RNA–Protein interactions for RNA: ENST00000496818.2

CACNA1C-229, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2

Gene CACNA1C, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-229	ENST00000496818	CPEB3	Q8NE35	698 aa	Known RBP	4.89	□□□□□ -1.63
CACNA1C-229	ENST00000496818	ZNF680	Q8NEM1	530 aa		4.89	□□□□□ -1.63
CACNA1C-229	ENST00000496818	OR52L1	Q8NGH7	329 aa		4.89	□□□□□ -1.63
CACNA1C-229	ENST00000496818	OR10Z1	Q8NGY1	313 aa		4.89	□□□□□ -1.63
CACNA1C-229	ENST00000496818	NANP	Q8TBE9	248 aa		4.89	□□□□□ -1.63
CACNA1C-229	ENST00000496818	FANK1	Q8TC84	345 aa		4.89	□□□□□ -1.63
CACNA1C-229	ENST00000496818	HAVCR2	Q8TDQ0	301 aa		4.89	□□□□□ -1.63
CACNA1C-229	ENST00000496818	TMEM255B	Q8WV15	326 aa		4.89	□□□□□ -1.63
CACNA1C-229	ENST00000496818	PHYHIP	Q92561	330 aa		4.89	□□□□□ -1.63
CACNA1C-229	ENST00000496818	TMEM203	Q969S6	136 aa		4.89	□□□□□ -1.63
CACNA1C-229	ENST00000496818	SNX22	Q96L94	193 aa		4.89	□□□□□ -1.63
CACNA1C-229	ENST00000496818	SLC6A7	Q99884	636 aa		4.89	□□□□□ -1.63
CACNA1C-229	ENST00000496818	GAL3ST1	Q99999	423 aa		4.89	□□□□□ -1.63
CACNA1C-229	ENST00000496818	ZNF649	Q9BS31	505 aa		4.89	□□□□□ -1.63
CACNA1C-229	ENST00000496818	PTDSS2	Q9BVG9	487 aa		4.89	□□□□□ -1.63
CACNA1C-229	ENST00000496818	DNTTIP1	Q9H147	329 aa		4.89	□□□□□ -1.63
CACNA1C-229	ENST00000496818	MED28	Q9H204	178 aa		4.89	□□□□□ -1.63
CACNA1C-229	ENST00000496818	PPP1R3E	Q9H7J1	279 aa		4.89	□□□□□ -1.63
CACNA1C-229	ENST00000496818	ZNF665	Q9H7R5	613 aa		4.89	□□□□□ -1.63
CACNA1C-229	ENST00000496818	SAP30L	Q9HAJ7	183 aa		4.89	□□□□□ -1.63
CACNA1C-229	ENST00000496818	CDH20	Q9HBT6	801 aa		4.89	□□□□□ -1.63
CACNA1C-229	ENST00000496818	DECR2	Q9NUI1	292 aa		4.89	□□□□□ -1.63
CACNA1C-229	ENST00000496818	SLCO1C1	Q9NYB5	712 aa		4.89	□□□□□ -1.63
CACNA1C-229	ENST00000496818	TREM2	Q9NZC2	230 aa		4.89	□□□□□ -1.63
CACNA1C-229	ENST00000496818	B3GAT1	Q9P2W7	334 aa		4.89	□□□□□ -1.63
CACNA1C-229	ENST00000496818	NUFIP1	Q9UHK0	495 aa	Known RBP	4.89	□□□□□ -1.63
CACNA1C-229	ENST00000496818	SCP2D1	Q9UJQ7	156 aa		4.89	□□□□□ -1.63
CACNA1C-229	ENST00000496818	SLC7A7	Q9UM01	511 aa		4.89	□□□□□ -1.63
CACNA1C-229	ENST00000496818	FZR1	Q9UM11	496 aa		4.89	□□□□□ -1.63
CACNA1C-229	ENST00000496818	BAIAP2	Q9UQB8	552 aa		4.89	□□□□□ -1.63
CACNA1C-229	ENST00000496818	HSPB11	Q9Y547	144 aa		4.89	□□□□□ -1.63
CACNA1C-229	ENST00000496818	ALG5	Q9Y673	324 aa		4.89	□□□□□ -1.63
CACNA1C-229	ENST00000496818	COL6A5	A8TX70	2615 aa		4.89	□□□□□ -1.63
CACNA1C-229	ENST00000496818	IGHV1-69-2	A0A0G2JMI3	117 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	PLSCR5	A0PG75	271 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	C17orf100	A8MU93	164 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	GABRP	O00591	440 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	BHLHE40	O14503	412 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	CDC42EP2	O14613	210 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	PIP5K1C	O60331	668 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	FZD7	O75084	574 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	NCR1	O76036	304 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	OR6A2	O95222	327 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	ECD	O95905	644 aa	Predicted RBP	4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	ELANE	P08246	267 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	ZNF35	P13682	527 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	PRG2	P13727	222 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	ZNF14	P17017	642 aa	Predicted RBP	4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	EGR1	P18146	543 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	RAB3A	P20336	220 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	AHCY	P23526	432 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	AZGP1	P25311	298 aa	Known RBP	4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	HTR2A	P28223	471 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	RBM34	P42696	430 aa	Known RBP	4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	GPR4	P46093	362 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	TGM4	P49221	684 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	FLI1	Q01543	452 aa	Predicted RBP	4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	MXD1	Q05195	221 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	SLC3A1	Q07837	685 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	SCRN3	Q0VDG4	424 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	ZP4	Q12836	540 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	HFE	Q30201	348 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	SLC36A2	Q495M3	483 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	CD300E	Q496F6	205 aa	Predicted RBP	4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	AVPI1	Q5T686	147 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	FAM205BP	Q63HN1	556 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	SMARCD3	Q6STE5	483 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	UNQ6126/PRO20091	Q6UXV3	157 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	TMPRSS11F	Q6ZWK6	438 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	MEPCE	Q7L2J0	689 aa	Known RBP	4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	DPPA2	Q7Z7J5	298 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	C20orf196	Q8IYI0	205 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	LNX2	Q8N448	690 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	RNF152	Q8N8N0	203 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	SLC30A7	Q8NEW0	376 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	BBS1	Q8NFJ9	593 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	OR8H1	Q8NGG4	311 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	OR6S1	Q8NH40	331 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	ST7L	Q8TDW4	575 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	ZNF431	Q8TF32	576 aa	Predicted RBP	4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	TMEM239	Q8WW34	195 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	SPRYD4	Q8WW59	207 aa	Predicted RBP	4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	GIMAP1	Q8WWP7	306 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	RAB1C	Q92928	201 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	YIPF5	Q969M3	257 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	KTI12	Q96EK9	354 aa	Predicted RBP	4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	SAMD8	Q96LT4	415 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	C8orf49	Q96NF6	230 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	NEDD4L	Q96PU5	975 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	FYTTD1	Q96QD9	318 aa	Known RBP	4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	ATF6B	Q99941	703 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	PRSS27	Q9BQR3	290 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	BCL2L14	Q9BZR8	327 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	OR52D1	Q9H346	318 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	DPAGT1	Q9H3H5	408 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	HINT3	Q9NQE9	182 aa	Known RBP	4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	G6PC2	Q9NQR9	355 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	CMC2	Q9NRP2	79 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	MED29	Q9NX70	200 aa		4.88	□□□□□ -1.63
CACNA1C-229	ENST00000496818	BABAM2	Q9NXR7	383 aa		4.88	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms