RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 J3QLI3 93 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 CCRL2O00421 344 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 PHYHO14832 338 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 PFDN6O15212 129 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 TGOLN2O43493 480 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 CA11O75493 328 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 ZNF189O75820 626 aaPredicted RBP1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 ISG15P05161 165 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 MRPL3P09001 348 aaKnown RBP1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 C8orf88P0DMB2 117 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 PSG2P11465 335 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 CRISP2P16562 243 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 UGT2B7P16662 529 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 PSMB9P28065 219 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 MYCNOSP40205 109 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 PPP1R2P41236 205 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 LHX2P50458 406 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 P2RX1P51575 399 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 FGF8P55075 233 aaPredicted RBP1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 OR10A3P58181 314 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 ARF6P62330 175 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 IL5RAQ01344 420 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 REG3AQ06141 175 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 SMARCB1Q12824 385 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 TSPAN31Q12999 210 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 FZD2Q14332 565 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 ZNF266Q14584 549 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 TMED2Q15363 201 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 SGCAQ16586 387 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 CLEC12BQ2HXU8 276 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 TBC1D28Q2M2D7 210 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 SLC25A35Q3KQZ1 300 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 TTMPQ5BVD1 217 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 CLVS2Q5SYC1 327 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 AVPI1Q5T686 147 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 CYB5R2Q6BCY4 276 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 SPOPLQ6IQ16 392 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 PPP1R2P3Q6NXS1 205 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 DNM1P34Q6PK57 102 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 UGT2A3Q6UWM9 527 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 USP50Q70EL3 339 aaPredicted RBP1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 SLC13A5Q86YT5 568 aaPredicted RBP1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 ENTHD1Q8IYW4 607 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 HS3ST5Q8IZT8 346 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 NPWQ8N729 165 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 ZNF433Q8N7K0 673 aaPredicted RBP1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 ARIH2OSQ8N7S6 290 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 CCDC54Q8NEL0 328 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 TTLQ8NG68 377 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 OR5D18Q8NGL1 313 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 OR1S1Q8NH92 325 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 PIGXQ8TBF5 258 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 PIFOQ8TCI5 191 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 BLOC1S5Q8TDH9 187 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 NELFBQ8WX92 580 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 RXFP2Q8WXD0 754 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 RGP1Q92546 391 aaPredicted RBP1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 CREB3L1Q96BA8 519 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 HAUS1Q96CS2 278 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 SMIM19Q96E16 107 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 AURKBQ96GD4 344 aaPredicted RBP1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 ZNF799Q96GE5 643 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 KCTD7Q96MP8 289 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 TMEM56Q96MV1 263 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 OR2M4Q96R27 311 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 STACQ99469 402 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 GPR22Q99680 433 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 SELENOSQ9BQE4 189 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 TOLLIPQ9H0E2 274 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 ARL6Q9H0F7 186 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 CENPHQ9H3R5 247 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 FAM49BQ9NUQ9 324 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 RBM22Q9NW64 420 aaKnown RBP eCLIP1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 DDIT4Q9NX09 232 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 TAS2R9Q9NYW1 312 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 UVRAGQ9P2Y5 699 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 MTFP1Q9UDX5 166 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 ANXA10Q9UJ72 324 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 TRAPPC4Q9Y296 219 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 TP53TG5Q9Y2B4 290 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 HES2Q9Y543 173 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 LRRC42Q9Y546 428 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 SNX10Q9Y5X0 201 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 C9orf84Q5VXU9 1444 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 TRBV6-6A0A0A6YYG2 114 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 CIB4A0PJX0 185 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 NKX2-6A6NCS4 301 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 TMEM114B3SHH9 223 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 PEX7O00628 323 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 MYL12BO14950 172 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 ACOX3O15254 700 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 BIRC5O15392 142 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 MAGEB4O15481 346 aaPredicted RBP1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 STX10O60499 249 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 ENTPD6O75354 484 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 DCTN3O75935 186 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 SOX14O95416 240 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 PCCAP05165 728 aaPredicted RBP1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 CDK1P06493 297 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 MMP7P09237 267 aaPredicted RBP1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms