RNA–Protein interactions for RNA: ENST00000506909.5

PDCD6-204, Transcript of programmed cell death 6, humanhuman

TSL 3

Gene PDCD6, Length 458 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-204ENST00000506909 TMIGD2Q96BF3 282 aa11.26□□□□□ -0.61
PDCD6-204ENST00000506909 ADAT3Q96EY9 351 aaPredicted RBP11.26□□□□□ -0.61
PDCD6-204ENST00000506909 MED30Q96HR3 178 aa11.26□□□□□ -0.61
PDCD6-204ENST00000506909 CCL13Q99616 98 aa11.26□□□□□ -0.61
PDCD6-204ENST00000506909 NUDT16L1Q9BRJ7 211 aaKnown RBP11.26□□□□□ -0.61
PDCD6-204ENST00000506909 PKIBQ9C010 78 aa11.26□□□□□ -0.61
PDCD6-204ENST00000506909 SMURF1Q9HCE7 757 aa11.26□□□□□ -0.61
PDCD6-204ENST00000506909 PLCXD1Q9NUJ7 323 aa11.26□□□□□ -0.61
PDCD6-204ENST00000506909 NLKQ9UBE8 527 aa11.26□□□□□ -0.61
PDCD6-204ENST00000506909 POLDIP2Q9Y2S7 368 aa11.26□□□□□ -0.61
PDCD6-204ENST00000506909 SVEP1Q4LDE5 3571 aa11.25□□□□□ -0.61
PDCD6-204ENST00000506909 A0A0A6YYJ9 748 aa11.25□□□□□ -0.61
PDCD6-204ENST00000506909 TMEM212A6NML5 194 aa11.25□□□□□ -0.61
PDCD6-204ENST00000506909 OR2AT4A6NND4 320 aa11.25□□□□□ -0.61
PDCD6-204ENST00000506909 C22orf46C9J442 243 aa11.25□□□□□ -0.61
PDCD6-204ENST00000506909 E9PI62 339 aa11.25□□□□□ -0.61
PDCD6-204ENST00000506909 SYNGR1O43759 233 aa11.25□□□□□ -0.61
PDCD6-204ENST00000506909 ZFPL1O95159 310 aa11.25□□□□□ -0.61
PDCD6-204ENST00000506909 PGA5P0DJD9 388 aa11.25□□□□□ -0.61
PDCD6-204ENST00000506909 PIPP12273 146 aaPredicted RBP11.25□□□□□ -0.61
PDCD6-204ENST00000506909 ETV1P50549 477 aa11.25□□□□□ -0.61
PDCD6-204ENST00000506909 IL24Q13007 206 aa11.25□□□□□ -0.61
PDCD6-204ENST00000506909 MED21Q13503 144 aa11.25□□□□□ -0.61
PDCD6-204ENST00000506909 CNN3Q15417 329 aaKnown RBP11.25□□□□□ -0.61
PDCD6-204ENST00000506909 LAIR2Q6ISS4 152 aa11.25□□□□□ -0.61
PDCD6-204ENST00000506909 TMPRSS11AQ6ZMR5 421 aa11.25□□□□□ -0.61
PDCD6-204ENST00000506909 CALHM1Q8IU99 346 aa11.25□□□□□ -0.61
PDCD6-204ENST00000506909 ZNF676Q8N7Q3 588 aa11.25□□□□□ -0.61
PDCD6-204ENST00000506909 DNAAF1Q8NEP3 725 aa11.25□□□□□ -0.61
PDCD6-204ENST00000506909 OR5AK2Q8NH90 309 aa11.25□□□□□ -0.61
PDCD6-204ENST00000506909 GGHQ92820 318 aa11.25□□□□□ -0.61
PDCD6-204ENST00000506909 UPRTQ96BW1 309 aa11.25□□□□□ -0.61
PDCD6-204ENST00000506909 FGGYQ96C11 551 aa11.25□□□□□ -0.61
PDCD6-204ENST00000506909 TMEM80Q96HE8 168 aa11.25□□□□□ -0.61
PDCD6-204ENST00000506909 DMRTB1Q96MA1 342 aa11.25□□□□□ -0.61
PDCD6-204ENST00000506909 COMMD4Q9H0A8 199 aa11.25□□□□□ -0.61
PDCD6-204ENST00000506909 SNTG1Q9NSN8 517 aa11.25□□□□□ -0.61
PDCD6-204ENST00000506909 CNOT2Q9NZN8 540 aaKnown RBP11.25□□□□□ -0.61
PDCD6-204ENST00000506909 EXOSC1Q9Y3B2 195 aaKnown RBP11.25□□□□□ -0.61
PDCD6-204ENST00000506909 CUBNO60494 3623 aa11.24□□□□□ -0.61
PDCD6-204ENST00000506909 TRBV2A0A0J9YWF9 115 aa11.24□□□□□ -0.61
PDCD6-204ENST00000506909 FAM230AA0A1W2PPH8 454 aa11.24□□□□□ -0.61
PDCD6-204ENST00000506909 EFCAB10A6NFE3 127 aa11.24□□□□□ -0.61
PDCD6-204ENST00000506909 NDUFB3O43676 98 aa11.24□□□□□ -0.61
PDCD6-204ENST00000506909 PSG2P11465 335 aa11.24□□□□□ -0.61
PDCD6-204ENST00000506909 ZNF20P17024 532 aa11.24□□□□□ -0.61
PDCD6-204ENST00000506909 MYL12AP19105 171 aa11.24□□□□□ -0.61
PDCD6-204ENST00000506909 EPHA1P21709 976 aa11.24□□□□□ -0.61
PDCD6-204ENST00000506909 GMFBP60983 142 aa11.24□□□□□ -0.61
PDCD6-204ENST00000506909 ERVK11-1P61568 191 aa11.24□□□□□ -0.61
PDCD6-204ENST00000506909 ST3GAL4Q11206 333 aa11.24□□□□□ -0.61
PDCD6-204ENST00000506909 ARMCX4Q5H9R4 360 aa11.24□□□□□ -0.61
PDCD6-204ENST00000506909 RPL22L1Q6P5R6 122 aaKnown RBP11.24□□□□□ -0.61
PDCD6-204ENST00000506909 ACP7Q6ZNF0 438 aa11.24□□□□□ -0.61
PDCD6-204ENST00000506909 BTN2A1Q7KYR7 527 aa11.24□□□□□ -0.61
PDCD6-204ENST00000506909 FAM216BQ8N7L0 139 aa11.24□□□□□ -0.61
PDCD6-204ENST00000506909 PNLDC1Q8NA58 520 aaKnown RBP11.24□□□□□ -0.61
PDCD6-204ENST00000506909 OR51A4Q8NGJ6 313 aa11.24□□□□□ -0.61
PDCD6-204ENST00000506909 OR13C3Q8NGS6 347 aa11.24□□□□□ -0.61
PDCD6-204ENST00000506909 OR10AC1Q8NH08 325 aa11.24□□□□□ -0.61
PDCD6-204ENST00000506909 TRMT10AQ8TBZ6 339 aaKnown RBP11.24□□□□□ -0.61
PDCD6-204ENST00000506909 RPS4Y2Q8TD47 263 aa11.24□□□□□ -0.61
PDCD6-204ENST00000506909 BORCS8Q96FH0 119 aa11.24□□□□□ -0.61
PDCD6-204ENST00000506909 HES4Q9HCC6 221 aa11.24□□□□□ -0.61
PDCD6-204ENST00000506909 PSORS1C1Q9UIG5 152 aa11.24□□□□□ -0.61
PDCD6-204ENST00000506909 STAB1Q9NY15 2570 aa11.24□□□□□ -0.61
PDCD6-204ENST00000506909 IGKV1D-17A0A075B6S4 117 aa11.23□□□□□ -0.61
PDCD6-204ENST00000506909 IGKV1-27A0A075B6S5 117 aa11.23□□□□□ -0.61
PDCD6-204ENST00000506909 IGKV1-9A0A0C4DH69 117 aa11.23□□□□□ -0.61
PDCD6-204ENST00000506909 A0A1B0GW55 424 aa11.23□□□□□ -0.61
PDCD6-204ENST00000506909 NKX6-3A6NJ46 265 aa11.23□□□□□ -0.61
PDCD6-204ENST00000506909 SIGLEC5O15389 551 aa11.23□□□□□ -0.61
PDCD6-204ENST00000506909 TCF21O43680 179 aa11.23□□□□□ -0.61
PDCD6-204ENST00000506909 ALX3O95076 343 aa11.23□□□□□ -0.61
PDCD6-204ENST00000506909 DUX4L2P0CJ85 424 aa11.23□□□□□ -0.61
PDCD6-204ENST00000506909 DUX4L3P0CJ86 424 aa11.23□□□□□ -0.61
PDCD6-204ENST00000506909 DUX4L4P0CJ87 422 aa11.23□□□□□ -0.61
PDCD6-204ENST00000506909 DUX4L5P0CJ88 424 aa11.23□□□□□ -0.61
PDCD6-204ENST00000506909 DUX4L6P0CJ89 424 aa11.23□□□□□ -0.61
PDCD6-204ENST00000506909 DUX4L7P0CJ90 424 aa11.23□□□□□ -0.61
PDCD6-204ENST00000506909 ATF1P18846 271 aa11.23□□□□□ -0.61
PDCD6-204ENST00000506909 PRKACBP22694 351 aa11.23□□□□□ -0.61
PDCD6-204ENST00000506909 RBP2P50120 134 aa11.23□□□□□ -0.61
PDCD6-204ENST00000506909 GTF2A1P52655 376 aaPredicted RBP11.23□□□□□ -0.61
PDCD6-204ENST00000506909 ATP1B3P54709 279 aa11.23□□□□□ -0.61
PDCD6-204ENST00000506909 IL13RA1P78552 427 aa11.23□□□□□ -0.61
PDCD6-204ENST00000506909 TUSC1Q2TAM9 212 aa11.23□□□□□ -0.61
PDCD6-204ENST00000506909 SMIM21Q3B7S5 101 aa11.23□□□□□ -0.61
PDCD6-204ENST00000506909 LRRC10Q5BKY1 277 aa11.23□□□□□ -0.61
PDCD6-204ENST00000506909 KLF17Q5JT82 389 aaPredicted RBP11.23□□□□□ -0.61
PDCD6-204ENST00000506909 OR2G6Q5TZ20 316 aa11.23□□□□□ -0.61
PDCD6-204ENST00000506909 DUX4L9Q6RFH8 374 aaPredicted RBP11.23□□□□□ -0.61
PDCD6-204ENST00000506909 USP43Q70EL4 1123 aa11.23□□□□□ -0.61
PDCD6-204ENST00000506909 ANGPTL5Q86XS5 388 aa11.23□□□□□ -0.61
PDCD6-204ENST00000506909 PARP16Q8N5Y8 322 aa11.23□□□□□ -0.61
PDCD6-204ENST00000506909 OR52N1Q8NH53 320 aa11.23□□□□□ -0.61
PDCD6-204ENST00000506909 NPRL2Q8WTW4 380 aa11.23□□□□□ -0.61
PDCD6-204ENST00000506909 ST8SIA4Q92187 359 aa11.23□□□□□ -0.61
PDCD6-204ENST00000506909 SPSB1Q96BD6 273 aa11.23□□□□□ -0.61
PDCD6-204ENST00000506909 SDSLQ96GA7 329 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms