RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 DOCK9Q9BZ29 2069 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 MYO10Q9HD67 2058 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 CCDC187A0A096LP49 1063 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 SPTY2D1-AS1A0A0U1RR47 76 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 LOC101059948A0A1B0GTJ6 334 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 TMEM235A6NFC5 223 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 LIPT2A6NK58 231 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 PRSS44E7EML9 344 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 CCSO14618 274 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 OR2T1O43869 369 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 LMX1BO60663 402 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 SLC16A7O60669 478 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 ICOSLGO75144 302 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 PLATP00750 562 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 IGHV4-34P06331 123 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 ACAA1P09110 424 aaPredicted RBP3.42□□□□□ -1.86
CLTC-209ENST00000498711 MUC1P15941 1255 aaPredicted RBP3.42□□□□□ -1.86
CLTC-209ENST00000498711 ZNF17P17021 662 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 CXCL12P48061 93 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 P2RY4P51582 365 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 FOXL2P58012 376 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 EIF5AP63241 154 aaKnown RBP3.42□□□□□ -1.86
CLTC-209ENST00000498711 HIST1H3AP68431 136 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 BLOC1S1P78537 153 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 SRSF5Q13243 272 aaKnown RBP3.42□□□□□ -1.86
CLTC-209ENST00000498711 EBPQ15125 230 aaKnown RBP3.42□□□□□ -1.86
CLTC-209ENST00000498711 FAM189A2Q15884 450 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 SGCAQ16586 387 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 PLAC9Q5JTB6 97 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 HIST2H3PS2Q5TEC6 136 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 TMEM71Q6P5X7 295 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 SLC25A47Q6Q0C1 308 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 CLEC18BQ6UXF7 455 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 Q6ZSR6 202 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 HIST2H3AQ71DI3 136 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 ZNF627Q7L945 461 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 MDGA2Q7Z553 956 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 ZNF614Q8N883 585 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 LRTM2Q8N967 370 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 AVL9Q8NBF6 648 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 INO80EQ8NBZ0 244 aaPredicted RBP3.42□□□□□ -1.86
CLTC-209ENST00000498711 PLPP5Q8NEB5 264 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 CCDC54Q8NEL0 328 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 OR4S1Q8NGB4 309 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 OR13C3Q8NGS6 347 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 OR8K3Q8NH51 312 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 SFT2D1Q8WV19 159 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 WDYHV1Q96HA8 205 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 SEC22AQ96IW7 307 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 MAP3K3Q99759 626 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 TPSD1Q9BZJ3 242 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 SELENOIQ9C0D9 397 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 CTDSP1Q9GZU7 261 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 SAV1Q9H4B6 383 aaPredicted RBP3.42□□□□□ -1.86
CLTC-209ENST00000498711 PNRC2Q9NPJ4 139 aaKnown RBP3.42□□□□□ -1.86
CLTC-209ENST00000498711 METTL1Q9UBP6 276 aaKnown RBP3.42□□□□□ -1.86
CLTC-209ENST00000498711 GHRLQ9UBU3 117 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 MMP17Q9ULZ9 603 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 WIF1Q9Y5W5 379 aa3.42□□□□□ -1.86
CLTC-209ENST00000498711 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.41□□□□□ -1.86
CLTC-209ENST00000498711 IGKV1D-43A0A0B4J1Z2 117 aa3.41□□□□□ -1.86
CLTC-209ENST00000498711 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.41□□□□□ -1.86
CLTC-209ENST00000498711 ANKUB1A6NFN9 424 aa3.41□□□□□ -1.86
CLTC-209ENST00000498711 MSGN1A6NI15 193 aa3.41□□□□□ -1.86
CLTC-209ENST00000498711 C17orf105B2RV13 164 aa3.41□□□□□ -1.86
CLTC-209ENST00000498711 C9JQL5 133 aa3.41□□□□□ -1.86
CLTC-209ENST00000498711 XKRYO14609 159 aa3.41□□□□□ -1.86
CLTC-209ENST00000498711 RAD51DO75771 328 aa3.41□□□□□ -1.86
CLTC-209ENST00000498711 ONECUT2O95948 504 aa3.41□□□□□ -1.86
CLTC-209ENST00000498711 CST4P01036 141 aa3.41□□□□□ -1.86
CLTC-209ENST00000498711 S100A8P05109 93 aa3.41□□□□□ -1.86
CLTC-209ENST00000498711 SMIM6P0DI80 62 aa3.41□□□□□ -1.86
CLTC-209ENST00000498711 GP1BBP13224 206 aa3.41□□□□□ -1.86
CLTC-209ENST00000498711 HIST1H1DP16402 221 aaKnown RBP3.41□□□□□ -1.86
CLTC-209ENST00000498711 ZNF708P17019 499 aa3.41□□□□□ -1.86
CLTC-209ENST00000498711 CXCR1P25024 350 aa3.41□□□□□ -1.86
CLTC-209ENST00000498711 APOBEC3AP31941 199 aaPredicted RBP3.41□□□□□ -1.86
CLTC-209ENST00000498711 HRH1P35367 487 aa3.41□□□□□ -1.86
CLTC-209ENST00000498711 RPS27P42677 84 aaKnown RBP3.41□□□□□ -1.86
CLTC-209ENST00000498711 DNASE1L1P49184 302 aa3.41□□□□□ -1.86
CLTC-209ENST00000498711 DVL1P1P54792 670 aaPredicted RBP3.41□□□□□ -1.86
CLTC-209ENST00000498711 ZNF121P58317 390 aaPredicted RBP3.41□□□□□ -1.86
CLTC-209ENST00000498711 BPIFB3P59826 476 aa3.41□□□□□ -1.86
CLTC-209ENST00000498711 GLO1Q04760 184 aa3.41□□□□□ -1.86
CLTC-209ENST00000498711 ANKRD55Q3KP44 614 aa3.41□□□□□ -1.86
CLTC-209ENST00000498711 DNLZQ5SXM8 178 aa3.41□□□□□ -1.86
CLTC-209ENST00000498711 PRAMEF17Q5VTA0 474 aa3.41□□□□□ -1.86
CLTC-209ENST00000498711 C11orf88Q6PI97 169 aa3.41□□□□□ -1.86
CLTC-209ENST00000498711 HAGHLQ6PII5 290 aaPredicted RBP3.41□□□□□ -1.86
CLTC-209ENST00000498711 DNM1P34Q6PK57 102 aa3.41□□□□□ -1.86
CLTC-209ENST00000498711 ASCL4Q6XD76 172 aa3.41□□□□□ -1.86
CLTC-209ENST00000498711 TMEM151BQ8IW70 566 aa3.41□□□□□ -1.86
CLTC-209ENST00000498711 C9orf40Q8IXQ3 194 aa3.41□□□□□ -1.86
CLTC-209ENST00000498711 GVQW1Q8N7I0 195 aa3.41□□□□□ -1.86
CLTC-209ENST00000498711 PNLDC1Q8NA58 520 aaKnown RBP3.41□□□□□ -1.86
CLTC-209ENST00000498711 OR52N4Q8NGI2 321 aa3.41□□□□□ -1.86
CLTC-209ENST00000498711 OR13G1Q8NGZ3 307 aa3.41□□□□□ -1.86
CLTC-209ENST00000498711 OR10G6Q8NH81 332 aa3.41□□□□□ -1.86
CLTC-209ENST00000498711 SLC25A43Q8WUT9 341 aaPredicted RBP3.41□□□□□ -1.86
CLTC-209ENST00000498711 GLMPQ8WWB7 406 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms