 PGA5P0DJD9 388 aa11.82□□□□□ -0.52
HMGCS1-203ENST00000507004 HAAOP46952 286 aa11.82□□□□□ -0.52
HMGCS1-203ENST00000507004 PDZD9Q8IXQ8 264 aa11.82□□□□□ -0.52
HMGCS1-203ENST00000507004 FGFRL1Q8N441 504 aa11.82□□□□□ -0.52
HMGCS1-203ENST00000507004 BEND2Q8NDZ0 799 aa11.82□□□□□ -0.52
HMGCS1-203ENST00000507004 OR8J1Q8NGP2 316 aa11.82□□□□□ -0.52
HMGCS1-203ENST00000507004 LINC01006Q8NI28 216 aa11.82□□□□□ -0.52
HMGCS1-203ENST00000507004 RFKQ969G6 155 aa11.82□□□□□ -0.52
HMGCS1-203ENST00000507004 ADI1Q9BV57 179 aa11.82□□□□□ -0.52
HMGCS1-203ENST00000507004 PKIBQ9C010 78 aa11.82□□□□□ -0.52
HMGCS1-203ENST00000507004 PLEKHA1Q9HB21 404 aa11.82□□□□□ -0.52
HMGCS1-203ENST00000507004 RFPL4AA6NLU0 287 aa11.81□□□□□ -0.52
HMGCS1-203ENST00000507004 RFPL4AL1F8VTS6 287 aa11.81□□□□□ -0.52
HMGCS1-203ENST00000507004 SRSF10O75494 262 aaKnown RBP11.81□□□□□ -0.52
HMGCS1-203ENST00000507004 NXPH2O95156 264 aa11.81□□□□□ -0.52
HMGCS1-203ENST00000507004 SERPINA3P01011 423 aa11.81□□□□□ -0.52
HMGCS1-203ENST00000507004 SELLP14151 372 aa11.81□□□□□ -0.52
HMGCS1-203ENST00000507004 CCL1P22362 96 aa11.81□□□□□ -0.52
HMGCS1-203ENST00000507004 MPZP25189 248 aa11.81□□□□□ -0.52
HMGCS1-203ENST00000507004 HTR1FP30939 366 aa11.81□□□□□ -0.52
HMGCS1-203ENST00000507004 PRDX2P32119 198 aa11.81□□□□□ -0.52
HMGCS1-203ENST00000507004 SAA4P35542 130 aa11.81□□□□□ -0.52
HMGCS1-203ENST00000507004 PROK1P58294 105 aa11.81□□□□□ -0.52
HMGCS1-203ENST00000507004 RPL31P62899 125 aaKnown RBP11.81□□□□□ -0.52
HMGCS1-203ENST00000507004 ELF3P78545 371 aaPredicted RBP11.81□□□□□ -0.52
HMGCS1-203ENST00000507004 C1orf146Q5VVC0 180 aa11.81□□□□□ -0.52
HMGCS1-203ENST00000507004 LIAT1Q6ZQX7 453 aa11.81□□□□□ -0.52
HMGCS1-203ENST00000507004 FAM185AQ8N0U4 392 aa11.81□□□□□ -0.52
HMGCS1-203ENST00000507004 ZNRF1Q8ND25 227 aa11.81□□□□□ -0.52
HMGCS1-203ENST00000507004 OR14K1Q8NGZ2 314 aa11.81□□□□□ -0.52
HMGCS1-203ENST00000507004 MYCBPQ99417 103 aaPredicted RBP11.81□□□□□ -0.52
HMGCS1-203ENST00000507004 NRIP2Q9BQI9 281 aa11.81□□□□□ -0.52
HMGCS1-203ENST00000507004 MMP27Q9H306 513 aa11.81□□□□□ -0.52
HMGCS1-203ENST00000507004 FAM53CQ9NYF3 392 aa11.81□□□□□ -0.52
HMGCS1-203ENST00000507004 USE1Q9NZ43 259 aa11.81□□□□□ -0.52
HMGCS1-203ENST00000507004 SLC22A13Q9Y226 551 aa11.81□□□□□ -0.52
HMGCS1-203ENST00000507004 PQLC2LA1A4F0 135 aa11.8□□□□□ -0.52
HMGCS1-203ENST00000507004 ANKRD61A6NGH8 418 aa11.8□□□□□ -0.52
HMGCS1-203ENST00000507004 WIPF1O43516 503 aa11.8□□□□□ -0.52
HMGCS1-203ENST00000507004 ATP6V1E1P36543 226 aa11.8□□□□□ -0.52
HMGCS1-203ENST00000507004 ERVFRD-1P60508 538 aa11.8□□□□□ -0.52
HMGCS1-203ENST00000507004 MFGE8Q08431 387 aaPredicted RBP11.8□□□□□ -0.52
HMGCS1-203ENST00000507004 IL24Q13007 206 aa11.8□□□□□ -0.52
HMGCS1-203ENST00000507004 TAF9Q16594 264 aa11.8□□□□□ -0.52
HMGCS1-203ENST00000507004 PLEKHG7Q6ZR37 379 aa11.8□□□□□ -0.52
HMGCS1-203ENST00000507004 YIPF7Q8N8F6 280 aa11.8□□□□□ -0.52
HMGCS1-203ENST00000507004 OR51G2Q8NGK0 314 aa11.8□□□□□ -0.52
HMGCS1-203ENST00000507004 TRUB1Q8WWH5 349 aaKnown RBP11.8□□□□□ -0.52
HMGCS1-203ENST00000507004 IL4I1Q96RQ9 567 aa11.8□□□□□ -0.52
HMGCS1-203ENST00000507004 APOL4Q9BPW4 351 aa11.8□□□□□ -0.52
HMGCS1-203ENST00000507004 MEGF9Q9H1U4 602 aa11.8□□□□□ -0.52
HMGCS1-203ENST00000507004 MRM2Q9UI43 246 aaKnown RBP11.8□□□□□ -0.52
HMGCS1-203ENST00000507004 A0A1B0GTI1 187 aa11.79□□□□□ -0.52
HMGCS1-203ENST00000507004 METTL15A6NJ78 407 aa11.79□□□□□ -0.52
HMGCS1-203ENST00000507004 PRR32B1ATL7 298 aa11.79□□□□□ -0.52
HMGCS1-203ENST00000507004 SYT7O43581 403 aa11.79□□□□□ -0.52
HMGCS1-203ENST00000507004 CIB2O75838 187 aa11.79□□□□□ -0.52
HMGCS1-203ENST00000507004 RBP4P02753 201 aa11.79□□□□□ -0.52
HMGCS1-203ENST00000507004 FUT6P51993 359 aa11.79□□□□□ -0.52
HMGCS1-203ENST00000507004 LGALS4P56470 323 aa11.79□□□□□ -0.52
HMGCS1-203ENST00000507004 CDC42P60953 191 aa11.79□□□□□ -0.52
HMGCS1-203ENST00000507004 Q6ZSV7 163 aa11.79□□□□□ -0.52
HMGCS1-203ENST00000507004 FAM220AQ7Z4H9 259 aa11.79□□□□□ -0.52
HMGCS1-203ENST00000507004 Q8IYB0 196 aa11.79□□□□□ -0.52
HMGCS1-203ENST00000507004 CENPNQ96H22 339 aaPredicted RBP11.79□□□□□ -0.52
HMGCS1-203ENST00000507004 RBM4BQ9BQ04 359 aaKnown RBP11.79□□□□□ -0.52
HMGCS1-203ENST00000507004 GABARAPL3Q9BY60 117 aa11.79□□□□□ -0.52
HMGCS1-203ENST00000507004 RANBP3Q9H6Z4 567 aaPredicted RBP11.79□□□□□ -0.52
HMGCS1-203ENST00000507004 SEBOXQ9HB31 216 aaPredicted RBP11.79□□□□□ -0.52
HMGCS1-203ENST00000507004 HES4Q9HCC6 221 aa11.79□□□□□ -0.52
HMGCS1-203ENST00000507004 TCF7L1Q9HCS4 588 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms